RID=1168930299-13592-204615648211.BLASTQ1, Contig136

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168930299-13592-204615648211.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig136
Length=164

Related Structures

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|115465886|ref|NP_001056542.1|  Os06g0103500 [Oryza sativa (...  90.9    1e-18 
gi|18414744|ref|NP_567513.1|  ACX1 (ACYL-COA OXIDASE 1) [Arabidop  90.1    2e-18 
gi|58177066|pdb|1W07|A  Chain A, Arabidopsis Thaliana Acyl-Coa...  90.1    2e-18 
gi|7488059|pir||H71434  probable apetala2 domain TINY - Arabid...  90.1    2e-18
gi|62286589|sp|O65202|ACOX1_ARATH  Acyl-coenzyme A oxidase 1, ...  90.1    2e-18
gi|109157676|pdb|2FON|A  Chain A, X-Ray Crystal Structure Of L...  87.0    2e-17 
gi|58531952|gb|AAW78691.1|  peroxisomal acyl-CoA oxidase 1A [Lyco  87.0    2e-17
gi|58531948|gb|AAW78689.1|  peroxisomal acyl-CoA oxidase 1A [Lyco  87.0    2e-17 
gi|15553478|gb|AAL01887.1|AF404403_1  acyl-CoA oxidase [Glycine m  85.9    4e-17 
gi|58531950|gb|AAW78690.1|  peroxisomal acyl-CoA oxidase 1B [Lyco  85.1    7e-17 
gi|92875906|gb|ABE83706.1|  acyl-CoA oxidase [Medicago truncatula  83.2    3e-16
gi|15227469|ref|NP_181112.1|  ACX5 (ACYL-COA OXIDASE 5); acyl-...  83.2    3e-16 
gi|15553480|gb|AAL01888.1|AF404404_1  acyl-CoA oxidase [Glycine m  79.3    4e-15 
gi|642244|emb|CAA58874.1|  mammalian acyl CoA oxidase homologo...  75.5    5e-14 
gi|71534914|gb|AAZ32861.1|  acyl-CoA oxidase [Medicago sativa]     35.4    0.061
gi|93359566|gb|ABF13309.1|  acyl-CoA oxidase [Phaseolus vulgaris]  32.0    0.67 
gi|2370232|emb|CAA04688.1|  putative acyl-CoA oxidase [Hordeum vu  30.4    2.0   
gi|1006761|emb|CAA57351.1|  Thionin class 1 [Tulipa gesneriana]    30.0    2.6  
gi|33357143|pdb|1JMN|A  Chain A, Solution Structure Of The Viscot  30.0    2.6   
gi|135791|sp|P08943|THNB_VISAL  Viscotoxin-B precursor [Contai...  30.0    2.6  
gi|135795|sp|P01541|THN_DENCL  Denclatoxin-B                       29.3    4.4  
gi|39654089|pdb|1JMP|A  Chain A, Solution Structure Of The Viscot  28.5    7.4   
gi|116000492|emb|CAL50172.1|  Short-chain acyl-CoA dehydrogenase   28.1    9.7  
gi|802164|gb|AAB33005.1|  crambin precursor=thionin variant Th...  28.1    9.7  
gi|44888334|sp|Q9SBK8|THN_BRARP  Thionin precursor [Contains: ...  28.1    9.7

Alignments

 

>gi|115465886|ref|NP_001056542.1|  Os06g0103500 [Oryza sativa (japonica cultivar-group)]
 gi|24413971|dbj|BAC22222.1|  putative acyl-CoA oxidase [Oryza sativa (japonica cultivar-group)]
 gi|113594582|dbj|BAF18456.1|  Os06g0103500 [Oryza sativa (japonica cultivar-group)]
Length=669

 Score = 90.9 bits (224),  Expect = 1e-18
 Identities = 42/54 (77%), Positives = 46/54 (85%), Gaps = 0/54 (0%)
 Frame = +2

Query  2    EGDNIVLLLQVARFLMKTVAQLGSEKKPVGTTAYMGRAEYLMQCHCNVQRAEDW  163
            EGDN+VLLLQVARFLMKTV+QL S K+PVGTTAYMG  +YLMQC C V  AEDW
Sbjct  429  EGDNVVLLLQVARFLMKTVSQLASGKQPVGTTAYMGNIQYLMQCKCGVNTAEDW  482


>gi|18414744|ref|NP_567513.1|  ACX1 (ACYL-COA OXIDASE 1) [Arabidopsis thaliana]
Length=675

 Score = 90.1 bits (222),  Expect = 2e-18
 Identities = 43/54 (79%), Positives = 47/54 (87%), Gaps = 0/54 (0%)
 Frame = +2

Query  2    EGDNIVLLLQVARFLMKTVAQLGSEKKPVGTTAYMGRAEYLMQCHCNVQRAEDW  163
            EGDN+VL LQVARFLMKTVAQLGS K PVGTTAYMGRA +L+QC   VQ+AEDW
Sbjct  424  EGDNVVLQLQVARFLMKTVAQLGSGKVPVGTTAYMGRAAHLLQCRSGVQKAEDW  477


>gi|58177066|pdb|1W07|A  Chain A, Arabidopsis Thaliana Acyl-Coa Oxidase 1
 gi|58177067|pdb|1W07|B  Chain B, Arabidopsis Thaliana Acyl-Coa Oxidase 1
Length=659

 Score = 90.1 bits (222),  Expect = 2e-18
 Identities = 43/54 (79%), Positives = 47/54 (87%), Gaps = 0/54 (0%)
 Frame = +2

Query  2    EGDNIVLLLQVARFLMKTVAQLGSEKKPVGTTAYMGRAEYLMQCHCNVQRAEDW  163
            EGDN+VL LQVARFLMKTVAQLGS K PVGTTAYMGRA +L+QC   VQ+AEDW
Sbjct  424  EGDNVVLQLQVARFLMKTVAQLGSGKVPVGTTAYMGRAAHLLQCRSGVQKAEDW  477


>gi|7488059|pir||H71434  probable apetala2 domain TINY - Arabidopsis thaliana
 gi|2245030|emb|CAB10450.1|  acyl-CoA oxidase like protein [Arabidopsis thaliana]
 gi|7268426|emb|CAB78718.1|  acyl-CoA oxidase like protein [Arabidopsis thaliana]
Length=895

 Score = 90.1 bits (222),  Expect = 2e-18
 Identities = 43/54 (79%), Positives = 47/54 (87%), Gaps = 0/54 (0%)
 Frame = +2

Query  2    EGDNIVLLLQVARFLMKTVAQLGSEKKPVGTTAYMGRAEYLMQCHCNVQRAEDW  163
            EGDN+VL LQVARFLMKTVAQLGS K PVGTTAYMGRA +L+QC   VQ+AEDW
Sbjct  644  EGDNVVLQLQVARFLMKTVAQLGSGKVPVGTTAYMGRAAHLLQCRSGVQKAEDW  697


>gi|62286589|sp|O65202|ACOX1_ARATH  Acyl-coenzyme A oxidase 1, peroxisomal (AOX 1) (Long-chain acyl-CoA 
oxidase) (AtCX1)
 gi|3044214|gb|AAC13498.1|  acyl-CoA oxidase [Arabidopsis thaliana]
 gi|16604462|gb|AAL24237.1|  AT4g16760/dl4405c [Arabidopsis thaliana]
 gi|24111395|gb|AAN46824.1|  At4g16760/dl4405c [Arabidopsis thaliana]
Length=664

 Score = 90.1 bits (222),  Expect = 2e-18
 Identities = 43/54 (79%), Positives = 47/54 (87%), Gaps = 0/54 (0%)
 Frame = +2

Query  2    EGDNIVLLLQVARFLMKTVAQLGSEKKPVGTTAYMGRAEYLMQCHCNVQRAEDW  163
            EGDN+VL LQVARFLMKTVAQLGS K PVGTTAYMGRA +L+QC   VQ+AEDW
Sbjct  424  EGDNVVLQLQVARFLMKTVAQLGSGKVPVGTTAYMGRAAHLLQCRSGVQKAEDW  477


>gi|109157676|pdb|2FON|A  Chain A, X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxidase 
From Lycopersicon Esculentum (Tomato)
 gi|109157677|pdb|2FON|B  Chain B, X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxidase 
From Lycopersicon Esculentum (Tomato)
 gi|109157678|pdb|2FON|C  Chain C, X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxidase 
From Lycopersicon Esculentum (Tomato)
Length=683

 Score = 87.0 bits (214),  Expect = 2e-17
 Identities = 39/54 (72%), Positives = 48/54 (88%), Gaps = 0/54 (0%)
 Frame = +2

Query  2    EGDNIVLLLQVARFLMKTVAQLGSEKKPVGTTAYMGRAEYLMQCHCNVQRAEDW  163
            EGDN+VL LQVARFLMKT++QLG+ KKPVGT +YMGR E+LMQC  +V++AEDW
Sbjct  443  EGDNVVLQLQVARFLMKTISQLGTGKKPVGTVSYMGRIEHLMQCRSDVKQAEDW  496


>gi|58531952|gb|AAW78691.1|  peroxisomal acyl-CoA oxidase 1A [Lycopersicon cheesmaniae]
Length=664

 Score = 87.0 bits (214),  Expect = 2e-17
 Identities = 39/54 (72%), Positives = 48/54 (88%), Gaps = 0/54 (0%)
 Frame = +2

Query  2    EGDNIVLLLQVARFLMKTVAQLGSEKKPVGTTAYMGRAEYLMQCHCNVQRAEDW  163
            EGDN+VL LQVARFLMKT++QLG+ KKPVGT +YMGR E+LMQC  +V++AEDW
Sbjct  424  EGDNVVLQLQVARFLMKTISQLGTGKKPVGTVSYMGRIEHLMQCRSDVKQAEDW  477


>gi|58531948|gb|AAW78689.1|  peroxisomal acyl-CoA oxidase 1A [Lycopersicon esculentum]
Length=664

 Score = 87.0 bits (214),  Expect = 2e-17
 Identities = 39/54 (72%), Positives = 48/54 (88%), Gaps = 0/54 (0%)
 Frame = +2

Query  2    EGDNIVLLLQVARFLMKTVAQLGSEKKPVGTTAYMGRAEYLMQCHCNVQRAEDW  163
            EGDN+VL LQVARFLMKT++QLG+ KKPVGT +YMGR E+LMQC  +V++AEDW
Sbjct  424  EGDNVVLQLQVARFLMKTISQLGTGKKPVGTVSYMGRIEHLMQCRSDVKQAEDW  477


>gi|15553478|gb|AAL01887.1|AF404403_1  acyl-CoA oxidase [Glycine max]
Length=664

 Score = 85.9 bits (211),  Expect = 4e-17
 Identities = 41/54 (75%), Positives = 46/54 (85%), Gaps = 0/54 (0%)
 Frame = +2

Query  2    EGDNIVLLLQVARFLMKTVAQLGSEKKPVGTTAYMGRAEYLMQCHCNVQRAEDW  163
            EGDN+VLLLQVAR LMKTV+QLGS  KPVGTTAYM R E LMQ H +V++AEDW
Sbjct  424  EGDNVVLLLQVARHLMKTVSQLGSGNKPVGTTAYMARVEQLMQYHSDVEKAEDW  477


>gi|58531950|gb|AAW78690.1|  peroxisomal acyl-CoA oxidase 1B [Lycopersicon esculentum]
Length=649

 Score = 85.1 bits (209),  Expect = 7e-17
 Identities = 38/54 (70%), Positives = 47/54 (87%), Gaps = 0/54 (0%)
 Frame = +2

Query  2    EGDNIVLLLQVARFLMKTVAQLGSEKKPVGTTAYMGRAEYLMQCHCNVQRAEDW  163
            EGDN+VLLLQVARFL+KT++QL S KKP GT AYMG+ E LMQCH +V++A+DW
Sbjct  424  EGDNVVLLLQVARFLLKTLSQLSSGKKPTGTIAYMGKIEQLMQCHSDVEQAKDW  477


>gi|92875906|gb|ABE83706.1|  acyl-CoA oxidase [Medicago truncatula]
Length=664

 Score = 83.2 bits (204),  Expect = 3e-16
 Identities = 39/54 (72%), Positives = 46/54 (85%), Gaps = 0/54 (0%)
 Frame = +2

Query  2    EGDNIVLLLQVARFLMKTVAQLGSEKKPVGTTAYMGRAEYLMQCHCNVQRAEDW  163
            EGDNIVLLLQVAR LMK +++LGS KKPVGTTAYMGR E L++   +VQ+AEDW
Sbjct  424  EGDNIVLLLQVARHLMKVISRLGSGKKPVGTTAYMGRVEQLLEARSDVQKAEDW  477


>gi|15227469|ref|NP_181112.1|  ACX5 (ACYL-COA OXIDASE 5); acyl-CoA oxidase/ oxidoreductase [Arabidopsis 
thaliana]
 gi|62286640|sp|Q9ZQP2|ACO12_ARATH  Putative acyl-coenzyme A oxidase 1.2, peroxisomal
 gi|4263786|gb|AAD15446.1|  putative acyl-CoA oxidase [Arabidopsis thaliana]
 gi|18377807|gb|AAL67053.1|  putative acyl-CoA oxidase [Arabidopsis thaliana]
 gi|20465713|gb|AAM20325.1|  putative acyl-CoA oxidase [Arabidopsis thaliana]
Length=664

 Score = 83.2 bits (204),  Expect = 3e-16
 Identities = 39/54 (72%), Positives = 45/54 (83%), Gaps = 0/54 (0%)
 Frame = +2

Query  2    EGDNIVLLLQVARFLMKTVAQLGSEKKPVGTTAYMGRAEYLMQCHCNVQRAEDW  163
            EGDN+VL LQVARFLMKTV+QLGS K P GTTAYMGRA++L+QC   V+ A DW
Sbjct  424  EGDNVVLQLQVARFLMKTVSQLGSGKAPSGTTAYMGRAKHLLQCSSGVRNARDW  477


>gi|15553480|gb|AAL01888.1|AF404404_1  acyl-CoA oxidase [Glycine max]
Length=665

 Score = 79.3 bits (194),  Expect = 4e-15
 Identities = 37/54 (68%), Positives = 44/54 (81%), Gaps = 0/54 (0%)
 Frame = +2

Query  2    EGDNIVLLLQVARFLMKTVAQLGSEKKPVGTTAYMGRAEYLMQCHCNVQRAEDW  163
            EGDN VLLLQVAR L+KT++QLGS  KPVGTT+Y+GR E LMQ   +VQ+ EDW
Sbjct  425  EGDNTVLLLQVARHLIKTISQLGSRNKPVGTTSYIGRVEQLMQYRSDVQKVEDW  478


>gi|642244|emb|CAA58874.1|  mammalian acyl CoA oxidase homologous [Hordeum vulgare subsp. 
vulgare]
Length=275

 Score = 75.5 bits (184),  Expect = 5e-14
 Identities = 34/54 (62%), Positives = 41/54 (75%), Gaps = 0/54 (0%)
 Frame = +2

Query  2    EGDNIVLLLQVARFLMKTVAQLGSEKKPVGTTAYMGRAEYLMQCHCNVQRAEDW  163
            EGDN+VL+L VARFLMKTV+Q+ +  +PVGT AYMG   +LMQC   V  AEDW
Sbjct  60   EGDNVVLMLHVARFLMKTVSQVATRNQPVGTVAYMGNIHHLMQCKSAVNTAEDW  113


>gi|71534914|gb|AAZ32861.1|  acyl-CoA oxidase [Medicago sativa]
Length=189

 Score = 35.4 bits (80),  Expect = 0.061
 Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 0/24 (0%)
 Frame = +2

Query  92   TTAYMGRAEYLMQCHCNVQRAEDW  163
            TTAY+ R E LMQ   +V+RAEDW
Sbjct  1    TTAYLARVEQLMQYQSDVKRAEDW  24


>gi|93359566|gb|ABF13309.1|  acyl-CoA oxidase [Phaseolus vulgaris]
Length=172

 Score = 32.0 bits (71),  Expect = 0.67
 Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 0/24 (0%)
 Frame = +2

Query  92   TTAYMGRAEYLMQCHCNVQRAEDW  163
            TT+Y+GR E LM    +VQ+ EDW
Sbjct  1    TTSYIGRVEQLMLYRSDVQKEEDW  24


>gi|2370232|emb|CAA04688.1|  putative acyl-CoA oxidase [Hordeum vulgare subsp. vulgare]
Length=643

 Score = 30.4 bits (67),  Expect = 2.0
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 0/41 (0%)
 Frame = +1

Query  22   AFTGCKVFNEDRCPAGF*KEACWNYSLYGTSRIPHAMPL*C  144
            A  GCKVF+EDR   G  +  C + S +G      AM   C
Sbjct  410  AVAGCKVFDEDRLSGGHWEPTCRHRSSHGQHTALDAMQKRC  450


>gi|1006761|emb|CAA57351.1|  Thionin class 1 [Tulipa gesneriana]
Length=114

 Score = 30.0 bits (66),  Expect = 2.6
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 0/27 (0%)
 Frame = +1

Query  7   RQYCAAFTGCKVFNEDRCPAGF*KEAC  87
           R  CAA   CK+ +  +CP G+ K  C
Sbjct  41  RPVCAATCDCKIISSGKCPPGYEKLGC  67


>gi|33357143|pdb|1JMN|A  Chain A, Solution Structure Of The Viscotoxin A2
Length=46

 Score = 30.0 bits (66),  Expect = 2.6
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 0/24 (0%)
 Frame = +1

Query  7   RQYCAAFTGCKVFNEDRCPAGF*K  78
           RQ CA+ +GCK+ +   CP+ + K
Sbjct  23  RQVCASLSGCKIISASTCPSDYPK  46


>gi|135791|sp|P08943|THNB_VISAL  Viscotoxin-B precursor [Contains: Viscotoxin-B (Viscotoxin-B2); 
Acidic protein]
Length=103

 Score = 30.0 bits (66),  Expect = 2.6
 Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 0/27 (0%)
 Frame = +1

Query  7   RQYCAAFTGCKVFNEDRCPAGF*KEAC  87
           R+ CA+ +GCK+ +   CP+ + K  C
Sbjct  29  RERCASLSGCKIISASTCPSDYPKFYC  55


>gi|135795|sp|P01541|THN_DENCL  Denclatoxin-B
Length=46

 Score = 29.3 bits (64),  Expect = 4.4
 Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 0/22 (0%)
 Frame = +1

Query  7   RQYCAAFTGCKVFNEDRCPAGF  72
           R  CAA +GCK+ +   CP G+
Sbjct  23  RPVCAALSGCKIISGTGCPPGY  44


>gi|39654089|pdb|1JMP|A  Chain A, Solution Structure Of The Viscotoxin B
Length=46

 Score = 28.5 bits (62),  Expect = 7.4
 Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 0/24 (0%)
 Frame = +1

Query  7   RQYCAAFTGCKVFNEDRCPAGF*K  78
           R+ CA+ +GCK+ +   CP+ + K
Sbjct  23  RERCASLSGCKIISASTCPSDYPK  46


>gi|116000492|emb|CAL50172.1|  Short-chain acyl-CoA dehydrogenase (ISS) [Ostreococcus tauri]
Length=688

 Score = 28.1 bits (61),  Expect = 9.7
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 0/35 (0%)
 Frame = +2

Query  2    EGDNIVLLLQVARFLMKTVAQLGSEKKPVGTTAYM  106
            EGDN VL LQ AR+L+K        + P     Y+
Sbjct  451  EGDNNVLCLQTARYLLKMYRNTIKGETPPDVIGYL  485


>gi|802164|gb|AAB33005.1|  crambin precursor=thionin variant Thi2Ca3 [Crambe abyssinica, 
seeds, Peptide Partial, 133 aa]
Length=133

 Score = 28.1 bits (61),  Expect = 9.7
 Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 0/22 (0%)
 Frame = +1

Query  7   RQYCAAFTGCKVFNEDRCPAGF  72
           R  CAA +GCK+ +  +CP  +
Sbjct  47  RPVCAALSGCKILDVTKCPPDY  68


>gi|44888334|sp|Q9SBK8|THN_BRARP  Thionin precursor [Contains: Thionin; Acidic protein]
 gi|6650328|gb|AAF21800.1|  thionin [Brassica rapa subsp. pekinensis]
Length=133

 Score = 28.1 bits (61),  Expect = 9.7
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 0/27 (0%)
 Frame = +1

Query  16  CAAFTGCKVFNEDRCPAGF*KEACWNY  96
           CA  +GCK+ +   CP G+  +   NY
Sbjct  50  CANLSGCKIVSGTTCPPGYTHDILQNY  76

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 111
Number of extensions: 0
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 164
Length of database: 101054579
Length adjustment: 27
Effective length of query: 137
Effective length of database: 93404156
Effective search space: 2521912212
Effective search space used: 2521912212
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)

Distribution of 25 Blast Hits on the Query Sequence