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BLASTX 2.2.15 [Oct-15-2006] 
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168930451-22543-214151090742.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs
Taxonomy reports

Query=  Contig142
Length=647

Distribution of 41 Blast Hits on the Query Sequence


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|18402389|ref|NP_564534.1|  EMB1144; chorismate synthase [Ar...   255    8e-75 UniGene infoGene info
gi|79319526|ref|NP_001031157.1|  EMB1144; chorismate synthase [Ar   255    8e-75 UniGene infoGene info
gi|79319550|ref|NP_001031158.1|  EMB1144; chorismate synthase [Ar   255    8e-75 UniGene infoGene info
gi|76782200|gb|ABA54870.1|  putative chorismate synthase [Fagus s   253    2e-73
gi|12321114|gb|AAG50662.1|AC084242_6  chorismate synthase, putati   249    8e-73
gi|11094811|gb|AAG29740.1|AC084414_8  chorismate synthase prec...   249    8e-73
gi|2492952|sp|Q42884|AROC1_LYCES  Chorismate synthase 1, chlor...   234    2e-68 Gene info
gi|2492953|sp|Q42885|AROC2_LYCES  Chorismate synthase 2, chlor...   227    5e-66 Gene info
gi|115451975|ref|NP_001049588.1|  Os03g0254800 [Oryza sativa (...   223    2e-63 Gene info
gi|77547031|gb|ABA90483.1|  chorismate synthase [Glycine max]       238    1e-62 UniGene infoGene info
gi|114182|sp|P27793|AROC_CORSE  Chorismate synthase, chloropla...   237    3e-62
gi|46093430|dbj|BAD14928.1|  chorismate synthase [Oryza sativa (j   207    2e-53 UniGene info
gi|116061759|emb|CAL52477.1|  S40409 chorismate synthase (ISS) [O   184    3e-46
gi|30693071|ref|NP_851101.1|  binding [Arabidopsis thaliana] >...  34.3    0.40  UniGene infoGene info
gi|13924509|gb|AAK49035.1|AF249733_1  putative SR-like splicing f  34.3    0.40  UniGene info
gi|30693073|ref|NP_198553.2|  binding [Arabidopsis thaliana] >...  34.3    0.40  UniGene infoGene info
gi|119638458|gb|ABL85049.1|  hypothetical protein 57h21.24 [Brach  32.7    1.2  
gi|115462403|ref|NP_001054801.1|  Os05g0178900 [Oryza sativa (...  32.3    1.5   Gene info
gi|42566389|ref|NP_192760.2|  unknown protein [Arabidopsis thalia  31.6    2.6   UniGene infoGene info
gi|115442331|ref|NP_001045445.1|  Os01g0957100 [Oryza sativa (...  31.2    3.4   Gene info
gi|20805201|dbj|BAB92869.1|  putative receptor-like protein ki...  31.2    3.4   Gene info
gi|47497408|dbj|BAD19445.1|  MADS box interactor-like [Oryza s...  31.2    3.4   Gene info
gi|37921345|gb|AAP55675.1|  geranylgeranyl reductase [Prunus pers  30.4    5.8  
gi|115484773|ref|NP_001067530.1|  Os11g0223400 [Oryza sativa (...  29.6    9.8   Gene info
gi|115449065|ref|NP_001048312.1|  Os02g0781700 [Oryza sativa (...  29.6    9.8   Gene info
gi|29367481|gb|AAO72596.1|  unknown [Oryza sativa (japonica culti  29.6    9.8   UniGene info
gi|7770339|gb|AAF69709.1|AC016041_14  F27J15.26 [Arabidopsis t...  29.6    9.8  
gi|79361705|ref|NP_175325.2|  unknown protein [Arabidopsis thalia  29.6    9.8   UniGene infoGene info
gi|62733742|gb|AAX95851.1|  NB-ARC domain, putative [Oryza sat...  29.6    9.8  
gi|115482784|ref|NP_001064985.1|  Os10g0501300 [Oryza sativa (...  29.6    9.8   Gene info
gi|47497407|dbj|BAD19444.1|  MADS box interactor-like [Oryza s...  29.6    9.8   Gene info
Alignments

>gi|18402389|ref|NP_564534.1| UniGene infoGene info EMB1144; chorismate synthase [Arabidopsis thaliana]
 gi|83300489|sp|P57720|AROC_ARATH Gene info Chorismate synthase, chloroplast precursor (5-enolpyruvylshikimate-3-phosphate 
phospholyase)
 gi|15982824|gb|AAL09759.1| UniGene infoGene info At1g48850/T24P22_3 [Arabidopsis thaliana]
 gi|53749180|gb|AAU90075.1| UniGene infoGene info At1g48850 [Arabidopsis thaliana]
 gi|110742465|dbj|BAE99151.1| Gene info hypothetical protein [Arabidopsis thaliana]
Length=436

 Score =  255 bits (652),  Expect(2) = 8e-75
 Identities = 132/168 (78%), Positives = 153/168 (91%), Gaps = 0/168 (0%)
 Frame = +3

Query  12   SLSSDLQRLSFSSLHISVKPRTHKKLQIQAAGSTFGNYFRVTTFGESHGGGVGCIVDGCP  191
            SL S+L+RLS  ++ IS++ +T K  QIQA GS++G +FRV+TFGESHGGGVGCI+DGCP
Sbjct  21   SLPSELRRLSSPAVQISLRTQTRKNFQIQATGSSYGTHFRVSTFGESHGGGVGCIIDGCP  80

Query  192  PRIPLSEADLQFDLDRRRPGRSRITTPRKETDTCRIYSGVSEGVTTGTPIHVFGPNTDQR  371
            PRIPL+E+DLQFDLDRRRPG+SRITTPRKETDTCRI SGVSEG+TTGTPIHVF PNTDQR
Sbjct  81   PRIPLTESDLQFDLDRRRPGQSRITTPRKETDTCRISSGVSEGMTTGTPIHVFVPNTDQR  140

Query  372  GHDYNEMAIAYRPSHADATYDMKYggragkgggrssarETIGRVAPGA  515
            G DY+EM++AYRPSHADATYDMKYG R+ +GGGRSSARETIGRVAPGA
Sbjct  141  GLDYSEMSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGA  188


 Score = 45.4 bits (106),  Expect(2) = 8e-75
 Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 0/35 (0%)
 Frame = +1

Query  493  LGELPQGPIAKKILQQVSGTEGLAYVSQGHQVVLP  597
            +G +  G +AKKIL+Q +GTE LAYVSQ H VVLP
Sbjct  181  IGRVAPGALAKKILKQFAGTEILAYVSQVHHVVLP  215


>gi|79319526|ref|NP_001031157.1| UniGene infoGene info EMB1144; chorismate synthase [Arabidopsis thaliana]
Length=380

 Score =  255 bits (652),  Expect(2) = 8e-75
 Identities = 132/168 (78%), Positives = 153/168 (91%), Gaps = 0/168 (0%)
 Frame = +3

Query  12   SLSSDLQRLSFSSLHISVKPRTHKKLQIQAAGSTFGNYFRVTTFGESHGGGVGCIVDGCP  191
            SL S+L+RLS  ++ IS++ +T K  QIQA GS++G +FRV+TFGESHGGGVGCI+DGCP
Sbjct  21   SLPSELRRLSSPAVQISLRTQTRKNFQIQATGSSYGTHFRVSTFGESHGGGVGCIIDGCP  80

Query  192  PRIPLSEADLQFDLDRRRPGRSRITTPRKETDTCRIYSGVSEGVTTGTPIHVFGPNTDQR  371
            PRIPL+E+DLQFDLDRRRPG+SRITTPRKETDTCRI SGVSEG+TTGTPIHVF PNTDQR
Sbjct  81   PRIPLTESDLQFDLDRRRPGQSRITTPRKETDTCRISSGVSEGMTTGTPIHVFVPNTDQR  140

Query  372  GHDYNEMAIAYRPSHADATYDMKYggragkgggrssarETIGRVAPGA  515
            G DY+EM++AYRPSHADATYDMKYG R+ +GGGRSSARETIGRVAPGA
Sbjct  141  GLDYSEMSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGA  188


 Score = 45.4 bits (106),  Expect(2) = 8e-75
 Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 0/35 (0%)
 Frame = +1

Query  493  LGELPQGPIAKKILQQVSGTEGLAYVSQGHQVVLP  597
            +G +  G +AKKIL+Q +GTE LAYVSQ H VVLP
Sbjct  181  IGRVAPGALAKKILKQFAGTEILAYVSQVHHVVLP  215


>gi|79319550|ref|NP_001031158.1| UniGene infoGene info EMB1144; chorismate synthase [Arabidopsis thaliana]
Length=380

 Score =  255 bits (652),  Expect(2) = 8e-75
 Identities = 132/168 (78%), Positives = 153/168 (91%), Gaps = 0/168 (0%)
 Frame = +3

Query  12   SLSSDLQRLSFSSLHISVKPRTHKKLQIQAAGSTFGNYFRVTTFGESHGGGVGCIVDGCP  191
            SL S+L+RLS  ++ IS++ +T K  QIQA GS++G +FRV+TFGESHGGGVGCI+DGCP
Sbjct  21   SLPSELRRLSSPAVQISLRTQTRKNFQIQATGSSYGTHFRVSTFGESHGGGVGCIIDGCP  80

Query  192  PRIPLSEADLQFDLDRRRPGRSRITTPRKETDTCRIYSGVSEGVTTGTPIHVFGPNTDQR  371
            PRIPL+E+DLQFDLDRRRPG+SRITTPRKETDTCRI SGVSEG+TTGTPIHVF PNTDQR
Sbjct  81   PRIPLTESDLQFDLDRRRPGQSRITTPRKETDTCRISSGVSEGMTTGTPIHVFVPNTDQR  140

Query  372  GHDYNEMAIAYRPSHADATYDMKYggragkgggrssarETIGRVAPGA  515
            G DY+EM++AYRPSHADATYDMKYG R+ +GGGRSSARETIGRVAPGA
Sbjct  141  GLDYSEMSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGA  188


 Score = 45.4 bits (106),  Expect(2) = 8e-75
 Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 0/35 (0%)
 Frame = +1

Query  493  LGELPQGPIAKKILQQVSGTEGLAYVSQGHQVVLP  597
            +G +  G +AKKIL+Q +GTE LAYVSQ H VVLP
Sbjct  181  IGRVAPGALAKKILKQFAGTEILAYVSQVHHVVLP  215


>gi|76782200|gb|ABA54870.1|  putative chorismate synthase [Fagus sylvatica]
Length=434

 Score =  253 bits (646),  Expect(2) = 2e-73
 Identities = 138/167 (82%), Positives = 148/167 (88%), Gaps = 4/167 (2%)
 Frame = +3

Query  15   LSSDLQRLSFSSLHISVKPRTHKKLQIQAAGSTFGNYFRVTTFGESHGGGVGCIVDGCPP  194
            L SDL+     SLHIS +  T KKLQIQAAGST GNYFRVTTFGESHGGGVGCI+DGCPP
Sbjct  23   LPSDLR----PSLHISFRTSTPKKLQIQAAGSTHGNYFRVTTFGESHGGGVGCIIDGCPP  78

Query  195  RIPLSEADLQFDLDRRRPGRSRITTPRKETDTCRIYSGVSEGVTTGTPIHVFGPNTDQRG  374
            R+PLSEAD+Q DLDRRRPG+SRITTPRKETDTCRI SGVSEG+TTGTPI V  PNTDQRG
Sbjct  79   RLPLSEADMQVDLDRRRPGQSRITTPRKETDTCRILSGVSEGMTTGTPIAVLVPNTDQRG  138

Query  375  HDYNEMAIAYRPSHADATYDMKYggragkgggrssarETIGRVAPGA  515
            HDY+EM+IAYRPSHADATYDMKYG RA +GGGRSSARETIGRVA GA
Sbjct  139  HDYSEMSIAYRPSHADATYDMKYGVRAVQGGGRSSARETIGRVAAGA  185


 Score = 43.5 bits (101),  Expect(2) = 2e-73
 Identities = 20/35 (57%), Positives = 27/35 (77%), Gaps = 0/35 (0%)
 Frame = +1

Query  493  LGELPQGPIAKKILQQVSGTEGLAYVSQGHQVVLP  597
            +G +  G +AKKIL+ ++GTE  AYVSQ H+VVLP
Sbjct  178  IGRVAAGAVAKKILKSLAGTEIFAYVSQVHKVVLP  212


>gi|12321114|gb|AAG50662.1|AC084242_6  chorismate synthase, putative [Arabidopsis thaliana]
Length=435

 Score =  249 bits (635),  Expect(2) = 8e-73
 Identities = 131/168 (77%), Positives = 152/168 (90%), Gaps = 1/168 (0%)
 Frame = +3

Query  12   SLSSDLQRLSFSSLHISVKPRTHKKLQIQAAGSTFGNYFRVTTFGESHGGGVGCIVDGCP  191
            SL S+L+RLS  ++ IS++ +T K  QIQA GS++G +FRV+TFGESHGGGVGCI+DGCP
Sbjct  21   SLPSELRRLSSPAVQISLRTQTRKNFQIQATGSSYGTHFRVSTFGESHGGGVGCIIDGCP  80

Query  192  PRIPLSEADLQFDLDRRRPGRSRITTPRKETDTCRIYSGVSEGVTTGTPIHVFGPNTDQR  371
            PRIPL+E+DLQFDLDRR PG+SRITTPRKETDTCRI SGVSEG+TTGTPIHVF PNTDQR
Sbjct  81   PRIPLTESDLQFDLDRR-PGQSRITTPRKETDTCRISSGVSEGMTTGTPIHVFVPNTDQR  139

Query  372  GHDYNEMAIAYRPSHADATYDMKYggragkgggrssarETIGRVAPGA  515
            G DY+EM++AYRPSHADATYDMKYG R+ +GGGRSSARETIGRVAPGA
Sbjct  140  GLDYSEMSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGA  187


 Score = 45.4 bits (106),  Expect(2) = 8e-73
 Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 0/35 (0%)
 Frame = +1

Query  493  LGELPQGPIAKKILQQVSGTEGLAYVSQGHQVVLP  597
            +G +  G +AKKIL+Q +GTE LAYVSQ H VVLP
Sbjct  180  IGRVAPGALAKKILKQFAGTEILAYVSQVHHVVLP  214


>gi|11094811|gb|AAG29740.1|AC084414_8  chorismate synthase precursor, putative, 3' partial [Arabidopsis 
thaliana]
Length=305

 Score =  249 bits (635),  Expect(2) = 8e-73
 Identities = 131/168 (77%), Positives = 152/168 (90%), Gaps = 1/168 (0%)
 Frame = +3

Query  12   SLSSDLQRLSFSSLHISVKPRTHKKLQIQAAGSTFGNYFRVTTFGESHGGGVGCIVDGCP  191
            SL S+L+RLS  ++ IS++ +T K  QIQA GS++G +FRV+TFGESHGGGVGCI+DGCP
Sbjct  21   SLPSELRRLSSPAVQISLRTQTRKNFQIQATGSSYGTHFRVSTFGESHGGGVGCIIDGCP  80

Query  192  PRIPLSEADLQFDLDRRRPGRSRITTPRKETDTCRIYSGVSEGVTTGTPIHVFGPNTDQR  371
            PRIPL+E+DLQFDLDRR PG+SRITTPRKETDTCRI SGVSEG+TTGTPIHVF PNTDQR
Sbjct  81   PRIPLTESDLQFDLDRR-PGQSRITTPRKETDTCRISSGVSEGMTTGTPIHVFVPNTDQR  139

Query  372  GHDYNEMAIAYRPSHADATYDMKYggragkgggrssarETIGRVAPGA  515
            G DY+EM++AYRPSHADATYDMKYG R+ +GGGRSSARETIGRVAPGA
Sbjct  140  GLDYSEMSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGA  187


 Score = 45.4 bits (106),  Expect(2) = 8e-73
 Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 0/35 (0%)
 Frame = +1

Query  493  LGELPQGPIAKKILQQVSGTEGLAYVSQGHQVVLP  597
            +G +  G +AKKIL+Q +GTE LAYVSQ H VVLP
Sbjct  180  IGRVAPGALAKKILKQFAGTEILAYVSQVHHVVLP  214


>gi|2492952|sp|Q42884|AROC1_LYCES Gene info Chorismate synthase 1, chloroplast precursor (5-enolpyruvylshikimate-3-phosphate 
phospholyase 1)
 gi|410482|emb|CAA79859.1| UniGene infoGene info chorismate synthase 1 [Solanum lycopersicum]
Length=440

 Score =  234 bits (598),  Expect(2) = 2e-68
 Identities = 120/161 (74%), Positives = 143/161 (88%), Gaps = 0/161 (0%)
 Frame = +3

Query  33   RLSFSSLHISVKPRTHKKLQIQAAGSTFGNYFRVTTFGESHGGGVGCIVDGCPPRIPLSE  212
            + S S+ H+  +P   K+L+IQAAGSTFGNYFRVTTFGESHGGGVGCI+DGCPPR+PLSE
Sbjct  32   KFSSSNFHLPSRPSQLKRLEIQAAGSTFGNYFRVTTFGESHGGGVGCIIDGCPPRLPLSE  91

Query  213  ADLQFDLDRRRPGRSRITTPRKETDTCRIYSGVSEGVTTGTPIHVFGPNTDQRGHDYNEM  392
            +D+Q +LDRRRPG+SRITTPRKETDTC+I SG ++G+TTG+PI V  PNTDQRG+DY+EM
Sbjct  92   SDMQVELDRRRPGQSRITTPRKETDTCKISSGTADGLTTGSPIKVEVPNTDQRGNDYSEM  151

Query  393  AIAYRPSHADATYDMKYggragkgggrssarETIGRVAPGA  515
            ++AYRPSHADATYD KYG R+ +GGGRSSARETIGRVA GA
Sbjct  152  SLAYRPSHADATYDFKYGVRSVQGGGRSSARETIGRVAAGA  192


 Score = 44.7 bits (104),  Expect(2) = 2e-68
 Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 0/35 (0%)
 Frame = +1

Query  493  LGELPQGPIAKKILQQVSGTEGLAYVSQGHQVVLP  597
            +G +  G +AKKIL+  SG E LAYVSQ HQVVLP
Sbjct  185  IGRVAAGAVAKKILKLYSGAEVLAYVSQVHQVVLP  219


>gi|2492953|sp|Q42885|AROC2_LYCES Gene info Chorismate synthase 2, chloroplast precursor (5-enolpyruvylshikimate-3-phosphate 
phospholyase 2)
 gi|410484|emb|CAA79854.1| UniGene infoGene info chorismate synthase 2 [Solanum lycopersicum]
Length=431

 Score =  227 bits (579),  Expect(2) = 5e-66
 Identities = 118/161 (73%), Positives = 140/161 (86%), Gaps = 0/161 (0%)
 Frame = +3

Query  33   RLSFSSLHISVKPRTHKKLQIQAAGSTFGNYFRVTTFGESHGGGVGCIVDGCPPRIPLSE  212
            +L  S+L         K+L+IQAAG+TFGNYFRVTTFGESHGGGVGCI+DGCPPR+PLSE
Sbjct  26   KLCSSNLRFPTHRSQPKRLEIQAAGNTFGNYFRVTTFGESHGGGVGCIIDGCPPRLPLSE  85

Query  213  ADLQFDLDRRRPGRSRITTPRKETDTCRIYSGVSEGVTTGTPIHVFGPNTDQRGHDYNEM  392
            +D+Q +LDRRRPG+SRITTPRKETDTC+I SG ++G+TTG+PI V  PNTDQRG+DY+EM
Sbjct  86   SDMQVELDRRRPGQSRITTPRKETDTCKISSGTADGLTTGSPIKVEVPNTDQRGNDYSEM  145

Query  393  AIAYRPSHADATYDMKYggragkgggrssarETIGRVAPGA  515
            ++AYRPSHADATYD KYG R+ +GGGRSSARETIGRVA GA
Sbjct  146  SLAYRPSHADATYDFKYGVRSVQGGGRSSARETIGRVAAGA  186


 Score = 44.3 bits (103),  Expect(2) = 5e-66
 Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 0/35 (0%)
 Frame = +1

Query  493  LGELPQGPIAKKILQQVSGTEGLAYVSQGHQVVLP  597
            +G +  G +AKKIL+  SGTE LAYVSQ H VVLP
Sbjct  179  IGRVAAGAVAKKILKLYSGTEILAYVSQVHNVVLP  213


>gi|115451975|ref|NP_001049588.1| Gene info Os03g0254800 [Oryza sativa (japonica cultivar-group)]
 gi|108707229|gb|ABF95024.1| Gene info Chorismate synthase 2, chloroplast precursor, putative, expressed 
[Oryza sativa (japonica cultivar-group)]
 gi|113548059|dbj|BAF11502.1| Gene info Os03g0254800 [Oryza sativa (japonica cultivar-group)]
Length=438

 Score =  223 bits (567),  Expect(2) = 2e-63
 Identities = 116/157 (73%), Positives = 135/157 (85%), Gaps = 0/157 (0%)
 Frame = +3

Query  45   SSLHISVKPRTHKKLQIQAAGSTFGNYFRVTTFGESHGGGVGCIVDGCPPRIPLSEADLQ  224
            +SL  SV  R   +L+++A+ + FGNYF+V T+GESHGGGVGC++ GCPPRIPL+EAD+Q
Sbjct  31   ASLRFSVGRRRAARLEVKASANVFGNYFQVATYGESHGGGVGCVISGCPPRIPLTEADMQ  90

Query  225  FDLDRRRPGRSRITTPRKETDTCRIYSGVSEGVTTGTPIHVFGPNTDQRGHDYNEMAIAY  404
             +LDRRRPG+SRITTPRKETDTC+I SG  EG+TTGTPIHVF PNTDQRG DY+EMA AY
Sbjct  91   VELDRRRPGQSRITTPRKETDTCKILSGTHEGMTTGTPIHVFVPNTDQRGGDYSEMAKAY  150

Query  405  RPSHADATYDMKYggragkgggrssarETIGRVAPGA  515
            RPSHADATYD KYG RA +GGGRSSARETIGRVA GA
Sbjct  151  RPSHADATYDFKYGVRAVQGGGRSSARETIGRVAAGA  187


 Score = 40.4 bits (93),  Expect(2) = 2e-63
 Identities = 20/35 (57%), Positives = 26/35 (74%), Gaps = 0/35 (0%)
 Frame = +1

Query  493  LGELPQGPIAKKILQQVSGTEGLAYVSQGHQVVLP  597
            +G +  G +AKKIL+  SG E LA+VS+ HQVVLP
Sbjct  180  IGRVAAGALAKKILKLKSGVEILAFVSKVHQVVLP  214


>gi|77547031|gb|ABA90483.1| UniGene infoGene info chorismate synthase [Glycine max]
Length=436

 Score =  238 bits (608),  Expect = 1e-62
 Identities = 132/209 (63%), Positives = 157/209 (75%), Gaps = 2/209 (0%)
 Frame = +3

Query  12   SLSSDLQRLSFSSLHISVKPRTHKKLQIQAAGSTFGNYFRVTTFGESHGGGVGCIVDGCP  191
            SL+ DL+  S   L +S+ PR  K+L I AAGS +GN+F V+T+GESHGGGVGCI+DGCP
Sbjct  21   SLNPDLRSFSPGYLRLSLHPRLPKRLHIPAAGSIYGNHFLVSTYGESHGGGVGCIIDGCP  80

Query  192  PRIPLSEADLQFDLDRRRPGRSRITTPRKETDTCRIYSGVSEGVTTGTPIHVFGPNTDQR  371
            P +PLSEAD+Q DLD+RRP +S ITTPRKETDTC+I+SGVSEG+TT TPIHVF PNTDQR
Sbjct  81   PHLPLSEADMQLDLDKRRPCQSLITTPRKETDTCKIFSGVSEGLTTATPIHVFVPNTDQR  140

Query  372  GHDYNEMAIAYRPSHADATYDMKYggragkgggrssarETIGRVAPGAYC*ENSPAGFRN  551
             HDY EMA+AYRPSHADATYDMKYG  + +GGGRSSARETIGRVA GA   +     F  
Sbjct  141  RHDYTEMAVAYRPSHADATYDMKYGVTSVQGGGRSSARETIGRVASGAVA-KKILKDFSG  199

Query  552  *RSCLCLARSPGCA-PDGSVGHDTLTLDQ  635
                  +++      P   + HDTLTLDQ
Sbjct  200  TEILAYVSQVYNIVLPHDLIDHDTLTLDQ  228


>gi|114182|sp|P27793|AROC_CORSE  Chorismate synthase, chloroplast precursor (5-enolpyruvylshikimate-3-phosphate 
phospholyase)
 gi|18256|emb|CAA43034.1|  chorismate synthase [Corydalis sempervirens]
Length=447

 Score =  237 bits (604),  Expect = 3e-62
 Identities = 131/207 (63%), Positives = 161/207 (77%), Gaps = 1/207 (0%)
 Frame = +3

Query  18   SSDLQRLSFSSLHISVKPRTHK-KLQIQAAGSTFGNYFRVTTFGESHGGGVGCIVDGCPP  194
            +SDL++LS  S+ ISV+ +T   KL +QA+GS+FG  F+VTT+GESHGGGVGC++DGCPP
Sbjct  30   TSDLRQLSNQSVQISVRRQTAPLKLVVQASGSSFGKVFQVTTYGESHGGGVGCVIDGCPP  89

Query  195  RIPLSEADLQFDLDRRRPGRSRITTPRKETDTCRIYSGVSEGVTTGTPIHVFGPNTDQRG  374
            R P+SEAD+Q DLDRRRPG+SRITTPRKETDTC+IYSGV++G TTG+PIH+  PNTDQRG
Sbjct  90   RFPISEADIQSDLDRRRPGQSRITTPRKETDTCKIYSGVADGFTTGSPIHISVPNTDQRG  149

Query  375  HDYNEMAIAYRPSHADATYDMKYggragkgggrssarETIGRVAPGAYC*ENSPAGFRN*  554
            +DY+EMA AYRPSHADATYD KYG R+ +GGGRSSARETIGRVA GA   +   A     
Sbjct  150  NDYSEMAKAYRPSHADATYDFKYGVRSVQGGGRSSARETIGRVAAGALAKKILKAYAGTE  209

Query  555  RSCLCLARSPGCAPDGSVGHDTLTLDQ  635
                         P+G V H+TL+L+Q
Sbjct  210  VLAYVSQAHKVVLPEGLVDHETLSLEQ  236


>gi|46093430|dbj|BAD14928.1| UniGene info chorismate synthase [Oryza sativa (japonica cultivar-group)]
Length=219

 Score =  207 bits (528),  Expect = 2e-53
 Identities = 116/163 (71%), Positives = 128/163 (78%), Gaps = 0/163 (0%)
 Frame = +3

Query  147  ESHGGGVGCIVDGCPPRIPLSEADLQFDLDRRRPGRSRITTPRKETDTCRIYSGVSEGVT  326
            ESHGGGVGCI+DGCPPRIPLSEAD+QFDLDRRRPG+SRITTPRKETDTC+I SGVSEG+T
Sbjct  1    ESHGGGVGCIIDGCPPRIPLSEADMQFDLDRRRPGQSRITTPRKETDTCKISSGVSEGLT  60

Query  327  TGTPIHVFGPNTDQRGHDYNEMAIAYRPSHADATYDMKYggragkgggrssarETIGRVA  506
            TGTPIHVF PNTDQRG DY+EM++AYRPSHADATYDMKYG R+ +GGGRSSARETIGRVA
Sbjct  61   TGTPIHVFVPNTDQRGLDYSEMSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVA  120

Query  507  PGAYC*ENSPAGFRN*RSCLCLARSPGCAPDGSVGHDTLTLDQ  635
             G                           P+G V HD+LTLDQ
Sbjct  121  AGGVAKXILKLYAGTEILAYVSQVHKVVLPEGVVDHDSLTLDQ  163


>gi|116061759|emb|CAL52477.1|  S40409 chorismate synthase (ISS) [Ostreococcus tauri]
Length=467

 Score =  184 bits (466),  Expect = 3e-46
 Identities = 101/139 (72%), Positives = 114/139 (82%), Gaps = 1/139 (0%)
 Frame = +3

Query  102  AGSTFGNYFRVTTFGESHGGGVGCIVDGCPPRIPLSEADLQFDLDRRRPGRSRITTPRKE  281
            AG++FG  FRVTTFGESHGGGVGC+VDG PPR+ L+  +LQF+LDRRRPG+SRITTPR E
Sbjct  59   AGNSFGRIFRVTTFGESHGGGVGCVVDGVPPRLALTREELQFELDRRRPGQSRITTPRNE  118

Query  282  TDTCRIYSGVS-EGVTTGTPIHVFGPNTDQRGHDYNEMAIAYRPSHADATYDMKYggrag  458
             D+C I SGV  +G+T GTPI V   N DQR  DY E+A+AYRPSHADATYDMKYG RA 
Sbjct  119  EDSCEILSGVGLDGITLGTPIAVVVRNKDQRSQDYGEIAVAYRPSHADATYDMKYGVRAI  178

Query  459  kgggrssarETIGRVAPGA  515
             GGGRSSARETIGRVA GA
Sbjct  179  AGGGRSSARETIGRVAAGA  197


 Score = 36.2 bits (82),  Expect = 0.11
 Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
 Frame = +1

Query  448  AGQGRVGVDLQPEKPLGELPQGPIAKKILQQVSGTEGLAYVS  573
            AG GR        + +G +  G IAKK+L++V+GTE LAYVS
Sbjct  179  AGGGRSSA----RETIGRVAAGAIAKKVLKEVAGTEILAYVS  216


>gi|30693071|ref|NP_851101.1| UniGene infoGene info binding [Arabidopsis thaliana]
 gi|20260634|gb|AAM13215.1| UniGene infoGene info unknown protein [Arabidopsis thaliana]
 gi|31711878|gb|AAP68295.1| UniGene infoGene info At5g37370 [Arabidopsis thaliana]
Length=393

 Score = 34.3 bits (77),  Expect = 0.40
 Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 0/30 (0%)
 Frame = -1

Query  272  RGSNSAPTWPPSVKIKLQISF*QRNPRRAS  183
            RGS      PPSVK  L +SF QR P RAS
Sbjct  188  RGSEDTARRPPSVKASLSVSFGQRAPHRAS  217


>gi|13924509|gb|AAK49035.1|AF249733_1 UniGene info putative SR-like splicing factor [Arabidopsis thaliana]
Length=225

 Score = 34.3 bits (77),  Expect = 0.40
 Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 0/30 (0%)
 Frame = -1

Query  272  RGSNSAPTWPPSVKIKLQISF*QRNPRRAS  183
            RGS      PPSVK  L +SF QR P RAS
Sbjct  20   RGSEDTARRPPSVKASLSVSFGQRAPHRAS  49


>gi|30693073|ref|NP_198553.2| UniGene infoGene info binding [Arabidopsis thaliana]
 gi|9758723|dbj|BAB09109.1| Gene info unnamed protein product [Arabidopsis thaliana]
Length=385

 Score = 34.3 bits (77),  Expect = 0.40
 Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 0/30 (0%)
 Frame = -1

Query  272  RGSNSAPTWPPSVKIKLQISF*QRNPRRAS  183
            RGS      PPSVK  L +SF QR P RAS
Sbjct  180  RGSEDTARRPPSVKASLSVSFGQRAPHRAS  209


>gi|119638458|gb|ABL85049.1|  hypothetical protein 57h21.24 [Brachypodium sylvaticum]
Length=394

 Score = 32.7 bits (73),  Expect = 1.2
 Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 0/29 (0%)
 Frame = -1

Query  269  GSNSAPTWPPSVKIKLQISF*QRNPRRAS  183
            GS+     PPSVK  L +SF QR P RAS
Sbjct  189  GSDDTARRPPSVKASLSVSFGQRAPHRAS  217


>gi|115462403|ref|NP_001054801.1| Gene info Os05g0178900 [Oryza sativa (japonica cultivar-group)]
 gi|113578352|dbj|BAF16715.1| Gene info Os05g0178900 [Oryza sativa (japonica cultivar-group)]
Length=434

 Score = 32.3 bits (72),  Expect = 1.5
 Identities = 16/29 (55%), Positives = 17/29 (58%), Gaps = 0/29 (0%)
 Frame = -1

Query  269  GSNSAPTWPPSVKIKLQISF*QRNPRRAS  183
            GS      PPSVK  L +SF QR P RAS
Sbjct  189  GSEDTARRPPSVKASLSVSFGQRAPHRAS  217


>gi|42566389|ref|NP_192760.2| UniGene infoGene info unknown protein [Arabidopsis thaliana]
Length=400

 Score = 31.6 bits (70),  Expect = 2.6
 Identities = 45/168 (26%), Positives = 60/168 (35%), Gaps = 41/168 (24%)
 Frame = +3

Query  54   HISVKPRT--HKKLQIQAAGSTFGNY-FRVTTFGESHGGGVGCIVDGCP-PRIPLSEADL  221
            H S+K  T  HK     + GS       R TTFG     GVGC +   P PR+   +A L
Sbjct  84   HSSMKNHTFHHKMRMSYSEGSKMKRKTHRNTTFGHFWENGVGCPIGTVPIPRV-TKDALL  142

Query  222  Q---FDLDRRRPGRSRITTPR-------------KETDTCRIYSGVSEGVTTGTP-----  338
            +   FD D   P  S   T +             + T   R Y+G S  + T TP     
Sbjct  143  RMKSFDSDNSNPQSSWSKTYKPASSIDDHHFAVVRTTKGTRSYNGASMNINTFTPSVGPM  202

Query  339  ---------------IHVFGPNTDQRGHDYNEMAIAYRPSHADATYDM  437
                           I V      Q  HD+N     +  S  +A Y++
Sbjct  203  QFSASRMHFQIGNEFIQVGWIVHPQLYHDFNSRIFVFTKSGGNACYNL  250


>gi|115442331|ref|NP_001045445.1| Gene info Os01g0957100 [Oryza sativa (japonica cultivar-group)]
 gi|113534976|dbj|BAF07359.1| Gene info Os01g0957100 [Oryza sativa (japonica cultivar-group)]
Length=923

 Score = 31.2 bits (69),  Expect = 3.4
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query  237  RRRPGRSRITTPRKETDTCRIYSGVSEGVTTGTPIHVFGPNTDQRGHDY  383
            RRR G    TTP KE ++    S  S  + TG  +  FGP    R  D+
Sbjct  575  RRRAGDGGTTTPEKELESIVSSSTKSSKLATGKMV-TFGPGNSLRSEDF  622


>gi|20805201|dbj|BAB92869.1| Gene info putative receptor-like protein kinase [Oryza sativa (japonica 
cultivar-group)]
Length=1013

 Score = 31.2 bits (69),  Expect = 3.4
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query  237  RRRPGRSRITTPRKETDTCRIYSGVSEGVTTGTPIHVFGPNTDQRGHDY  383
            RRR G    TTP KE ++    S  S  + TG  +  FGP    R  D+
Sbjct  665  RRRAGDGGTTTPEKELESIVSSSTKSSKLATGKMV-TFGPGNSLRSEDF  712


>gi|47497408|dbj|BAD19445.1| Gene info MADS box interactor-like [Oryza sativa (japonica cultivar-group)]
Length=122

 Score = 31.2 bits (69),  Expect = 3.4
 Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 0/29 (0%)
 Frame = +3

Query  156  GGGVGCIVDGCPPRIPLSEADLQFDLDRR  242
            GG  GC  +G PP  P SEAD + D  RR
Sbjct  78   GGSDGCDEEGAPPPSPPSEADYETDEVRR  106


>gi|37921345|gb|AAP55675.1|  geranylgeranyl reductase [Prunus persica]
Length=466

 Score = 30.4 bits (67),  Expect = 5.8
 Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 24/109 (22%)
 Frame = +3

Query  18   SSDLQRLSFSSLHISVKPRTHKKLQIQAAGST---FGNYFRVTTFGESHGGG--------  164
            S++    +  +  IS+ P  H++LQ+ AA ++    G   RV   G    GG        
Sbjct  16   SAEKPHFTIQAKPISLNPSIHRRLQVNAAKTSPKVTGRNLRVAVVGGGPAGGSAAETLAK  75

Query  165  -------VGCIVDGCPP---RIPL---SEADLQFDLDRRRPGRSRITTP  272
                   +   +D C P    IPL    E DL  D+  RR  + ++ +P
Sbjct  76   GGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMISP  124


>gi|115484773|ref|NP_001067530.1| Gene info Os11g0223400 [Oryza sativa (japonica cultivar-group)]
 gi|113644752|dbj|BAF27893.1| Gene info Os11g0223400 [Oryza sativa (japonica cultivar-group)]
Length=315

 Score = 29.6 bits (65),  Expect = 9.8
 Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 0/64 (0%)
 Frame = +3

Query  135  TTFGESHGGGVGCIVDGCPPRIPLSEADLQFDLDRRRPGRSRITTPRKETDTCRIYSGVS  314
            T F  +HGGG  C   GC              + RR          R++TD C  + G  
Sbjct  36   TIFCRAHGGGKRCYYPGCTKSAEEHTDFCLAHISRRCMHEGCFRFARRKTDFCSKHGGGK  95

Query  315  EGVT  326
            +G T
Sbjct  96   KGET  99


>gi|115449065|ref|NP_001048312.1| Gene info Os02g0781700 [Oryza sativa (japonica cultivar-group)]
 gi|113537843|dbj|BAF10226.1| Gene info Os02g0781700 [Oryza sativa (japonica cultivar-group)]
Length=312

 Score = 29.6 bits (65),  Expect = 9.8
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 0/25 (0%)
 Frame = +3

Query  156  GGGVGCIVDGCPPRIPLSEADLQFD  230
            GG  GC  +G PP  P SEAD + D
Sbjct  125  GGSDGCDEEGAPPPSPPSEADYETD  149


>gi|29367481|gb|AAO72596.1| UniGene info unknown [Oryza sativa (japonica cultivar-group)]
Length=377

 Score = 29.6 bits (65),  Expect = 9.8
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 0/25 (0%)
 Frame = +3

Query  156  GGGVGCIVDGCPPRIPLSEADLQFD  230
            GG  GC  +G PP  P SEAD + D
Sbjct  134  GGSDGCDEEGAPPPSPPSEADYETD  158


>gi|7770339|gb|AAF69709.1|AC016041_14  F27J15.26 [Arabidopsis thaliana]
 gi|11094814|gb|AAG29743.1|AC084414_11  unknown protein [Arabidopsis thaliana]
Length=608

 Score = 29.6 bits (65),  Expect = 9.8
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 0/32 (0%)
 Frame = -1

Query  551  VPETCWRIFLAIGPWGNSPNGFSG*RSTPTLP  456
            +PET  R  L+I      PNG SG    PTLP
Sbjct  311  LPETATRELLSISESTPIPNGISGNNENPTLP  342


>gi|79361705|ref|NP_175325.2| UniGene infoGene info unknown protein [Arabidopsis thaliana]
Length=594

 Score = 29.6 bits (65),  Expect = 9.8
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 0/32 (0%)
 Frame = -1

Query  551  VPETCWRIFLAIGPWGNSPNGFSG*RSTPTLP  456
            +PET  R  L+I      PNG SG    PTLP
Sbjct  297  LPETATRELLSISESTPIPNGISGNNENPTLP  328


>gi|62733742|gb|AAX95851.1|  NB-ARC domain, putative [Oryza sativa (japonica cultivar-group)]
 gi|77549351|gb|ABA92148.1|  NB-ARC domain containing protein, expressed [Oryza sativa (japonica 
cultivar-group)]
Length=1437

 Score = 29.6 bits (65),  Expect = 9.8
 Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 0/64 (0%)
 Frame = +3

Query  135   TTFGESHGGGVGCIVDGCPPRIPLSEADLQFDLDRRRPGRSRITTPRKETDTCRIYSGVS  314
             T F  +HGGG  C   GC              + RR          R++TD C  + G  
Sbjct  1158  TIFCRAHGGGKRCYYPGCTKSAEEHTDFCLAHISRRCMHEGCFRFARRKTDFCSKHGGGK  1217

Query  315   EGVT  326
             +G T
Sbjct  1218  KGET  1221


>gi|115482784|ref|NP_001064985.1| Gene info Os10g0501300 [Oryza sativa (japonica cultivar-group)]
 gi|22165054|gb|AAM93671.1| Gene info putative leaf protein [Oryza sativa (japonica cultivar-group)]
 gi|31432901|gb|AAP54477.1| Gene info pentatricopeptide, putative, expressed [Oryza sativa (japonica 
cultivar-group)]
 gi|113639594|dbj|BAF26899.1| Gene info Os10g0501300 [Oryza sativa (japonica cultivar-group)]
Length=513

 Score = 29.6 bits (65),  Expect = 9.8
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 8/43 (18%)
 Frame = -2

Query  271  GVVIRLRPGLLRSRSNCKSASDRGILGGHPSTIQPTPPPCDSP  143
            G+++ LR GLLR R        RG+      T+ P+PPP   P
Sbjct  7    GLLLHLRGGLLRRR--------RGLSVSAEETVSPSPPPPPPP  41


>gi|47497407|dbj|BAD19444.1| Gene info MADS box interactor-like [Oryza sativa (japonica cultivar-group)]
Length=265

 Score = 29.6 bits (65),  Expect = 9.8
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 0/25 (0%)
 Frame = +3

Query  156  GGGVGCIVDGCPPRIPLSEADLQFD  230
            GG  GC  +G PP  P SEAD + D
Sbjct  78   GGSDGCDEEGAPPPSPPSEADYETD  102







  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 559
Number of extensions: 2
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 647
Length of database: 101054579
Length adjustment: 109
Effective length of query: 538
Effective length of database: 70169538
Effective search space: 7437971028
Effective search space used: 7437971028
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 65 (29.6 bits)