Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168929790-16752-205010234510.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig123 Length=720
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|21912927|emb|CAC84143.2| thioredoxin peroxidase [Nicotiana ta 404 1e-112 gi|15131688|emb|CAC48323.1| 2-Cys peroxiredoxin [Pisum sativum] 384 2e-106 gi|11558242|emb|CAC17803.1| peroxiredoxin [Phaseolus vulgaris... 382 6e-106 gi|21553667|gb|AAM62760.1| 2-cys peroxiredoxin-like protein [Ara 379 5e-105 gi|18415155|ref|NP_568166.1| antioxidant [Arabidopsis thalian... 378 1e-104 gi|9758409|dbj|BAB08951.1| 2-cys peroxiredoxin-like protein [Ara 378 1e-104 gi|13265490|gb|AAG40040.2|AF324689_1 AT5g06290 [Arabidopsis thal 376 5e-104 gi|15229806|ref|NP_187769.1| antioxidant [Arabidopsis thalian... 376 5e-104 gi|115446541|ref|NP_001047050.1| Os02g0537700 [Oryza sativa (... 374 2e-103 gi|11119229|gb|AAG30570.1|AF311863_1 2-Cys peroxiredoxin [Brassi 373 4e-103 gi|21592588|gb|AAM64537.1| putative 2-cys peroxiredoxin BAS1 ... 369 6e-102 gi|47027073|gb|AAT08751.1| 2-cys peroxiredoxin-like protein [Hya 367 2e-101 gi|3328221|gb|AAC78473.1| thioredoxin peroxidase [Secale cereale 366 4e-101 gi|3121825|sp|O24364|BAS1_SPIOL 2-cys peroxiredoxin BAS1, chl... 365 7e-101 gi|7242491|emb|CAA66484.2| 2-Cys peroxiredoxin [Arabidopsis thal 362 1e-99 gi|7339568|emb|CAB82860.1| 2-Cys-peroxiredoxin [Riccia fluitans] 360 4e-99 gi|1498198|emb|CAA63909.1| 2-Cys peroxiredoxin bas1 [Arabidop... 358 1e-98 gi|2499477|sp|Q96468|BAS1_HORVU 2-cys peroxiredoxin BAS1, chl... 353 4e-97 gi|2829687|sp|P80602|BAS1_WHEAT 2-cys peroxiredoxin BAS1, chl... 352 1e-96 gi|1076722|pir||S49173 hypothetical protein - barley (fragment) 349 7e-96 gi|6002472|gb|AAF00001.1|AF052202_1 2Cys-peroxiredoxin precursor 342 8e-94 gi|11120591|gb|AAG30934.1|AF312025_1 thioredoxin peroxidase [... 317 4e-86 gi|74272711|gb|ABA01151.1| chloroplast thioredoxin peroxidase [C 316 5e-86 gi|11995220|emb|CAC19677.1| peroxiredoxin [Chlamydomonas reinhar 304 2e-82 gi|116059461|emb|CAL55168.1| Alkyl hydroperoxide reductase, t... 289 6e-78 gi|38344034|emb|CAE01526.2| OJ991214_12.15 [Oryza sativa (jap... 226 5e-59 gi|115458328|ref|NP_001052764.1| Os04g0416400 [Oryza sativa (... 200 4e-51 gi|74272725|gb|ABA01158.1| chloroplast thioredoxin peroxidase [C 171 3e-42 gi|19423862|gb|AAL88710.1|AF484696_1 1-cys peroxiredoxin [Xeroph 104 4e-22 gi|115473617|ref|NP_001060407.1| Os07g0638300 [Oryza sativa (... 103 7e-22 gi|1710077|sp|P52572|REHY_HORVU Probable peroxiredoxin (Thior... 103 9e-22 gi|28393058|gb|AAO41963.1| putative peroxiredoxin [Arabidopsi... 99.8 9e-21 gi|15221082|ref|NP_175247.1| ATPER1; antioxidant [Arabidopsis... 99.8 9e-21 gi|971280|dbj|BAA09947.1| RAB24 protein [Oryza sativa (japonica 99.4 1e-20 gi|34539782|gb|AAQ74769.1| 1-Cys-peroxiredoxine [Triticum aestiv 99.0 2e-20 gi|12247762|gb|AAG50024.1|AF327046_1 1-Cys peroxiredoxin [Tritic 99.0 2e-20 gi|49618728|gb|AAT67997.1| 1-cys peroxiredoxin [Medicago truncat 95.1 2e-19 gi|1710076|sp|P52571|REHY_BROSE Probable peroxiredoxin (Thior... 93.6 7e-19 gi|7381260|gb|AAF61460.1|AF139817_1 peroxiredoxin antioxidant [B 91.3 3e-18 gi|6466096|gb|AAF12782.1|AF191099_1 1-Cys peroxiredoxin [Fagopyr 91.3 3e-18 gi|25990368|gb|AAN76502.1|AF320690_1 1-cys-peroxiredoxin [Brassi 88.2 3e-17 gi|109631648|gb|ABG35998.1| glutathione peroxidase [Helianthu... 85.5 2e-16 gi|42795441|gb|AAS46230.1| peroxiredoxin Q [Populus balsamife... 85.1 2e-16 gi|55833012|gb|AAV66923.1| peroxiredoxin Q [Triticum aestivum] 84.3 4e-16 gi|109631652|gb|ABG36000.1| glutathione peroxidase [Helianthu... 84.0 5e-16 gi|109631700|gb|ABG36024.1| glutathione peroxidase [Helianthu... 84.0 5e-16 gi|109631672|gb|ABG36010.1| glutathione peroxidase [Helianthu... 84.0 5e-16 gi|109631620|gb|ABG35984.1| glutathione peroxidase [Helianthu... 84.0 5e-16 gi|109631696|gb|ABG36022.1| glutathione peroxidase [Helianthus a 83.6 7e-16 gi|115473619|ref|NP_001060408.1| Os07g0638400 [Oryza sativa (... 83.6 7e-16 gi|109631664|gb|ABG36006.1| glutathione peroxidase [Helianthu... 83.2 9e-16 gi|109631616|gb|ABG35982.1| glutathione peroxidase [Helianthu... 83.2 9e-16 gi|6899842|dbj|BAA90524.1| peroxiredoxin Q [Sedum lineare] 83.2 9e-16 gi|15230982|ref|NP_189235.1| antioxidant [Arabidopsis thalian... 83.2 9e-16 gi|109631628|gb|ABG35988.1| glutathione peroxidase [Helianthu... 82.8 1e-15 gi|109631668|gb|ABG36008.1| glutathione peroxidase [Helianthu... 82.8 1e-15 gi|109631584|gb|ABG35966.1| glutathione peroxidase [Helianthu... 82.8 1e-15 gi|1710079|sp|P52574|REHY_TORRU Probable peroxiredoxin (Thior... 82.4 2e-15 gi|109631592|gb|ABG35970.1| glutathione peroxidase [Helianthu... 82.0 2e-15 gi|109631590|gb|ABG35969.1| glutathione peroxidase [Helianthus a 82.0 2e-15 gi|109631596|gb|ABG35972.1| glutathione peroxidase [Helianthu... 81.6 3e-15 gi|109631600|gb|ABG35974.1| glutathione peroxidase [Helianthu... 79.7 1e-14 gi|34420838|gb|AAQ67661.1| peroxiredoxin Q [Suaeda salsa] 79.3 1e-14 gi|39748708|dbj|BAD04985.1| peroxiredoxin Q [Gentiana triflora] 79.0 2e-14 gi|115466906|ref|NP_001057052.1| Os06g0196300 [Oryza sativa (... 77.8 4e-14 gi|116055921|emb|CAL58454.1| Alkyl hydroperoxide reductase, t... 53.1 1e-06 gi|116000298|emb|CAL49978.1| Thioredoxin-like protein (ISS) [Ost 50.8 5e-06 gi|109818853|sp||P84729_1 [Segment 1 of 4] Putative 2-cys per... 40.0 0.009 gi|115444771|ref|NP_001046165.1| Os02g0192700 [Oryza sativa (... 36.6 0.098 gi|109818854|sp||P84729_2 [Segment 2 of 4] Putative 2-cys per... 35.4 0.22 gi|66360171|pdb|1TP9|A Chain A, Prx D (Type Ii) From Populus ... 33.9 0.64 gi|54306593|gb|AAV33451.1| 1-Cys peroxiredoxin [Fragaria x anana 32.0 2.4 gi|18654477|gb|AAL35363.2|AF442385_1 thioredoxin peroxidase [Cap 31.2 4.1 gi|115447957|ref|NP_001047758.1| Os02g0684100 [Oryza sativa (... 30.8 5.4 gi|92887828|gb|ABE89069.1| PWWP; Regulation of nuclear pre-mR... 30.8 5.4 gi|50251911|dbj|BAD27849.1| tRNA-splicing endonuclease positi... 30.8 5.4 gi|47497327|dbj|BAD19368.1| hypothetical protein [Oryza sativa ( 30.8 5.4
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 600 Number of extensions: 12 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 720 Length of database: 101054579 Length adjustment: 110 Effective length of query: 610 Effective length of database: 69886189 Effective search space: 9085204570 Effective search space used: 9085204570 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 66 (30.0 bits)