Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168929757-15386-118714249090.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig122 Length=549
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|2495256|sp|Q39601|SSRP1_CATRO FACT complex subunit SSRP1 (... 170 3e-42 gi|75218951|sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1 ... 163 3e-40 gi|15228471|ref|NP_189515.1| ATHMG (HIGH MOBILITY GROUP); tra... 159 5e-39 gi|217853|dbj|BAA02719.1| high mobility group protein [Arabidops 156 4e-38 gi|479831|pir||S35511 high mobility group protein - Arabidopsis 156 4e-38 gi|75263808|sp|Q9LEF5|SSRP1_MAIZE FACT complex subunit SSRP1 ... 148 1e-35 gi|21314337|gb|AAM46895.1|AF503585_1 early drought induced pr... 147 3e-35 gi|115434958|ref|NP_001042237.1| Os01g0184900 [Oryza sativa (... 147 3e-35 gi|115462441|ref|NP_001054820.1| Os05g0182600 [Oryza sativa (... 144 2e-34 gi|18072795|emb|CAC80372.1| glyceraldehyde-3-phosphate dehydroge 129 7e-30 gi|10834738|gb|AAG23799.1| chloroplast NADP-dependent glycera... 129 7e-30 gi|18072797|emb|CAC80373.1| glyceraldehyde-3-phosphate dehydroge 127 3e-29 gi|15222111|ref|NP_172750.1| NAD binding / glyceraldehyde-3-p... 126 4e-29 gi|120659|sp|P09672|G3PA_SINAL Glyceraldehyde-3-phosphate deh... 126 4e-29 gi|109630058|gb|ABG35250.1| glyceraldehyde-3-phosphate dehydr... 126 6e-29 gi|109630066|gb|ABG35254.1| glyceraldehyde-3-phosphate dehydr... 126 6e-29 gi|109630092|gb|ABG35267.1| glyceraldehyde-3-phosphate dehydroge 126 6e-29 gi|73665947|gb|AAZ79661.1| putative glyceraldehyde 3-phosphat... 126 6e-29 gi|82167|pir||A24430 glyceraldehyde-3-phosphate dehydrogenase... 125 1e-28 gi|120661|sp|P09043|G3PA_TOBAC Glyceraldehyde-3-phosphate deh... 125 1e-28 gi|62318887|dbj|BAD93961.1| glyceraldehyde 3-phosphate dehydr... 124 2e-28 gi|166702|gb|AAD10209.1| glyceraldehyde 3-phosphate dehydroge... 124 2e-28 gi|166704|gb|AAA32793.1| glyceraldehyde 3-phosphate dehydroge... 124 2e-28 gi|30688425|ref|NP_566796.2| GAPA (GLYCERALDEHYDE 3-PHOSPHATE... 124 2e-28 gi|77540210|gb|ABA86963.1| glyceraldehyde-3-phosphate dehydro... 124 3e-28 gi|17942958|pdb|1JN0|O Chain O, Crystal Structure Of The Non-... 123 4e-28 gi|51247294|pdb|1RM3|O Chain O, Crystal Structure Of Mutant T... 123 5e-28 gi|51247300|pdb|1RM5|O Chain O, Crystal Structure Of Mutant S... 123 5e-28 gi|31615655|pdb|1NBO|O Chain O, The Dual Coenzyme Specificity... 123 5e-28 gi|66026|pir||DESPGA glyceraldehyde-3-phosphate dehydrogenase... 123 5e-28 gi|20455487|sp|P19866|G3PA_SPIOL Glyceraldehyde-3-phosphate d... 123 5e-28 gi|435103|gb|AAA33780.1| glyceraldehyde-phosphate dehydrogenase 122 8e-28 gi|120658|sp|P12858|G3PA_PEA Glyceraldehyde-3-phosphate dehyd... 121 1e-27 gi|20729|emb|CAA33264.1| unnamed protein product [Pisum sativum] 121 1e-27 gi|18076108|emb|CAC80394.1| glyceraldehyde-3-phosphate dehydroge 117 3e-26 gi|18076106|emb|CAC80393.1| glyceraldehyde-3-phosphate dehydroge 116 4e-26 gi|55847719|dbj|BAD72793.1| glyceraldehyde-3-phosphate dehydroge 116 4e-26 gi|18076100|emb|CAC80388.1| glyceraldehyde-3-phosphate dehydr... 116 6e-26 gi|22240|emb|CAA30152.1| GADPH (383 AA) [Zea mays] 115 1e-25 gi|168524|gb|AAA33485.1| glyceraldehyde-3-phosphate dehydrogenas 115 1e-25 gi|120657|sp|P09315|G3PA_MAIZE Glyceraldehyde-3-phosphate deh... 115 1e-25 gi|87330921|gb|ABD37958.1| glyceraldehyde-3-phosphate dehydro... 114 2e-25 gi|115458768|ref|NP_001052984.1| Os04g0459500 [Oryza sativa (... 114 2e-25 gi|87330936|gb|ABD37959.1| glyceraldehyde-3-phosphate dehydro... 114 3e-25 gi|87330969|gb|ABD37961.1| glyceraldehyde-3-phosphate dehydro... 113 5e-25 gi|87330988|gb|ABD37962.1| glyceraldehyde-3-phosphate dehydro... 112 8e-25 gi|18076104|emb|CAC80392.1| glyceraldehyde-3-phosphate dehydroge 111 2e-24 gi|7544132|dbj|BAA94304.1| NADP-glyceraldehyde-3-phosphate de... 111 2e-24 gi|87330950|gb|ABD37960.1| glyceraldehyde-3-phosphate dehydro... 110 4e-24 gi|87330898|gb|ABD37956.1| glyceraldehyde-3-phosphate dehydro... 109 5e-24 gi|79677457|emb|CAC80391.2| glyceraldehyde-3-phosphate dehydr... 109 5e-24 gi|17978190|emb|CAC81011.1| NADP-dependent glyceraldehyde-3-p... 106 5e-23 gi|87331007|gb|ABD37963.1| glyceraldehyde-3-phosphate dehydro... 105 8e-23 gi|82166|pir||B24430 glyceraldehyde-3-phosphate dehydrogenase... 105 1e-22 gi|120665|sp|P09044|G3PB_TOBAC Glyceraldehyde-3-phosphate deh... 105 1e-22 gi|87330881|gb|ABD37955.1| glyceraldehyde-3-phosphate dehydro... 105 1e-22 gi|18072799|emb|CAC80374.1| glyceraldehyde-3-phosphate dehydroge 104 2e-22 gi|77540212|gb|ABA86964.1| glyceraldehyde-3-phosphate dehydro... 102 7e-22 gi|20733|emb|CAA33262.1| unnamed protein product [Pisum sativum] 102 7e-22 gi|120663|sp|P12859|G3PB_PEA Glyceraldehyde-3-phosphate dehyd... 102 7e-22 gi|92875110|gb|ABE83250.1| Glyceraldehyde-3-phosphate dehydro... 102 9e-22 gi|87331054|gb|ABD37966.1| glyceraldehyde-3-phosphate dehydro... 100 3e-21 gi|116060251|emb|CAL56310.1| NADP-glyceraldehyde-3-phosphate ... 99.4 7e-21 gi|79677444|emb|CAC80378.2| glyceraldehyde-3-phosphate dehydroge 99.0 1e-20 gi|79677452|emb|CAC80389.2| glyceraldehyde-3-phosphate dehydr... 99.0 1e-20 gi|74272721|gb|ABA01156.1| chloroplast glyceraldehyde-3-phosp... 98.6 1e-20 gi|74272659|gb|ABA01125.1| chloroplast glyceraldehyde-3-phosp... 98.6 1e-20 gi|1730149|sp|P50362|G3PA_CHLRE Glyceraldehyde-3-phosphate de... 98.6 1e-20 gi|87330844|gb|ABD37953.1| glyceraldehyde-3-phosphate dehydro... 98.2 2e-20 gi|81621|pir||JQ1286 glyceraldehyde-3-phosphate dehydrogenase... 98.2 2e-20 gi|15217555|ref|NP_174996.1| GAPB (GLYCERALDEHYDE-3-PHOSPHATE... 98.2 2e-20 gi|87331025|gb|ABD37964.1| glyceraldehyde-3-phosphate dehydro... 97.4 3e-20 gi|108705994|gb|ABF93789.1| Glyceraldehyde-3-phosphate dehydr... 97.1 4e-20 gi|87330914|gb|ABD37957.1| glyceraldehyde-3-phosphate dehydro... 97.1 4e-20 gi|10834740|gb|AAG23800.1| chloroplast NADP-dependent glycera... 97.1 4e-20 gi|115450493|ref|NP_001048847.1| Os03g0129300 [Oryza sativa (... 97.1 4e-20 gi|87331042|gb|ABD37965.1| glyceraldehyde-3-phosphate dehydro... 94.4 2e-19 gi|116000380|emb|CAL50060.1| NADP-glyceraldehyde-3-phosphate ... 94.0 3e-19 gi|18073155|emb|CAC80390.1| glyceraldehyde-3-phosphate dehydroge 93.2 5e-19 gi|83271027|gb|ABC00187.1| chloroplast glyceraldehyde-3-phosp... 92.4 9e-19 gi|62319517|dbj|BAD94928.1| glyceraldehyde 3-phosphate dehydr... 91.3 2e-18 gi|120664|sp|P12860|G3PB_SPIOL Glyceraldehyde-3-phosphate deh... 90.5 3e-18 gi|116054804|emb|CAL56881.1| HMG box-containing protein (ISS) [O 64.3 3e-10 gi|74272661|gb|ABA01126.1| glyceraldehyde-3-phosphate dehydro... 50.8 3e-06 gi|120668|sp|P08477|G3PC_HORVU Glyceraldehyde-3-phosphate deh... 50.4 4e-06 gi|1346064|sp|P49644|G3PC_CHLRE Glyceraldehyde-3-phosphate de... 50.1 5e-06 gi|32478662|gb|AAP83583.1| cytosolic glyceraldehyde-3-phospha... 49.7 7e-06 gi|7579064|gb|AAF64241.1| cytosolic glyceraldehyde-3-phosphat... 48.9 1e-05 gi|3023812|sp|Q39769|G3PC_GINBI Glyceraldehyde-3-phosphate de... 48.9 1e-05 gi|24415114|gb|AAN59792.1| cytosolic glyceraldehyde-3-phospha... 48.1 2e-05 gi|115459078|ref|NP_001053139.1| Os04g0486600 [Oryza sativa (... 48.1 2e-05 gi|115447137|ref|NP_001047348.1| Os02g0601300 [Oryza sativa (... 48.1 2e-05 gi|20513383|dbj|BAB91472.1| glyceraldehyde-3-phosphate dehydroge 47.8 3e-05 gi|70673311|gb|AAZ06800.1| glyceraldehyde-3-phosphate dehydrogen 47.4 3e-05 gi|16226113|gb|AAL16077.1|AF421144_1 glyceraldehyde 3-phosphate 47.4 3e-05 gi|16304127|gb|AAL16930.1|AF421492_1 glyceraldehyde 3-phospha... 47.4 3e-05 gi|115469420|ref|NP_001058309.1| Os06g0666600 [Oryza sativa (... 47.4 3e-05 gi|33342046|dbj|BAC80257.1| glyceraldehyde-3-phosphate dehydroge 47.4 3e-05 gi|20513379|dbj|BAB91470.1| glyceraldehyde-3-phosphate dehydroge 47.4 3e-05 gi|115371630|gb|ABI96175.1| glyceraldehyde-3 phosphate dehydroge 47.0 4e-05
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 341 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 549 Length of database: 101054579 Length adjustment: 106 Effective length of query: 443 Effective length of database: 71019585 Effective search space: 5468508045 Effective search space used: 5468508045 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)