RID=1168930391-18537-13111321059.BLASTQ1, Contig140

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168930391-18537-13111321059.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig140
Length=273

Distribution of 21 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|417544|sp|P32869|PSAD_CUCSA  Photosystem I reaction center ...   130    1e-30
gi|407769|dbj|BAA02871.1|  PSI-D1 precursor [Nicotiana sylvestris   129    3e-30
gi|110681492|emb|CAL25356.1|  photosystem I reaction center su...   129    4e-30
gi|131167|sp|P29302|PSAD_NICSY  Photosystem I reaction center ...   127    2e-29
gi|92893306|gb|ABE91713.1|  Photosystem I protein PsaD [Medicago    126    2e-29
gi|34787117|emb|CAD89270.1|  putative photosystem I reaction c...   126    2e-29 
gi|131166|sp|P12372|PSAD_LYCES  Photosystem I reaction center ...   126    2e-29 
gi|115477831|ref|NP_001062511.1|  Os08g0560900 [Oryza sativa (...   126    2e-29 
gi|21293|emb|CAA68728.1|  unnamed protein product [Spinacia olera   122    4e-28
gi|21289|emb|CAA32182.1|  unnamed protein product [Spinacia olera   122    4e-28
gi|19855891|sp|P12353|PSAD_SPIOL  Photosystem I reaction cente...   122    4e-28
gi|1488649|emb|CAA54744.1|  psaD [Spinacia oleracea]                122    4e-28
gi|7677044|gb|AAF67002.1|AF147726_1  ferredoxin-binding subunit [   121    6e-28 
gi|21595031|gb|AAM66066.1|  putative photosystem I reaction ce...   121    6e-28 
gi|15218708|ref|NP_171812.1|  unknown protein [Arabidopsis tha...   121    6e-28 
gi|15235503|ref|NP_192186.1|  unknown protein [Arabidopsis tha...   121    6e-28 
gi|548603|sp|P36213|PSAD_HORVU  Photosystem I reaction center ...   121    8e-28
gi|5732201|emb|CAB52677.1|  photosystem I subunit II precursor [A   117    2e-26 
gi|1916314|gb|AAB51150.1|  subunit II of photosystem I [Picea abi   106    3e-23
gi|2499965|sp|Q39615|PSAD_CHLRE  Photosystem I reaction center...  87.8    1e-17
gi|79531455|ref|NP_199580.2|  unknown protein [Arabidopsis thalia  28.9    5.7

Alignments

 

>gi|417544|sp|P32869|PSAD_CUCSA  Photosystem I reaction center subunit II, chloroplast precursor 
(Photosystem I 20 kDa subunit) (PSI-D) (PS I subunit 5)
 gi|227772|prf||1710320A  photosystem I 20kD protein
Length=207

 Score =  130 bits (327),  Expect = 1e-30
 Identities = 60/62 (96%), Positives = 61/62 (98%), Gaps = 0/62 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVY  182
            KI YQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQNFRSIGKNVSPIEVKFTGKQVY
Sbjct  146  KIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEVKFTGKQVY  205

Query  183  DL  188
            DL
Sbjct  206  DL  207


>gi|407769|dbj|BAA02871.1|  PSI-D1 precursor [Nicotiana sylvestris]
Length=214

 Score =  129 bits (324),  Expect = 3e-30
 Identities = 59/62 (95%), Positives = 61/62 (98%), Gaps = 0/62 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVY  182
            KINY+FYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKN SPIEVKFTGKQVY
Sbjct  153  KINYRFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNKSPIEVKFTGKQVY  212

Query  183  DL  188
            D+
Sbjct  213  DI  214


>gi|110681492|emb|CAL25356.1|  photosystem I reaction center subunit II [Platanus x acerifolia]
Length=122

 Score =  129 bits (323),  Expect = 4e-30
 Identities = 59/62 (95%), Positives = 60/62 (96%), Gaps = 0/62 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVY  182
            KI YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKN +PIEVKFTGKQVY
Sbjct  61   KIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNANPIEVKFTGKQVY  120

Query  183  DL  188
            DL
Sbjct  121  DL  122


>gi|131167|sp|P29302|PSAD_NICSY  Photosystem I reaction center subunit II, chloroplast precursor 
(Photosystem I 20 kDa subunit) (PSI-D)
 gi|19748|emb|CAA42623.1|  PSI-D2 [Nicotiana sylvestris]
Length=204

 Score =  127 bits (318),  Expect = 2e-29
 Identities = 59/62 (95%), Positives = 60/62 (96%), Gaps = 0/62 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVY  182
            KINY+FYRVFPNGEVQYLHPKDGVYPEKVN GRQGVGQNFRSIGKN SPIEVKFTGKQVY
Sbjct  143  KINYRFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSIGKNKSPIEVKFTGKQVY  202

Query  183  DL  188
            DL
Sbjct  203  DL  204


>gi|92893306|gb|ABE91713.1|  Photosystem I protein PsaD [Medicago truncatula]
Length=209

 Score =  126 bits (317),  Expect = 2e-29
 Identities = 58/62 (93%), Positives = 60/62 (96%), Gaps = 0/62 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVY  182
            KI YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQ +
Sbjct  148  KIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQPF  207

Query  183  DL  188
            D+
Sbjct  208  DV  209


>gi|34787117|emb|CAD89270.1|  putative photosystem I reaction centre PSI-D subunit precursor 
[Solanum tuberosum]
Length=207

 Score =  126 bits (317),  Expect = 2e-29
 Identities = 58/62 (93%), Positives = 60/62 (96%), Gaps = 0/62 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVY  182
            KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQNFRSIGKN S IEVKFTGKQVY
Sbjct  146  KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNKSAIEVKFTGKQVY  205

Query  183  DL  188
            D+
Sbjct  206  DI  207


>gi|131166|sp|P12372|PSAD_LYCES  Photosystem I reaction center subunit II, chloroplast precursor 
(Photosystem I 20 kDa subunit) (PSI-D)
 gi|170492|gb|AAA34185.1|  photosystem I subunit II protein precursor
 gi|226544|prf||1601516A  photosystem I reaction center II
Length=208

 Score =  126 bits (317),  Expect = 2e-29
 Identities = 58/62 (93%), Positives = 60/62 (96%), Gaps = 0/62 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVY  182
            KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQNFRSIGKN S IEVKFTGKQVY
Sbjct  147  KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNKSAIEVKFTGKQVY  206

Query  183  DL  188
            D+
Sbjct  207  DI  208


>gi|115477831|ref|NP_001062511.1|  Os08g0560900 [Oryza sativa (japonica cultivar-group)]
 gi|29367391|gb|AAO72568.1|  chloroplast photosystem I reaction center subunit II precursor-like 
protein [Oryza sativa (japonica cultivar-group)]
 gi|45736168|dbj|BAD13214.1|  putative photosystem I reaction center subunit II, chloroplast 
precursor (Photosystem I 20 kDa subunit) (PSI-D) [Oryza sativa 
(japonica cultivar-group)]
 gi|113624480|dbj|BAF24425.1|  Os08g0560900 [Oryza sativa (japonica cultivar-group)]
Length=203

 Score =  126 bits (317),  Expect = 2e-29
 Identities = 58/62 (93%), Positives = 60/62 (96%), Gaps = 0/62 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVY  182
            KINYQFYRVFPNGEVQYLHPKDGVYPEKVN GRQGVGQNFRSIGKNVSPIEVKFTGK V+
Sbjct  142  KINYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSIGKNVSPIEVKFTGKNVF  201

Query  183  DL  188
            D+
Sbjct  202  DI  203


>gi|21293|emb|CAA68728.1|  unnamed protein product [Spinacia oleracea]
Length=212

 Score =  122 bits (306),  Expect = 4e-28
 Identities = 57/62 (91%), Positives = 58/62 (93%), Gaps = 0/62 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVY  182
            KI YQFYRVFP+GEVQYLHPKDGVYPEKVNPGRQGVG N RSIGKNVSPIEVKFTGKQ Y
Sbjct  151  KIKYQFYRVFPSGEVQYLHPKDGVYPEKVNPGRQGVGLNMRSIGKNVSPIEVKFTGKQPY  210

Query  183  DL  188
            DL
Sbjct  211  DL  212


>gi|21289|emb|CAA32182.1|  unnamed protein product [Spinacia oleracea]
Length=212

 Score =  122 bits (306),  Expect = 4e-28
 Identities = 57/62 (91%), Positives = 58/62 (93%), Gaps = 0/62 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVY  182
            KI YQFYRVFP+GEVQYLHPKDGVYPEKVNPGRQGVG N RSIGKNVSPIEVKFTGKQ Y
Sbjct  151  KIKYQFYRVFPSGEVQYLHPKDGVYPEKVNPGRQGVGLNMRSIGKNVSPIEVKFTGKQPY  210

Query  183  DL  188
            DL
Sbjct  211  DL  212


>gi|19855891|sp|P12353|PSAD_SPIOL  Photosystem I reaction center subunit II, chloroplast precursor 
(Photosystem I 20 kDa subunit) (PSI-D)
Length=212

 Score =  122 bits (306),  Expect = 4e-28
 Identities = 57/62 (91%), Positives = 58/62 (93%), Gaps = 0/62 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVY  182
            KI YQFYRVFP+GEVQYLHPKDGVYPEKVNPGRQGVG N RSIGKNVSPIEVKFTGKQ Y
Sbjct  151  KIKYQFYRVFPSGEVQYLHPKDGVYPEKVNPGRQGVGLNMRSIGKNVSPIEVKFTGKQPY  210

Query  183  DL  188
            DL
Sbjct  211  DL  212


>gi|1488649|emb|CAA54744.1|  psaD [Spinacia oleracea]
Length=211

 Score =  122 bits (306),  Expect = 4e-28
 Identities = 57/62 (91%), Positives = 58/62 (93%), Gaps = 0/62 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVY  182
            KI YQFYRVFP+GEVQYLHPKDGVYPEKVNPGRQGVG N RSIGKNVSPIEVKFTGKQ Y
Sbjct  150  KIKYQFYRVFPSGEVQYLHPKDGVYPEKVNPGRQGVGLNMRSIGKNVSPIEVKFTGKQPY  209

Query  183  DL  188
            DL
Sbjct  210  DL  211


>gi|7677044|gb|AAF67002.1|AF147726_1  ferredoxin-binding subunit [Zea mays]
Length=108

 Score =  121 bits (304),  Expect = 6e-28
 Identities = 54/61 (88%), Positives = 58/61 (95%), Gaps = 0/61 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVY  182
            KI YQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQNFRSIGKNV+PI+VKFTGK  +
Sbjct  48   KITYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVNPIDVKFTGKSTF  107

Query  183  D  185
            D
Sbjct  108  D  108


>gi|21595031|gb|AAM66066.1|  putative photosystem I reaction center subunit II precursor [Arabidopsis 
thaliana]
Length=208

 Score =  121 bits (304),  Expect = 6e-28
 Identities = 56/62 (90%), Positives = 57/62 (91%), Gaps = 0/62 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVY  182
            KI YQFYRVFPNGEVQYLHPKDGVYPEK NPGR+GVG N RSIGKNVSPIEVKFTGKQ Y
Sbjct  147  KITYQFYRVFPNGEVQYLHPKDGVYPEKANPGREGVGLNMRSIGKNVSPIEVKFTGKQSY  206

Query  183  DL  188
            DL
Sbjct  207  DL  208


>gi|15218708|ref|NP_171812.1|  unknown protein [Arabidopsis thaliana]
 gi|38503234|sp|Q9SA56|PSAD2_ARATH  Photosystem I reaction center subunit II-2, chloroplast precursor 
(Photosystem I 20 kDa subunit 2) (PSI-D2)
 gi|4587564|gb|AAD25795.1|AC006550_3  Strong similarity to gb|X14017 photosystem I reaction centre 
subunit II precursor (psaD) from Spinacia oleracea.  ESTs gb|R30423, 
gb|T42998, gb|Z18178, gb|T14133, gb|N65521, gb|T42498, 
gb|T41918, gb|N38024, gb|R65109, gb|T43849, gb|AA394388, 
gb|T20925 and gb|N65696 come from this gene. [Arabidopsis thaliana]
 gi|11692912|gb|AAG40059.1|AF324708_1  At1g03130 [Arabidopsis thaliana]
 gi|12083234|gb|AAG48776.1|AF332413_1  putative photosystem I reaction center subunit II precursor [Arabidopsis 
thaliana]
 gi|14517460|gb|AAK62620.1|  At1g03130/F10O3_4 [Arabidopsis thaliana]
 gi|21555282|gb|AAM63823.1|  putative photosystem I reaction center subunit II precursor [Arabidopsis 
thaliana]
 gi|23507779|gb|AAN38693.1|  At1g03130/F10O3_4 [Arabidopsis thaliana]
Length=204

 Score =  121 bits (304),  Expect = 6e-28
 Identities = 56/62 (90%), Positives = 57/62 (91%), Gaps = 0/62 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVY  182
            KI YQFYRVFPNGEVQYLHPKDGVYPEK NPGR+GVG N RSIGKNVSPIEVKFTGKQ Y
Sbjct  143  KITYQFYRVFPNGEVQYLHPKDGVYPEKANPGREGVGLNMRSIGKNVSPIEVKFTGKQSY  202

Query  183  DL  188
            DL
Sbjct  203  DL  204


>gi|15235503|ref|NP_192186.1|  unknown protein [Arabidopsis thaliana]
 gi|38503230|sp|Q9S7H1|PSAD1_ARATH  Photosystem I reaction center subunit II-1, chloroplast precursor 
(Photosystem I 20 kDa subunit 1) (PSI-D1)
 gi|11692846|gb|AAG40026.1|AF324675_1  AT4g02770 [Arabidopsis thaliana]
 gi|11908080|gb|AAG41469.1|AF326887_1  putative photosystem I reaction center subunit II precursor [Arabidopsis 
thaliana]
 gi|14488084|gb|AAK63862.1|AF389290_1  AT4g02770/T5J8_7 [Arabidopsis thaliana]
 gi|4263525|gb|AAD15351.1|  putative photosystem I reaction center subunit II precursor [Arabidopsis 
thaliana]
 gi|5732199|emb|CAB52676.1|  photosystem I subunit II precursor [Arabidopsis thaliana]
 gi|7269762|emb|CAB77762.1|  putative photosystem I reaction center subunit II precursor [Arabidopsis 
thaliana]
 gi|17064872|gb|AAL32590.1|  Unknown protein [Arabidopsis thaliana]
 gi|20148685|gb|AAM10233.1|  unknown protein [Arabidopsis thaliana]
 gi|20908086|gb|AAM26726.1|  AT4g02770/T5J8_7 [Arabidopsis thaliana]
 gi|21281091|gb|AAM44987.1|  putative photosystem I reaction center subunit II precursor [Arabidopsis 
thaliana]
Length=208

 Score =  121 bits (304),  Expect = 6e-28
 Identities = 56/62 (90%), Positives = 57/62 (91%), Gaps = 0/62 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVY  182
            KI YQFYRVFPNGEVQYLHPKDGVYPEK NPGR+GVG N RSIGKNVSPIEVKFTGKQ Y
Sbjct  147  KITYQFYRVFPNGEVQYLHPKDGVYPEKANPGREGVGLNMRSIGKNVSPIEVKFTGKQSY  206

Query  183  DL  188
            DL
Sbjct  207  DL  208


>gi|548603|sp|P36213|PSAD_HORVU  Photosystem I reaction center subunit II, chloroplast precursor 
(Photosystem I 20 kDa subunit) (PSI-D)
 gi|167085|gb|AAA18567.1|  PSI-D subunit
Length=205

 Score =  121 bits (303),  Expect = 8e-28
 Identities = 56/62 (90%), Positives = 58/62 (93%), Gaps = 0/62 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVY  182
            KI YQFYRVFPNGEVQYLHPKDGVYPEKVN GRQGVGQNFRSIGKNVSPIEVKFTGK  +
Sbjct  144  KIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSIGKNVSPIEVKFTGKNSF  203

Query  183  DL  188
            D+
Sbjct  204  DI  205


>gi|5732201|emb|CAB52677.1|  photosystem I subunit II precursor [Arabidopsis thaliana]
Length=204

 Score =  117 bits (292),  Expect = 2e-26
 Identities = 53/62 (85%), Positives = 55/62 (88%), Gaps = 0/62 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVY  182
            KI YQFYRVFPNGEVQYLHPKDG+YPEK NPGR+G G N RSIGKNVSPIEVKF GKQ Y
Sbjct  143  KITYQFYRVFPNGEVQYLHPKDGIYPEKANPGREGFGLNMRSIGKNVSPIEVKFPGKQSY  202

Query  183  DL  188
            DL
Sbjct  203  DL  204


>gi|1916314|gb|AAB51150.1|  subunit II of photosystem I [Picea abies]
Length=102

 Score =  106 bits (264),  Expect = 3e-23
 Identities = 48/54 (88%), Positives = 50/54 (92%), Gaps = 0/54 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKF  164
            KI YQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVG N RSIGKNV PI+VKF
Sbjct  30   KIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGKNVDPIQVKF  83


>gi|2499965|sp|Q39615|PSAD_CHLRE  Photosystem I reaction center subunit II, chloroplast precursor 
(Photosystem I 20 kDa subunit) (PSI-D)
 gi|18478582|gb|AAL73208.1|AF335592_1  photosystem I subunit [Chlamydomonas reinhardtii]
 gi|498824|emb|CAA56122.1|  psaD [Chlamydomonas reinhardtii]
 gi|1644293|emb|CAA52440.1|  PSI reaction center, subunit II [Chlamydomonas reinhardtii]
Length=196

 Score = 87.8 bits (216),  Expect = 1e-17
 Identities = 39/59 (66%), Positives = 48/59 (81%), Gaps = 0/59 (0%)
 Frame = +3

Query  3    KINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQV  179
            K+   FYRVFP+G+VQYLHP DGVYPEKVN GR G  QN R IG+NV+PI+VKF+G+ +
Sbjct  133  KLTPCFYRVFPDGKVQYLHPADGVYPEKVNAGRVGANQNMRRIGQNVNPIKVKFSGRMM  191


>gi|79531455|ref|NP_199580.2|  unknown protein [Arabidopsis thaliana]
Length=1653

 Score = 28.9 bits (63),  Expect = 5.7
 Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
 Frame = +3

Query  33    PNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVYDL*ETLGRVL  212
             P   ++ LHPKD   P+ ++   + V    +    +  PIE +++G+   +  E+ G+ L
Sbjct  1516  PKKNLKQLHPKDT--PKSLSLEHEKVESRNKKRRSSALPIETEYSGEAGEEKSESEGKSL  1573

Query  213   SGRDDDVTMI  242
                +DD  ++
Sbjct  1574  KEGEDDEEVV  1583

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 199
Number of extensions: 3
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 273
Length of database: 101054579
Length adjustment: 61
Effective length of query: 212
Effective length of database: 83770290
Effective search space: 2513108700
Effective search space used: 2513108700
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)