Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168937038-24743-109205234562.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig179 Length=193
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|21553614|gb|AAM62707.1| blue copper protein, putative [Arabid 68.2 9e-12 gi|18405269|ref|NP_566810.1| copper ion binding / electron tr... 66.6 2e-11 gi|9294213|dbj|BAB02115.1| unnamed protein product [Arabidopsis 60.8 1e-09 gi|87241159|gb|ABD33017.1| Cupredoxin [Medicago truncatula] 50.1 2e-06 gi|115472611|ref|NP_001059904.1| Os07g0542900 [Oryza sativa (... 49.3 4e-06 gi|115476950|ref|NP_001062071.1| Os08g0482700 [Oryza sativa (... 49.3 4e-06 gi|34395239|dbj|BAC83768.1| putative phytocyanin [Oryza sativa ( 49.3 4e-06 gi|110738186|dbj|BAF01024.1| uclacyanin I - like predicted GP... 47.8 1e-05 gi|15225223|ref|NP_180789.1| UCC1 (UCLACYANIN 1); copper ion ... 47.8 1e-05 gi|115485281|ref|NP_001067784.1| Os11g0428800 [Oryza sativa (... 47.8 1e-05 gi|115448797|ref|NP_001048178.1| Os02g0758800 [Oryza sativa (... 47.0 2e-05 gi|116310247|emb|CAH67255.1| OSIGBa0101C23.7 [Oryza sativa (indi 46.6 3e-05 gi|115459736|ref|NP_001053468.1| Os04g0545600 [Oryza sativa (... 46.6 3e-05 gi|70663965|emb|CAD41463.3| OSJNBa0079A21.7 [Oryza sativa (japon 46.6 3e-05 gi|38260606|gb|AAR15424.1| Cu2+ plastocyanin-like [Sisymbrium ir 46.2 3e-05 gi|38260658|gb|AAR15473.1| Cu2+ plastocyanin-like [Olimarabidops 46.2 3e-05 gi|115459734|ref|NP_001053467.1| Os04g0545400 [Oryza sativa (... 45.8 5e-05 gi|22326648|ref|NP_680152.1| copper ion binding / electron tr... 45.1 8e-05 gi|3747044|gb|AAC64163.1| blue copper protein [Zea mays] 45.1 8e-05 gi|38260640|gb|AAR15456.1| Cu2+ plastocyanin-like [Capsella rube 44.7 1e-04 gi|49387518|dbj|BAD24983.1| putative uclacyanin 3 [Oryza sativa 44.7 1e-04 gi|115479675|ref|NP_001063431.1| Os09g0469300 [Oryza sativa (... 44.7 1e-04 gi|38260673|gb|AAR15487.1| Cu2+ plastocyanin-like [Arabidopsis a 44.3 1e-04 gi|28269430|gb|AAO37973.1| putative blue copper-binding prote... 44.3 1e-04 gi|115480627|ref|NP_001063907.1| Os09g0557900 [Oryza sativa (... 44.3 1e-04 gi|29650480|gb|AAO86692.1| small blue copper protein Bcp1 [Boea 43.9 2e-04 gi|4104058|gb|AAD10251.1| blue copper-binding protein homolog [T 43.9 2e-04 gi|92873131|gb|ABE81629.1| Blue (type 1) copper domain [Medic... 43.5 2e-04 gi|22202776|dbj|BAC07432.1| putative blue copper protein prec... 43.5 2e-04 gi|15220846|ref|NP_173222.1| copper ion binding / electron tr... 43.1 3e-04 gi|115476948|ref|NP_001062070.1| Os08g0482600 [Oryza sativa (... 43.1 3e-04 gi|14140127|emb|CAC39044.1| uclacyanin 3-like protein [Oryza sat 43.1 3e-04 gi|38196011|gb|AAR13691.1| Cu2+ plastocyanin-like protein [Brass 42.7 4e-04 gi|92873134|gb|ABE81632.1| Blue (type 1) copper domain [Medic... 42.4 5e-04 gi|28269428|gb|AAO37971.1| putative blue copper-binding prote... 42.0 7e-04 gi|115467116|ref|NP_001057157.1| Os06g0218600 [Oryza sativa (... 41.6 9e-04 gi|9294157|dbj|BAB02059.1| blue copper-binding protein-like [Ara 40.4 0.002 gi|92893294|gb|ABE91701.1| Blue (type 1) copper domain [Medicago 40.0 0.002 gi|92876856|gb|ABE84147.1| Blue (type 1) copper domain [Medicago 40.0 0.002 gi|115470193|ref|NP_001058695.1| Os07g0105000 [Oryza sativa (... 40.0 0.002 gi|92873128|gb|ABE81626.1| Blue (type 1) copper domain [Medic... 39.7 0.003 gi|15224605|ref|NP_180663.1| copper ion binding / electron tr... 39.7 0.003 gi|115469554|ref|NP_001058376.1| Os06g0681200 [Oryza sativa (... 39.7 0.003 gi|1513180|gb|AAC32421.1| stellacyanin [Cucumis sativus] 39.3 0.004 gi|87162639|gb|ABD28434.1| Blue (type 1) copper domain [Medicago 38.5 0.007 gi|2493318|sp|Q41001|BCP_PEA Blue copper protein precursor >g... 38.5 0.007 gi|15232287|ref|NP_191586.1| copper ion binding / electron tr... 38.1 0.009 gi|62861393|gb|AAY16798.1| early salt stress and cold acclima... 37.7 0.012 gi|38636763|dbj|BAD03006.1| putative blue copper binding prot... 37.7 0.012 gi|15231795|ref|NP_190901.1| copper ion binding / electron tr... 37.7 0.012 gi|15232289|ref|NP_191587.1| UCC3 (UCLACYANIN 3); copper ion ... 37.7 0.012 gi|92892141|gb|ABE91159.1| Plastocyanin-like domain, putative [M 37.4 0.016 gi|115474725|ref|NP_001060959.1| Os08g0138400 [Oryza sativa (... 37.4 0.016 gi|10798754|dbj|BAB16429.1| NtEIG-A1 [Nicotiana tabacum] 37.4 0.016 gi|37651973|emb|CAE51320.1| blue copper binding protein [Hordeum 37.0 0.021 gi|115454885|ref|NP_001051043.1| Os03g0709100 [Oryza sativa (... 36.6 0.028 gi|87240629|gb|ABD32487.1| Blue (type 1) copper domain [Medicago 36.6 0.028 gi|62861389|gb|AAY16796.1| early salt stress and cold acclima... 36.6 0.028 gi|115448339|ref|NP_001047949.1| Os02g0720100 [Oryza sativa (... 36.6 0.028 gi|115487360|ref|NP_001066167.1| Os12g0150500 [Oryza sativa (... 36.2 0.036 gi|92897712|gb|ABE93827.1| Cupredoxin [Medicago truncatula] 36.2 0.036 gi|92876855|gb|ABE84146.1| Blue (type 1) copper domain [Medicago 36.2 0.036 gi|3860333|emb|CAA10134.1| basic blue copper protein [Cicer arie 36.2 0.036 gi|115456619|ref|NP_001051910.1| Os03g0850900 [Oryza sativa (... 36.2 0.036 gi|87240662|gb|ABD32520.1| Blue (type 1) copper domain [Medicago 36.2 0.036 gi|77553019|gb|ABA95815.1| Plastocyanin-like domain containin... 36.2 0.036 gi|62861391|gb|AAY16797.1| cold acclimation induced protein 2-1 36.2 0.036 gi|49389255|dbj|BAD25217.1| phytocyanin protein-like [Oryza s... 36.2 0.036 gi|38636761|dbj|BAD03004.1| putative blue copper binding prot... 36.2 0.036 gi|15226620|ref|NP_179179.1| copper ion binding / electron tr... 36.2 0.036 gi|115488472|ref|NP_001066723.1| Os12g0454600 [Oryza sativa (... 35.8 0.047 gi|3399769|gb|AAC32039.1| uclacyanin II [Arabidopsis thaliana] 35.8 0.047 gi|262105|gb|AAB24588.1| cupredoxin, CPC=type I copper protei... 35.8 0.047 gi|21554060|gb|AAM63141.1| phytocyanin [Arabidopsis thaliana] 35.8 0.047 gi|25453522|pir||T52410 blue copper-binding protein II [impor... 35.8 0.047 gi|1942283|pdb|1JER| Chain , Cucumber Stellacyanin, Cu2+, Ph 7 35.8 0.047 gi|115436004|ref|NP_001042760.1| Os01g0281600 [Oryza sativa (... 35.8 0.047 gi|25453521|pir||T52408 blue copper-binding protein II [impor... 35.8 0.047 gi|15224960|ref|NP_182006.1| UCC2 (UCLACYANIN 2); copper ion ... 35.8 0.047 gi|461825|sp|P29602|CPC_CUCSA Cucumber peeling cupredoxin (CPC) 35.8 0.047 gi|115474723|ref|NP_001060958.1| Os08g0138200 [Oryza sativa (... 35.4 0.061 gi|87240633|gb|ABD32491.1| Blue (type 1) copper domain [Medicago 35.4 0.061 gi|38636764|dbj|BAD03007.1| putative blue copper binding prot... 35.4 0.061 gi|15240310|ref|NP_198005.1| copper ion binding / electron tr... 35.4 0.061 gi|92873135|gb|ABE81633.1| Blue (type 1) copper domain [Medic... 35.0 0.080 gi|92873139|gb|ABE81637.1| Blue (type 1) copper domain [Medic... 35.0 0.080 gi|15225779|ref|NP_180240.1| copper ion binding / electron tr... 35.0 0.080 gi|7670832|gb|AAF66242.1|AF243180_1 dicyanin [Lycopersicon escul 35.0 0.080 gi|53791747|dbj|BAD53512.1| putative chemocyanin precursor [O... 35.0 0.080 gi|50252029|dbj|BAD27961.1| putative chemocyanin precursor [O... 35.0 0.080 gi|119720812|gb|ABL97976.1| lamin [Brassica rapa] 34.7 0.10 gi|115474721|ref|NP_001060957.1| Os08g0137800 [Oryza sativa (... 34.7 0.10 gi|14164559|gb|AAK55122.1|AF172853_1 putative S-RNase binding... 34.7 0.10 gi|9885806|gb|AAG01535.1|AF291179_1 stellacyanin-like protein CA 34.7 0.10 gi|8515096|gb|AAF75824.1|AF101788_1 phytocyanin homolog [Pinus t 34.7 0.10 gi|38636760|dbj|BAD03003.1| putative blue copper binding prot... 34.7 0.10 gi|2094888|pdb|2CBP| Chain , Cucumber Basic Protein, A Blue Co 34.7 0.10 gi|114806|sp|P00303|BABL_CUCSA Basic blue protein (Cusacyanin... 34.7 0.10 gi|15235520|ref|NP_193024.1| copper ion binding / electron tr... 34.3 0.14 gi|1262752|emb|CAA65844.1| lamin [Arabidopsis thaliana] 34.3 0.14
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 144 Number of extensions: 0 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 193 Length of database: 101054579 Length adjustment: 36 Effective length of query: 157 Effective length of database: 90854015 Effective search space: 2543912420 Effective search space used: 2543912420 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)
