Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168931388-21999-49157210571.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig166 Length=435
Score E Sequences producing significant alignments: (Bits) Value gi|92876895|gb|ABE84180.1| Glycine hydroxymethyltransferase [Med 279 3e-75 gi|462187|sp|P34899|GLYM_PEA Serine hydroxymethyltransferase,... 271 8e-73 gi|1707998|sp|P50433|GLYM_SOLTU Serine hydroxymethyltransfera... 270 1e-72 gi|1346156|sp|P49358|GLYN_FLAPR Serine hydroxymethyltransfera... 268 4e-72 gi|1346155|sp|P49357|GLYM_FLAPR Serine hydroxymethyltransfera... 267 1e-71 gi|30690394|ref|NP_851080.1| glycine hydroxymethyltransferase [A 266 2e-71 gi|14334888|gb|AAK59622.1| putative glycine hydroxymethyltran... 266 2e-71 gi|17017273|gb|AAL33594.1| serine hydroxymethyltransferase [Zea 264 8e-71 gi|15809972|gb|AAL06913.1| AT4g37930/F20D10_50 [Arabidopsis thal 262 4e-70 gi|15235745|ref|NP_195506.1| SHM1 (SERINE HYDROXYMETHYLTRANSF... 262 4e-70 gi|115455221|ref|NP_001051211.1| Os03g0738400 [Oryza sativa (... 258 5e-69 gi|108710978|gb|ABF98773.1| Serine hydroxymethyltransferase, ... 258 5e-69 gi|31126793|gb|AAP44712.1| putative glycine hydroxymethyltran... 258 5e-69 gi|72256527|gb|AAZ67146.1| serine hydroxymethyltransferase [Medi 258 7e-69 gi|30690400|ref|NP_851081.1| glycine hydroxymethyltransferase... 257 9e-69 gi|7433553|pir||T01759 glycine hydroxymethyltransferase (EC 2... 257 9e-69 gi|38000003|gb|AAR07090.1| putative glycine hydroxymethyltran... 221 1e-57 gi|116054949|emb|CAL57026.1| Glycine/serine hydroxymethyltran... 214 1e-55 gi|17066746|gb|AAL35384.1|AF442558_1 serine hydroxymethyltransfe 213 3e-55 gi|116056159|emb|CAL58340.1| Glycine/serine hydroxymethyltran... 176 3e-44 gi|14030719|gb|AAK53034.1|AF375450_1 AT4g32520/F8B4_220 [Arab... 176 3e-44 gi|4049354|emb|CAA22579.1| glycine hydroxymethyltransferase (... 176 3e-44 gi|18418028|ref|NP_567895.1| glycine hydroxymethyltransferase [A 176 3e-44 gi|62149091|dbj|BAD93605.1| hypothetical protein [Cucumis melo] 170 2e-42 gi|115485405|ref|NP_001067846.1| Os11g0455800 [Oryza sativa (... 166 2e-41 gi|77550705|gb|ABA93502.1| Serine hydroxymethyltransferase, m... 166 2e-41 gi|116056454|emb|CAL52743.1| Glycine/serine hydroxymethyltran... 166 4e-41 gi|115488306|ref|NP_001066640.1| Os12g0409000 [Oryza sativa (... 166 4e-41 gi|108862549|gb|ABA97575.2| Serine hydroxymethyltransferase, ... 166 4e-41 gi|21592544|gb|AAM64493.1| hydroxymethyltransferase [Arabidopsis 164 8e-41 gi|11762130|gb|AAG40343.1|AF324991_1 AT4g13930 [Arabidopsis thal 164 8e-41 gi|15236375|ref|NP_193129.1| SHM4 (SERINE HYDROXYMETHYLTRANSF... 164 8e-41 gi|115441361|ref|NP_001044960.1| Os01g0874900 [Oryza sativa (... 158 6e-39 gi|108862550|gb|ABG21992.1| Serine hydroxymethyltransferase, ... 157 2e-38 gi|15236371|ref|NP_193125.1| glycine hydroxymethyltransferase... 154 1e-37 gi|15219182|ref|NP_173621.1| glycine hydroxymethyltransferase... 154 1e-37 gi|115464031|ref|NP_001055615.1| Os05g0429000 [Oryza sativa (... 153 2e-37 gi|21537165|gb|AAM61506.1| putative hydroxymethyltransferase [Ar 148 8e-36 gi|12324475|gb|AAG52195.1|AC021199_1 putative hydroxymethyltr... 148 8e-36 gi|18400090|ref|NP_564473.1| glycine hydroxymethyltransferase... 148 8e-36 gi|117662358|gb|ABK55697.1| serine hydroxymethyltransferase [Cuc 127 1e-29 gi|113367198|gb|ABI34656.1| bZIP transcription factor bZIP94 [Gl 68.9 6e-12 gi|91940108|gb|ABE66394.1| hydroxymethyltransferase [Striga asia 55.1 9e-08 gi|90568429|gb|ABD94141.1| glycine hydroxymethyltransferase [... 54.7 1e-07 gi|54399314|gb|AAV34043.1| glycine hydroxymethyltransferase [... 53.5 3e-07 gi|115487956|ref|NP_001066465.1| Os12g0236700 [Oryza sativa (... 37.0 0.026 gi|30699000|ref|NP_177564.2| binding [Arabidopsis thaliana] >... 37.0 0.026 gi|12324905|gb|AAG52407.1|AC020579_9 putative mitochondrial c... 36.2 0.044 gi|3297847|emb|CAA07547.1| nonsymbiotic hemoglobin [Cichorium in 30.8 1.8 gi|21672054|gb|AAM74416.1|AC120497_16 Putative retroelement [Ory 29.6 4.1 gi|21536954|gb|AAM61295.1| GDSL-motif lipase/hydrolase-like prot 29.6 4.1 gi|20043057|gb|AAM08865.1|AC113339_11 Putative retroelement [Ory 29.6 4.1 gi|115461569|ref|NP_001054384.1| Os05g0102300 [Oryza sativa (... 29.6 4.1 gi|78708102|gb|ABB47077.1| retrotransposon protein, putative,... 29.6 4.1 gi|15237351|ref|NP_199408.1| carboxylic ester hydrolase/ hydr... 29.6 4.1 gi|92872712|gb|ABE81281.1| Leucine-rich repeat, cysteine-contain 29.3 5.4 gi|116056711|emb|CAL53000.1| FKBP-type peptidyl-prolyl cis-tr... 28.9 7.0 gi|8570065|dbj|BAA96770.1| putative verticillium wilt disease... 28.9 7.0 gi|115477182|ref|NP_001062187.1| Os08g0506100 [Oryza sativa (... 28.5 9.1
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 352 Number of extensions: 9 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 435 Length of database: 101054579 Length adjustment: 102 Effective length of query: 333 Effective length of database: 72152981 Effective search space: 3102578183 Effective search space used: 3102578183 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 62 (28.5 bits)