RID=1168930833-19790-148229549362.BLASTQ4, Contig149

Alignments
 

>gi|18422548|ref|NP_568644.1|  CLPP4; endopeptidase Clp [Arabidopsis thaliana]
 gi|14596089|gb|AAK68772.1|  ATP-dependent Clp protease-like protein [Arabidopsis thaliana]
 gi|30023792|gb|AAP13429.1|  At5g45390 [Arabidopsis thaliana]
Length=292

 Score =  104 bits (260),  Expect = 8e-23
 Identities = 52/59 (88%), Positives = 57/59 (96%), Gaps = 0/59 (0%)
 Frame = -2

Query  177  MGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            MGLLLRERIVFLG++IDDFVADAI+SQLLLLDA+DP KDI+LFIN PGGSLSATMAIYD
Sbjct  81   MGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYD  139


>gi|21593305|gb|AAM65254.1|  ATP-dependent Clp protease proteolytic subunit (ClpP4) [Arabidopsis 
thaliana]
Length=292

 Score =  104 bits (260),  Expect = 8e-23
 Identities = 52/59 (88%), Positives = 57/59 (96%), Gaps = 0/59 (0%)
 Frame = -2

Query  177  MGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            MGLLLRERIVFLG++IDDFVADAI+SQLLLLDA+DP KDI+LFIN PGGSLSATMAIYD
Sbjct  81   MGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYD  139


>gi|4454056|emb|CAA04393.1|  ClpP [Arabidopsis thaliana]
Length=228

 Score =  104 bits (260),  Expect = 8e-23
 Identities = 52/59 (88%), Positives = 57/59 (96%), Gaps = 0/59 (0%)
 Frame = -2

Query  177  MGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            MGLLLRERIVFLG++IDDFVADAI+SQLLLLDA+DP KDI+LFIN PGGSLSATMAIYD
Sbjct  17   MGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYD  75


>gi|5360593|dbj|BAA82068.1|  nClpP4 [Arabidopsis thaliana]
Length=299

 Score =  104 bits (260),  Expect = 8e-23
 Identities = 52/59 (88%), Positives = 57/59 (96%), Gaps = 0/59 (0%)
 Frame = -2

Query  177  MGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            MGLLLRERIVFLG++IDDFVADAI+SQLLLLDA+DP KDI+LFIN PGGSLSATMAIYD
Sbjct  88   MGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYD  146


>gi|115483692|ref|NP_001065516.1|  Os10g0580800 [Oryza sativa (japonica cultivar-group)]
 gi|12039365|gb|AAG46151.1|AC018727_3  putative Clp protease [Oryza sativa]
 gi|31433719|gb|AAP55198.1|  ATP-dependent Clp protease proteolytic subunit 3, putative, expressed 
[Oryza sativa (japonica cultivar-group)]
 gi|113640048|dbj|BAF27353.1|  Os10g0580800 [Oryza sativa (japonica cultivar-group)]
Length=293

 Score =  103 bits (258),  Expect = 1e-22
 Identities = 50/59 (84%), Positives = 55/59 (93%), Gaps = 0/59 (0%)
 Frame = -2

Query  177  MGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            MGLLLRERIVFLGN I+DF+ADA++SQLLLLDA DPN DIRLF+N PGGSLSATMAIYD
Sbjct  82   MGLLLRERIVFLGNEIEDFLADAVVSQLLLLDAVDPNSDIRLFVNSPGGSLSATMAIYD  140


>gi|9758729|dbj|BAB09167.1|  ATP-dependent Clp protease-like protein [Arabidopsis thaliana]
Length=301

 Score = 97.1 bits (240),  Expect = 2e-20
 Identities = 52/68 (76%), Positives = 57/68 (83%), Gaps = 9/68 (13%)
 Frame = -2

Query  177  MGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSL---------  25
            MGLLLRERIVFLG++IDDFVADAI+SQLLLLDA+DP KDI+LFIN PGGSL         
Sbjct  81   MGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLRLNVVIVWF  140

Query  24   SATMAIYD  1
            SATMAIYD
Sbjct  141  SATMAIYD  148


>gi|116057741|emb|CAL53944.1|  ATP-dependent Clp protease, proteolytic subunit (ISS) [Ostreococcus 
tauri]
Length=306

 Score = 86.7 bits (213),  Expect = 2e-17
 Identities = 41/58 (70%), Positives = 49/58 (84%), Gaps = 0/58 (0%)
 Frame = -2

Query  174  GLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            G LL+ RIVFLG+ +DDF ADA+ISQLLLLD QDP K+I+LFIN PGGS++A M IYD
Sbjct  88   GALLKNRIVFLGHQVDDFNADAVISQLLLLDQQDPTKEIKLFINSPGGSVTAGMGIYD  145


>gi|7657879|emb|CAB89185.1|  ClpP [Brassica napus var. napus]
Length=313

 Score = 82.8 bits (203),  Expect = 3e-16
 Identities = 39/57 (68%), Positives = 47/57 (82%), Gaps = 0/57 (0%)
 Frame = -2

Query  171  LLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            +LLR+RIVFLG+ +DD  AD +ISQLLLLDAQD  +DI LFIN PGGS++A M IYD
Sbjct  93   MLLRQRIVFLGSQVDDMTADLVISQLLLLDAQDSERDITLFINSPGGSITAGMGIYD  149


>gi|15864561|emb|CAC80640.1|  ClpP putative protein [Brassica napus]
Length=313

 Score = 82.8 bits (203),  Expect = 3e-16
 Identities = 39/57 (68%), Positives = 47/57 (82%), Gaps = 0/57 (0%)
 Frame = -2

Query  171  LLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            +LLR+RIVFLG+ +DD  AD +ISQLLLLDAQD  +DI LFIN PGGS++A M IYD
Sbjct  93   MLLRQRIVFLGSQVDDMTADLVISQLLLLDAQDSERDITLFINSPGGSITAGMGIYD  149


>gi|17028170|gb|AAL34333.1|L41144_1  ClpP [Brassica oleracea]
Length=279

 Score = 82.8 bits (203),  Expect = 3e-16
 Identities = 39/57 (68%), Positives = 47/57 (82%), Gaps = 0/57 (0%)
 Frame = -2

Query  171  LLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            +LLR+RIVFLG+ +DD  AD +ISQLLLLDAQD  +DI LFIN PGGS++A M IYD
Sbjct  59   MLLRQRIVFLGSQVDDMTADLVISQLLLLDAQDSERDITLFINSPGGSITAGMGIYD  115


>gi|6069464|dbj|BAA85451.1|  S-locus protein 2 [Brassica rapa]
Length=311

 Score = 82.8 bits (203),  Expect = 3e-16
 Identities = 39/57 (68%), Positives = 47/57 (82%), Gaps = 0/57 (0%)
 Frame = -2

Query  171  LLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            +LLR+RIVFLG+ +DD  AD +ISQLLLLDAQD  +DI LFIN PGGS++A M IYD
Sbjct  91   MLLRQRIVFLGSQVDDMTADLVISQLLLLDAQDSERDITLFINSPGGSITAGMGIYD  147


>gi|115436866|ref|NP_001043155.1|  Os01g0507900 [Oryza sativa (japonica cultivar-group)]
 gi|113532686|dbj|BAF05069.1|  Os01g0507900 [Oryza sativa (japonica cultivar-group)]
Length=314

 Score = 82.4 bits (202),  Expect = 4e-16
 Identities = 39/57 (68%), Positives = 48/57 (84%), Gaps = 0/57 (0%)
 Frame = -2

Query  171  LLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            +LLR+RIVFLG+ +DD  AD IISQLLLLDA+D  KDI+LFIN PGGS++A M +YD
Sbjct  81   MLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINSPGGSITAGMGVYD  137


>gi|56201842|dbj|BAD73292.1|  putative ATP-dependent Clp protease, proteolytic subunit [Oryza 
sativa (japonica cultivar-group)]
Length=308

 Score = 82.4 bits (202),  Expect = 4e-16
 Identities = 39/57 (68%), Positives = 48/57 (84%), Gaps = 0/57 (0%)
 Frame = -2

Query  171  LLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            +LLR+RIVFLG+ +DD  AD IISQLLLLDA+D  KDI+LFIN PGGS++A M +YD
Sbjct  75   MLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINSPGGSITAGMGVYD  131


>gi|13899067|gb|AAK48955.1|AF370528_1  ATP-dependent Clp protease; nClpP3 [Arabidopsis thaliana]
 gi|18377550|gb|AAL66941.1|  ATP-dependent Clp protease (nClpP3) [Arabidopsis thaliana]
Length=309

 Score = 81.6 bits (200),  Expect = 7e-16
 Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 0/57 (0%)
 Frame = -2

Query  171  LLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            +LLR+RIVFLG+ +DD  AD +ISQLLLLDA+D  +DI LFIN PGGS++A M IYD
Sbjct  89   MLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYD  145


>gi|3599968|gb|AAC35489.1|  clp protease [Arabidopsis thaliana]
Length=310

 Score = 81.6 bits (200),  Expect = 7e-16
 Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 0/57 (0%)
 Frame = -2

Query  171  LLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            +LLR+RIVFLG+ +DD  AD +ISQLLLLDA+D  +DI LFIN PGGS++A M IYD
Sbjct  90   MLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYD  146


>gi|18408572|ref|NP_564880.1|  CLPP3; endopeptidase Clp [Arabidopsis thaliana]
 gi|12322291|gb|AAG51173.1|AC079285_6  ATP-dependent Clp protease (nClpP3) [Arabidopsis thaliana]
 gi|12597762|gb|AAG60075.1|AC013288_9  ATP-dependent Clp protease (nClpP3) [Arabidopsis thaliana]
 gi|5360591|dbj|BAA82067.1|  nClpP3 [Arabidopsis thaliana]
 gi|21592949|gb|AAM64899.1|  ATP-dependent Clp protease proteolytic subunit ClpP3 [Arabidopsis 
thaliana]
Length=309

 Score = 81.6 bits (200),  Expect = 7e-16
 Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 0/57 (0%)
 Frame = -2

Query  171  LLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            +LLR+RIVFLG+ +DD  AD +ISQLLLLDA+D  +DI LFIN PGGS++A M IYD
Sbjct  89   MLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYD  145


>gi|119358863|emb|CAL52310.2|  ClpP1 Clp protease proteolytic subunit ClpP (IC) [Ostreococcus 
tauri]
Length=252

 Score = 65.5 bits (158),  Expect = 5e-11
 Identities = 31/56 (55%), Positives = 43/56 (76%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L+ +RIV LG  +DD   + I++QLL LDA DP+KDI L+IN PGGS++A MA++D
Sbjct  66   LMSQRIVRLGGAVDDDGCNLIVAQLLWLDAADPDKDITLYINSPGGSVTAGMAVFD  121


>gi|115452603|ref|NP_001049902.1|  Os03g0308100 [Oryza sativa (japonica cultivar-group)]
 gi|113548373|dbj|BAF11816.1|  Os03g0308100 [Oryza sativa (japonica cultivar-group)]
Length=312

 Score = 63.9 bits (154),  Expect = 2e-10
 Identities = 29/56 (51%), Positives = 43/56 (76%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L + RI+  G  ++D +A+ I++QLL LDA DPNKDI +++N PGGS++A MAI+D
Sbjct  132  LFQHRIIRCGGPVEDDMANIIVAQLLYLDAIDPNKDIIMYVNSPGGSVTAGMAIFD  187


>gi|63003513|dbj|BAD98161.1|  ATP-dependent protease [Oryza sativa (japonica cultivar-group)]
 gi|108707751|gb|ABF95546.1|  ATP-dependent Clp protease proteolytic subunit 1, putative, expressed 
[Oryza sativa (japonica cultivar-group)]
Length=282

 Score = 63.9 bits (154),  Expect = 2e-10
 Identities = 29/56 (51%), Positives = 43/56 (76%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L + RI+  G  ++D +A+ I++QLL LDA DPNKDI +++N PGGS++A MAI+D
Sbjct  102  LFQHRIIRCGGPVEDDMANIIVAQLLYLDAIDPNKDIIMYVNSPGGSVTAGMAIFD  157


>gi|15485610|emb|CAC67407.1|  Clp protease 2 proteolytic subunit [Solanum lycopersicum]
Length=299

 Score = 62.8 bits (151),  Expect = 3e-10
 Identities = 28/56 (50%), Positives = 42/56 (75%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L + RI+  G  +DD +A+ I++QLL LDA DP KDI +++N PGGS++A MA++D
Sbjct  116  LFQYRIIRCGGAVDDDMANVIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAVFD  171


>gi|18378982|ref|NP_563657.1|  CLPP5 (NUCLEAR ENCODED CLP PROTEASE 1); endopeptidase Clp [Arabidopsis 
thaliana]
 gi|9972387|gb|AAG10637.1|AC022521_15  ATP-dependent Clp protease subunit ClpP [Arabidopsis thaliana]
 gi|4887543|emb|CAB43488.1|  ATP-dependent Clp protease subunit ClpP [Arabidopsis thaliana]
 gi|5360579|dbj|BAA82065.1|  nClpP1 [Arabidopsis thaliana]
 gi|21536639|gb|AAM60971.1|  ATP-dependent Clp protease proteolytic subunit ClpP5 [Arabidopsis 
thaliana]
 gi|89274139|gb|ABD65590.1|  At1g02560 [Arabidopsis thaliana]
Length=298

 Score = 62.8 bits (151),  Expect = 3e-10
 Identities = 29/56 (51%), Positives = 42/56 (75%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L + RI+  G  +DD +A+ I++QLL LDA DP KDI +++N PGGS++A MAI+D
Sbjct  119  LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFD  174


>gi|115453497|ref|NP_001050349.1|  Os03g0411500 [Oryza sativa (japonica cultivar-group)]
 gi|57222443|gb|AAO37504.2|  putative clp-like energy-dependent protease [Oryza sativa (japonica 
cultivar-group)]
 gi|108708774|gb|ABF96569.1|  Clp protease family protein, expressed [Oryza sativa (japonica 
cultivar-group)]
 gi|113548820|dbj|BAF12263.1|  Os03g0411500 [Oryza sativa (japonica cultivar-group)]
Length=259

 Score = 60.8 bits (146),  Expect = 1e-09
 Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 0/57 (0%)
 Frame = -2

Query  171  LLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            +LL  RI+F+G  I+  VA  +ISQL+ L A D   DI +++NCPGGSL + +AIYD
Sbjct  88   VLLGNRIIFIGQYINSQVAQRVISQLVTLAAVDEEADILIYLNCPGGSLYSILAIYD  144


>gi|602758|gb|AAA81878.1|  clp-like energy-dependent protease
Length=275

 Score = 60.8 bits (146),  Expect = 1e-09
 Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 0/57 (0%)
 Frame = -2

Query  171  LLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            +L R RI+F+G  ++  VA  +ISQL+ L   D N DI +++NCPGGS  + +AIYD
Sbjct  104  VLFRNRIIFIGQPVNSAVAQKVISQLVTLATIDENADILIYLNCPGGSTYSVLAIYD  160


>gi|34501388|ref|NP_904176.1|  ATP-dependent Clp protease proteolytic subunit [Physcomitrella 
patens subsp. patens]
 gi|68052159|sp|Q6YXM7|CLPP_PHYPA  ATP-dependent Clp protease proteolytic subunit (Endopeptidase 
Clp)
 gi|34494758|dbj|BAC85025.1|  ATP-dependent protease proteolytic subunit [Physcomitrella patens 
subsp. patens]
Length=199

 Score = 60.8 bits (146),  Expect = 1e-09
 Identities = 25/56 (44%), Positives = 43/56 (76%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L RER++FLG ++DD +A+ +I  ++ L+ +D NKD+ L+IN PGG++ A +++YD
Sbjct  28   LYRERLLFLGQHVDDEIANQLIGIMMYLNGEDENKDMYLYINSPGGAVLAGISVYD  83


>gi|108796785|ref|YP_636436.1|  proteolytic subunit 2 of clp protease [Staurastrum punctulatum]
 gi|61393553|gb|AAX45694.1|  proteolytic subunit 2 of clp protease [Staurastrum punctulatum]
Length=201

 Score = 60.1 bits (144),  Expect = 2e-09
 Identities = 24/56 (42%), Positives = 43/56 (76%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L RER++FLG N+DD +A+ +I  ++ L+ +D +KD+ ++IN PGG++ A +++YD
Sbjct  27   LYRERLLFLGQNVDDEIANQLIGIMIYLNGEDESKDMYMYINSPGGAVLAGISVYD  82


>gi|11466349|ref|NP_038352.1|  ATP-dependent Clp protease proteolytic subunit [Mesostigma viride]
 gi|12229759|sp|Q9MUV8|CLPP_MESVI  ATP-dependent Clp protease proteolytic subunit (Endopeptidase 
Clp)
 gi|7259492|gb|AAF43793.1|AF166114_5  proteolytic subunit 2 of clp protease [Mesostigma viride]
Length=229

 Score = 59.3 bits (142),  Expect = 4e-09
 Identities = 26/56 (46%), Positives = 41/56 (73%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L RERI+FLG ++DD VA+ +I  ++ L+++D  K I  +IN PGGS++A + +YD
Sbjct  27   LYRERILFLGEDLDDEVANQLIGVMVFLNSEDDTKGIFFYINSPGGSMNAGLGVYD  82


>gi|92887825|gb|ABE89066.1|  Peptidase S14, ClpP [Medicago truncatula]
Length=238

 Score = 58.9 bits (141),  Expect = 5e-09
 Identities = 25/56 (44%), Positives = 42/56 (75%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            LL+ERIV +   I D  A  +++QLL L++++P+K I +++N PGG+++A +AIYD
Sbjct  50   LLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYD  105


>gi|28202196|ref|NP_777437.1|  ATP-dependent Clp protease proteolytic subunit [Anthoceros formosae]
 gi|41688497|sp|Q85BZ1|CLPP_ANTFO  ATP-dependent Clp protease proteolytic subunit (Endopeptidase 
Clp)
 gi|27807898|dbj|BAC55373.1|  ATP-dependent protease proteolytic subunit exon3 [Anthoceros 
formosae]
 gi|27808041|dbj|BAC55470.1|  ATP-dependent protease proteolytic subunit [Anthoceros formosae]
Length=204

 Score = 58.9 bits (141),  Expect = 5e-09
 Identities = 24/56 (42%), Positives = 43/56 (76%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L RER++FLG ++DD +A+ +I  ++ L+ +D +KD+ L+IN PGG++ A +++YD
Sbjct  27   LYRERLLFLGQHVDDEIANQLIGIMMYLNGEDESKDMYLYINSPGGAVLAGISVYD  82


>gi|18391311|ref|NP_563893.1|  CLPP6; endopeptidase Clp [Arabidopsis thaliana]
 gi|4835782|gb|AAD30248.1|AC007296_9  Identical to gb|AF016621 ATP-dependent Clp protease proteolytic 
subunit from Arabidopsis thaliana and is a member of the 
PF|00574 CLP_protease family.  ESTs gb|F13836 and gb|F13997 
come from this gene
 gi|13194778|gb|AAK15551.1|AF348580_1  putative ATP-dependent Clp protease proteolytic subunit ClpP6 
[Arabidopsis thaliana]
 gi|21592854|gb|AAM64804.1|  ATP-dependent Clp protease proteolytic subunit (ClpP6) [Arabidopsis 
thaliana]
 gi|110737993|dbj|BAF00932.1|  putative ATP-dependent Clp protease proteolytic subunit [Arabidopsis 
thaliana]
Length=271

 Score = 58.5 bits (140),  Expect = 7e-09
 Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 0/57 (0%)
 Frame = -2

Query  171  LLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            +L R RI+F+G  I+  VA  +ISQL+ L + D   DI +++NCPGGS  + +AIYD
Sbjct  100  VLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAIYD  156


>gi|115466260|ref|NP_001056729.1|  Os06g0136800 [Oryza sativa (japonica cultivar-group)]
 gi|55296987|dbj|BAD68462.1|  putative ATP-dependent Clp protease proteolytic subunit [Oryza 
sativa (japonica cultivar-group)]
 gi|113594769|dbj|BAF18643.1|  Os06g0136800 [Oryza sativa (japonica cultivar-group)]
Length=297

 Score = 58.5 bits (140),  Expect = 7e-09
 Identities = 26/56 (46%), Positives = 41/56 (73%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L RERI+F+G++ID+  ++ +++ +L LD+ D  K I L+IN PGG L+  MA+YD
Sbjct  108  LYRERIIFIGDSIDEEFSNQVLASMLYLDSVDNTKKILLYINGPGGDLTPCMALYD  163


>gi|11466727|ref|NP_039323.1|  ATP-dependent Clp protease proteolytic subunit [Marchantia polymorpha]
 gi|116525|sp|P12208|CLPP_MARPO  ATP-dependent Clp protease proteolytic subunit (Endopeptidase 
Clp)
 gi|456519|emb|CAA28109.1|  unnamed protein product [Marchantia polymorpha]
Length=203

 Score = 58.5 bits (140),  Expect = 7e-09
 Identities = 24/56 (42%), Positives = 42/56 (75%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L RER++FLG  +DD +A+ +I  ++ L+ +D +KD+ L+IN PGG++ A +++YD
Sbjct  27   LYRERLLFLGQQVDDEIANQLIGIMMYLNGEDESKDMYLYINSPGGAVLAGISVYD  82


>gi|108744220|gb|ABD62181.1|  proteolytic subunit 2 of clp protease [Chlorokybus atmophyticus]
Length=196

 Score = 58.2 bits (139),  Expect = 9e-09
 Identities = 25/56 (44%), Positives = 41/56 (73%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L RERI+FLG ++DD VA+ +I  ++ L+++D  K I  +IN PGGS+++ + +YD
Sbjct  27   LYRERILFLGEDLDDEVANQLIGVMVFLNSEDDTKGIFFYINSPGGSMNSGLGVYD  82


>gi|2921510|gb|AAC04810.1|  clp-like energy-dependent protease [Fritillaria agrestis]
Length=267

 Score = 57.8 bits (138),  Expect = 1e-08
 Identities = 26/57 (45%), Positives = 38/57 (66%), Gaps = 0/57 (0%)
 Frame = -2

Query  171  LLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            +L R RI+F+G  ++  VA  +ISQL+ L   D   DI +++NCPGGS  + +AIYD
Sbjct  96   VLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYD  152


>gi|92884628|gb|ABE87427.1|  Peptidase S14, ClpP [Medicago truncatula]
Length=285

 Score = 57.4 bits (137),  Expect = 1e-08
 Identities = 25/56 (44%), Positives = 41/56 (73%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L RER++F+G  ID+ +++ I++ LL LD+ D +K + L+IN PGG L+  M++YD
Sbjct  100  LYRERVIFIGQEIDEELSNQILATLLYLDSVDNSKKLYLYINGPGGDLTPCMSLYD  155


>gi|9968665|emb|CAC06126.1|  putative ATP-dependent clp serine protease proteolytic subunit 
[Pisum sativum]
Length=246

 Score = 57.4 bits (137),  Expect = 1e-08
 Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 0/57 (0%)
 Frame = -2

Query  171  LLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            +L R RI+F+G  I+  +A  +ISQL+ L   DP+ DI ++INC GGS  + +A+YD
Sbjct  97   VLFRNRIIFIGQPINAQMAQRVISQLVTLATIDPDADILMYINCAGGSTYSVLAVYD  153


>gi|49574608|ref|NP_848084.2|  ATP-dependent Clp protease proteolytic subunit [Adiantum capillus-veneris]
 gi|68565049|sp|Q85FJ8|CLPP_ADICA  ATP-dependent Clp protease proteolytic subunit (Endopeptidase 
Clp)
 gi|48476019|gb|AAP29415.2|  ATP-dependent Clp protease proteolytic subunit [Adiantum capillus-veneris]
Length=200

 Score = 57.4 bits (137),  Expect = 1e-08
 Identities = 23/56 (41%), Positives = 42/56 (75%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L RER++FLG  +DD +A+ +I  ++ L+++D  KD+ L++N PGG++ A +++YD
Sbjct  27   LYRERLLFLGQQVDDEIANQLIGIMMYLNSEDQAKDMYLYVNSPGGAVLAGISVYD  82


>gi|18391391|ref|NP_563907.1|  CLPR2; endopeptidase Clp [Arabidopsis thaliana]
 gi|8778627|gb|AAF79635.1|AC025416_9  F5O11.13 [Arabidopsis thaliana]
 gi|5360589|dbj|BAA82066.1|  nClpP2 [Arabidopsis thaliana]
 gi|17065388|gb|AAL32848.1|  similar to nClpP2 [Arabidopsis thaliana]
 gi|20148625|gb|AAM10203.1|  similar to nClpP2 dbj|BAA82066.1 [Arabidopsis thaliana]
Length=279

 Score = 57.4 bits (137),  Expect = 1e-08
 Identities = 24/56 (42%), Positives = 41/56 (73%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L RER++F+G NID+  ++ I++ +L LD  D ++ I +++N PGG L+ ++AIYD
Sbjct  94   LYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPGGDLTPSLAIYD  149


>gi|108773366|ref|YP_635828.1|  proteolytic subunit 2 of clp protease [Oltmannsiellopsis viridis]
 gi|82541948|gb|ABB81989.1|  proteolytic subunit 2 of clp protease [Oltmannsiellopsis viridis]
Length=195

 Score = 57.0 bits (136),  Expect = 2e-08
 Identities = 24/56 (42%), Positives = 43/56 (76%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L RER++FL  ++DD +A+ +I  +L L+A++ +KD+ ++IN PGGS++  +A+YD
Sbjct  27   LYRERVLFLCQDLDDELANQLIGIMLYLNAEEKSKDLYIYINSPGGSVTCGIAVYD  82


>gi|16209712|gb|AAL14412.1|  At1g12410/F5O11_7 [Arabidopsis thaliana]
Length=279

 Score = 57.0 bits (136),  Expect = 2e-08
 Identities = 24/56 (42%), Positives = 41/56 (73%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L RER++F+G NID+  ++ I++ +L LD  D ++ I +++N PGG L+ ++AIYD
Sbjct  94   LYRERVIFIGQNIDEEFSNQILATMLYLDTLDGSRRIYMYLNGPGGDLTPSLAIYD  149


>gi|2827888|gb|AAB99906.1|  ATP-dependent Clp protease proteolytic subunit [Arabidopsis thaliana]
Length=271

 Score = 57.0 bits (136),  Expect = 2e-08
 Identities = 26/57 (45%), Positives = 38/57 (66%), Gaps = 0/57 (0%)
 Frame = -2

Query  171  LLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            +L R RI+F+G  I+  VA  +ISQL+ L + D   DI +++NCPGGS  + + IYD
Sbjct  100  VLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLTIYD  156


>gi|116059291|emb|CAL54998.1|  ATP-dependent Clp protease, proteolytic subunit (ISS) [Ostreococcus 
tauri]
Length=604

 Score = 56.6 bits (135),  Expect = 3e-08
 Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            LL+ERIVF+   IDD  +   ++QLL L++  P   I +++N PGGS++A + IYD
Sbjct  433  LLKERIVFINGPIDDTASSLAVAQLLFLESASPTAPIWMYVNSPGGSVTAGLGIYD  488


>gi|116000447|emb|CAL50127.1|  FOG: Leucine rich repeat (ISS) [Ostreococcus tauri]
Length=742

 Score = 56.6 bits (135),  Expect = 3e-08
 Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            LL+ERIVF+   IDD  +   ++QLL L++  P   I +++N PGGS++A + IYD
Sbjct  566  LLKERIVFINGPIDDTASSLAVAQLLFLESASPTAPIWMYVNSPGGSVTAGLGIYD  621


>gi|115459516|ref|NP_001053358.1|  Os04g0525600 [Oryza sativa (japonica cultivar-group)]
 gi|113564929|dbj|BAF15272.1|  Os04g0525600 [Oryza sativa (japonica cultivar-group)]
Length=309

 Score = 56.6 bits (135),  Expect = 3e-08
 Identities = 26/56 (46%), Positives = 40/56 (71%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            LL+ERIV +   I D  A  +++QLL L++++P K + L+IN PGG ++A +AIYD
Sbjct  107  LLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYINSPGGVVTAGLAIYD  162


>gi|108773205|ref|YP_635771.1|  proteolytic subunit 2 of clp protease [Chara vulgaris]
 gi|77157861|gb|ABA61902.1|  proteolytic subunit 2 of clp protease [Chara vulgaris]
Length=219

 Score = 56.6 bits (135),  Expect = 3e-08
 Identities = 23/56 (41%), Positives = 42/56 (75%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L RER++FLG  +DD +A+ +I  ++ L+ +D +K++ ++IN PGGS+ A +A++D
Sbjct  27   LYRERLLFLGQRVDDEIANQLIGIMMYLNGEDDSKEMFMYINSPGGSVVAGIAVFD  82


>gi|38344435|emb|CAE05641.2|  OSJNBa0038O10.7 [Oryza sativa (japonica cultivar-group)]
 gi|116310954|emb|CAH67891.1|  OSIGBa0153E02-OSIGBa0093I20.20 [Oryza sativa (indica cultivar-group)]
Length=259

 Score = 56.6 bits (135),  Expect = 3e-08
 Identities = 26/56 (46%), Positives = 40/56 (71%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            LL+ERIV +   I D  A  +++QLL L++++P K + L+IN PGG ++A +AIYD
Sbjct  57   LLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYINSPGGVVTAGLAIYD  112


>gi|115447465|ref|NP_001047512.1|  Os02g0634500 [Oryza sativa (japonica cultivar-group)]
 gi|49388184|dbj|BAD25310.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113537043|dbj|BAF09426.1|  Os02g0634500 [Oryza sativa (japonica cultivar-group)]
Length=298

 Score = 56.6 bits (135),  Expect = 3e-08
 Identities = 26/56 (46%), Positives = 40/56 (71%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            LL+ERIV +   I D  A  +++QLL L++++P K + L+IN PGG ++A +AIYD
Sbjct  94   LLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVHLYINSPGGVVTAGLAIYD  149


>gi|18420643|ref|NP_568427.1|  CLPP2; endopeptidase Clp [Arabidopsis thaliana]
 gi|9759372|dbj|BAB09831.1|  ATP-dependent protease proteolytic subunit ClpP-like protein 
[Arabidopsis thaliana]
 gi|26452073|dbj|BAC43126.1|  putative ATP-dependent protease proteolytic subunit ClpP [Arabidopsis 
thaliana]
 gi|28950803|gb|AAO63325.1|  At5g23140 [Arabidopsis thaliana]
Length=241

 Score = 56.6 bits (135),  Expect = 3e-08
 Identities = 23/56 (41%), Positives = 42/56 (75%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            LL+ERI+ +   I+D  +  +++QLL L++++P+K I +++N PGG ++A +AIYD
Sbjct  53   LLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIYD  108


>gi|91214166|ref|YP_538790.1|  clp protease proteolytic subunit [Glycine max]
 gi|83595767|gb|ABC25148.1|  clp protease proteolytic subunit [Glycine max]
Length=196

 Score = 55.8 bits (133),  Expect = 4e-08
 Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L RER++FLG  +D  +++ +IS ++ L  ++ NKD+ LFIN PGG +   +AIYD
Sbjct  27   LYRERLLFLGQEVDSEISNQLISLMVYLSIEEENKDLYLFINSPGGWVIPGIAIYD  82


>gi|7524837|ref|NP_045839.1|  ATP-dependent Clp protease proteolytic subunit [Chlorella vulgaris]
 gi|3023501|sp|P56317|CLPP_CHLVU  ATP-dependent Clp protease proteolytic subunit (Endopeptidase 
Clp)
 gi|2224431|dbj|BAA57915.1|  ATP-dependent Clp protease proteolytic subunit [Chlorella vulgaris]
Length=201

 Score = 55.8 bits (133),  Expect = 4e-08
 Identities = 24/56 (42%), Positives = 41/56 (73%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L RER++FL   +DD +A+ +I  +L L+A++ NK + ++IN PGGS++  +A+YD
Sbjct  27   LYRERVLFLCQELDDELANQLIGIMLYLNAEEQNKGLYIYINSPGGSVTCGIAVYD  82


>gi|113170419|ref|YP_717211.1|  ClpP [Ostreococcus tauri]
 gi|112806826|emb|CAL36333.1|  ClpP [Ostreococcus tauri]
Length=200

 Score = 55.1 bits (131),  Expect = 7e-08
 Identities = 23/56 (41%), Positives = 42/56 (75%), Gaps = 0/56 (0%)
 Frame = -2

Query  168  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIRLFINCPGGSLSATMAIYD  1
            L RER++FLG+ +DD +A+ +   +L L A+D ++ + L+IN PGGS++A ++++D
Sbjct  27   LYRERVLFLGSGLDDELANQLNGIMLYLSAEDASRSLFLYINSPGGSVTAGLSVFD  82
Distribution of 100 Blast Hits on the Query Sequence
