Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168930046-8773-72238152812.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig126 Length=58
Score E Sequences producing significant alignments: (Bits) Value gi|108707510|gb|ABF95305.1| NAD-dependent epimerase/dehydrata... 38.1 0.007 gi|60932236|gb|AAX37334.1| UDP-glucuronic acid decarboxylase 1 [ 38.1 0.007 gi|60932254|gb|AAX37335.1| UDP-glucuronic acid decarboxylase 2 [ 38.1 0.007 gi|92878321|gb|ABE84980.1| NAD-binding site; Nucleotide sugar... 38.1 0.007 gi|32401371|gb|AAP80857.1| dTDP-glucose-4-6-dehydratase-like pro 38.1 0.007 gi|15229334|ref|NP_191842.1| UXS2 (UDP-GLUCURONIC ACID DECARB... 38.1 0.007 gi|48093465|gb|AAT40109.1| putative UDP-glucuronate decarboxylas 38.1 0.007 gi|17473549|gb|AAL38251.1| dTDP-glucose 4-6-dehydratase-like ... 38.1 0.007 gi|50659030|gb|AAT80328.1| UDP-D-glucuronate decarboxylase [Hord 38.1 0.007 gi|30693847|ref|NP_190920.2| UXS1 (UDP-GLUCURONIC ACID DECARB... 38.1 0.007 gi|30693844|ref|NP_850694.1| UXS1 (UDP-GLUCURONIC ACID DECARB... 38.1 0.007 gi|15227109|ref|NP_182287.1| UXS4 (UDP-XYLOSE SYNTHASE 4); ca... 38.1 0.007 gi|115474027|ref|NP_001060612.1| Os07g0674100 [Oryza sativa (... 38.1 0.007 gi|115452277|ref|NP_001049739.1| Os03g0280800 [Oryza sativa (... 38.1 0.007 gi|13605583|gb|AAK32785.1|AF361617_1 AT3g62830/F26K9_260 [Ara... 38.1 0.007 gi|14595662|gb|AAK70880.1|AF387787_1 UDP-glucuronic acid deca... 38.1 0.007 gi|48093467|gb|AAT40110.1| putative UDP-glucuronate decarboxylas 37.7 0.009 gi|50659024|gb|AAT80325.1| UDP-D-glucuronate decarboxylase [Hord 37.7 0.009 gi|56201956|dbj|BAD73406.1| UDP-glucuronic acid decarboxylase... 37.7 0.009 gi|115440915|ref|NP_001044737.1| Os01g0837300 [Oryza sativa (... 37.7 0.009 gi|18201659|gb|AAL65400.1| dTDP-glucose 4-6-dehydratase-like pro 36.6 0.021 gi|50659028|gb|AAT80327.1| UDP-D-glucuronate decarboxylase [Hord 36.6 0.021 gi|115436236|ref|NP_001042876.1| Os01g0315800 [Oryza sativa (... 36.6 0.021 gi|116055038|emb|CAL57434.1| GDP-mannose 4,6 dehydratase (ISS) [ 35.8 0.035 gi|108707480|gb|ABF95275.1| RmlD substrate binding domain con... 35.8 0.035 gi|60932273|gb|AAX37336.1| UDP-glucuronic acid decarboxylase 3 [ 35.8 0.035 gi|6469141|emb|CAB61752.1| dTDP-glucose 4-6-dehydratase [Cicer a 35.8 0.035 gi|15231432|ref|NP_190228.1| UXS5; catalytic [Arabidopsis tha... 35.8 0.035 gi|15226950|ref|NP_180443.1| NAD binding / catalytic [Arabido... 35.8 0.035 gi|14030703|gb|AAK53026.1|AF375442_1 AT5g59290/mnc17_180 [Ara... 35.8 0.035 gi|48093463|gb|AAT40108.1| putative UDP-glucuronate decarboxylas 35.8 0.035 gi|2351580|gb|AAB68605.1| thymidine diphospho-glucose 4-6-deh... 35.8 0.035 gi|63192216|gb|AAY34938.1| putative nucleotide sugar epimerase [ 35.8 0.035 gi|50659026|gb|AAT80326.1| UDP-D-glucuronate decarboxylase [Hord 35.8 0.035 gi|13591616|dbj|BAB40967.1| UDP-D-glucuronate carboxy-lyase [Pis 35.8 0.035 gi|11121508|emb|CAC14890.1| d-TDP-glucose dehydratase [Phragmite 35.8 0.035 gi|15237853|ref|NP_200737.1| UXS3 (UDP-GLUCURONIC ACID DECARB... 35.8 0.035 gi|115452245|ref|NP_001049723.1| Os03g0278000 [Oryza sativa (... 35.8 0.035 gi|54287661|gb|AAV31405.1| putative UDP-glucuronic acid decar... 35.4 0.046 gi|115463437|ref|NP_001055318.1| Os05g0363200 [Oryza sativa (... 35.4 0.046 gi|48093461|gb|AAT40107.1| UDP-glucuronate decarboxylase 1 [Nico 33.5 0.18
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 30 Number of extensions: 0 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 58 Length of database: 101054579 Length adjustment: 0 Effective length of query: 58 Effective length of database: 101054579 Effective search space: 1920037001 Effective search space used: 1920037001 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 60 (27.7 bits)
