Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168930352-24878-7015125356.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig138 Length=268
Score E Sequences producing significant alignments: (Bits) Value gi|21554118|gb|AAM63198.1| unknown [Arabidopsis thaliana] 84.7 9e-17 gi|18401689|ref|NP_566593.1| unknown protein [Arabidopsis tha... 84.7 9e-17 gi|9294497|dbj|BAB02716.1| unnamed protein product [Arabidopsis 84.7 9e-17 gi|115440557|ref|NP_001044558.1| Os01g0805200 [Oryza sativa (... 79.7 3e-15 gi|116061118|emb|CAL56506.1| unnamed protein product [Ostreococc 43.5 2e-04 gi|115470593|ref|NP_001058895.1| Os07g0148900 [Oryza sativa (... 29.6 3.3 gi|77548429|gb|ABA91226.1| hypothetical protein LOC_Os11g0291... 29.3 4.4 gi|15222643|ref|NP_176603.1| ATP binding / kinase/ protein se... 29.3 4.4 gi|548605|sp|P36886|PSAK_HORVU Photosystem I reaction center ... 29.3 4.4 gi|15235186|ref|NP_195123.1| protein binding [Arabidopsis tha... 28.9 5.7 gi|18377977|gb|AAL67131.1| putative beta-glucosidase [Arabidopsi 28.9 5.7 gi|2746341|gb|AAC39504.1| ATA27 [Arabidopsis thaliana] 28.9 5.7 gi|8778810|gb|AAF26759.2|AC007396_8 T4O12.15 [Arabidopsis thalia 28.9 5.7 gi|115486205|ref|NP_001068246.1| Os11g0606000 [Oryza sativa (... 28.9 5.7 gi|15222905|ref|NP_177722.1| ATA27; hydrolase, hydrolyzing O-... 28.9 5.7 gi|116061005|emb|CAL56393.1| Phosphatidylinositol-4-phosphate... 28.5 7.5 gi|168457|gb|AAA33456.1| cell wall protein (put.); putative 28.5 7.5 gi|22092|emb|CAA45514.1| hydroxyproline-rich glycoprotein [Zea d 28.5 7.5 gi|22333|emb|CAA44844.1| hydroxyproline-rich glycoprotein [Ze... 28.5 7.5 gi|257041|gb|AAB23539.1| hydroxyproline-rich glycoprotein; HR... 28.5 7.5 gi|228937|prf||1814452B Hyp-rich glycoprotein 28.5 7.5 gi|119712|sp|P14918|EXTN_MAIZE Extensin precursor (Proline-ri... 28.5 7.5 gi|227614|prf||1707318A Thr rich extensin 28.5 7.5 gi|100864|pir||S08315 cell wall protein - maize (fragment) >g... 28.5 7.5 gi|228938|prf||1814452C Hyp-rich glycoprotein 28.5 7.5 gi|115458346|ref|NP_001052773.1| Os04g0418800 [Oryza sativa (... 28.1 9.7 gi|62421765|gb|AAX82548.1| 120 kDa pistil extensin-like protein 28.1 9.7 gi|38605837|emb|CAE02917.3| OSJNBb0108J11.9 [Oryza sativa (japon 28.1 9.7 gi|1431629|emb|CAA67728.1| pectinacetylesterase precursor [Vigna 28.1 9.7
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 153 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 268 Length of database: 101054579 Length adjustment: 59 Effective length of query: 209 Effective length of database: 84336988 Effective search space: 2530109640 Effective search space used: 2530109640 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)