Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168937110-29960-13000485826.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig180 Length=658
Score E Sequences producing significant alignments: (Bits) Value gi|18411783|ref|NP_565167.1| unknown protein [Arabidopsis tha... 139 9e-33 gi|21593931|gb|AAM65894.1| unknown [Arabidopsis thaliana] 139 1e-32 gi|18395081|ref|NP_564160.1| unknown protein [Arabidopsis tha... 126 6e-29 gi|9280684|gb|AAF86553.1|AC069252_12 F2E2.23 [Arabidopsis thalia 96.3 9e-20 gi|62867601|gb|AAY17404.1| At4g39795 [Arabidopsis thaliana] >... 91.3 3e-18 gi|30692533|ref|NP_680776.2| unknown protein [Arabidopsis thalia 91.3 3e-18 gi|115476360|ref|NP_001061776.1| Os08g0407600 [Oryza sativa (... 89.7 8e-18 gi|49387664|dbj|BAD25910.1| unknown protein [Oryza sativa (ja... 86.3 9e-17 gi|115467170|ref|NP_001057184.1| Os06g0223700 [Oryza sativa (... 82.8 1e-15 gi|15238322|ref|NP_201309.1| unknown protein [Arabidopsis tha... 71.6 2e-12 gi|15238001|ref|NP_199517.1| unknown protein [Arabidopsis tha... 68.9 2e-11 gi|21594214|gb|AAM65981.1| unknown [Arabidopsis thaliana] 68.6 2e-11 gi|18414940|ref|NP_567534.1| unknown protein [Arabidopsis tha... 68.6 2e-11 gi|71834744|gb|AAZ41834.1| 80C09_23 [Brassica rapa subsp. pekine 67.4 4e-11 gi|2245125|emb|CAB10547.1| hypothetical protein [Arabidopsis ... 67.0 6e-11 gi|115476698|ref|NP_001061945.1| Os08g0451200 [Oryza sativa (... 65.9 1e-10 gi|89257662|gb|ABD65149.1| hypothetical protein 40.t00027 [Brass 65.9 1e-10 gi|115447987|ref|NP_001047773.1| Os02g0686700 [Oryza sativa (... 65.9 1e-10 gi|15239795|ref|NP_199723.1| unknown protein [Arabidopsis tha... 65.9 1e-10 gi|18406598|ref|NP_566023.1| unknown protein [Arabidopsis tha... 65.5 2e-10 gi|116309823|emb|CAH66860.1| H0307D04.5 [Oryza sativa (indica cu 64.3 4e-10 gi|115460160|ref|NP_001053680.1| Os04g0585700 [Oryza sativa (... 64.3 4e-10 gi|115479307|ref|NP_001063247.1| Os09g0433800 [Oryza sativa (... 63.9 5e-10 gi|115448711|ref|NP_001048135.1| Os02g0751300 [Oryza sativa (... 62.0 2e-09 gi|115469958|ref|NP_001058578.1| Os06g0714800 [Oryza sativa (... 61.6 2e-09 gi|53791774|dbj|BAD53568.1| unknown protein [Oryza sativa (japon 61.6 2e-09 gi|116309824|emb|CAH66861.1| H0307D04.6 [Oryza sativa (indica cu 61.2 3e-09 gi|38344282|emb|CAE03765.2| OSJNBa0013K16.14 [Oryza sativa (japo 61.2 3e-09 gi|115447035|ref|NP_001047297.1| Os02g0592800 [Oryza sativa (... 61.2 3e-09 gi|41052726|dbj|BAD07583.1| hypothetical protein [Oryza sativa ( 61.2 3e-09 gi|92891802|gb|ABE90961.1| Protein of unknown function DUF581 [M 60.1 7e-09 gi|18404687|ref|NP_564644.1| unknown protein [Arabidopsis tha... 59.3 1e-08 gi|115460164|ref|NP_001053682.1| Os04g0586000 [Oryza sativa (... 58.9 2e-08 gi|21553867|gb|AAM62960.1| unknown [Arabidopsis thaliana] 58.2 3e-08 gi|77552390|gb|ABA95187.1| hypothetical protein LOC_Os11g4379... 57.4 5e-08 gi|115454481|ref|NP_001050841.1| Os03g0665200 [Oryza sativa (... 56.2 1e-07 gi|115447991|ref|NP_001047775.1| Os02g0687200 [Oryza sativa (... 56.2 1e-07 gi|115447989|ref|NP_001047774.1| Os02g0686800 [Oryza sativa (... 55.5 2e-07 gi|15242041|ref|NP_197570.1| unknown protein [Arabidopsis tha... 55.5 2e-07 gi|8954058|gb|AAF82231.1|AC069143_7 Contains similarity to a ... 55.1 2e-07 gi|15221976|ref|NP_173354.1| unknown protein [Arabidopsis thalia 55.1 2e-07 gi|21592506|gb|AAM64456.1| unknown [Arabidopsis thaliana] 54.7 3e-07 gi|5882729|gb|AAD55282.1|AC008263_13 ESTs gb|T04387, gb|R8402... 54.7 3e-07 gi|18410735|ref|NP_565095.1| unknown protein [Arabidopsis tha... 54.7 3e-07 gi|115460166|ref|NP_001053683.1| Os04g0586100 [Oryza sativa (... 54.3 4e-07 gi|115466098|ref|NP_001056648.1| Os06g0125200 [Oryza sativa (... 53.9 5e-07 gi|55295863|dbj|BAD67731.1| unknown protein [Oryza sativa (japon 53.9 5e-07 gi|116309831|emb|CAH66868.1| H0307D04.13 [Oryza sativa (indica c 53.5 7e-07 gi|115460168|ref|NP_001053684.1| Os04g0586200 [Oryza sativa (... 53.5 7e-07 gi|115451161|ref|NP_001049181.1| Os03g0183500 [Oryza sativa (... 53.5 7e-07 gi|115444541|ref|NP_001046050.1| Os02g0174800 [Oryza sativa (... 52.0 2e-06 gi|33772238|gb|AAQ54554.1| putative senescence-associated pro... 51.6 3e-06 gi|22331260|ref|NP_188894.2| unknown protein [Arabidopsis tha... 51.6 3e-06 gi|11994287|dbj|BAB01470.1| unnamed protein product [Arabidopsis 51.6 3e-06 gi|49659790|gb|AAT68207.1| unknown [Cynodon dactylon] 51.2 3e-06 gi|115434898|ref|NP_001042207.1| Os01g0180400 [Oryza sativa (... 50.1 7e-06 gi|15239054|ref|NP_196707.1| unknown protein [Arabidopsis tha... 50.1 7e-06 gi|55296303|dbj|BAD68083.1| unknown protein [Oryza sativa (japon 50.1 7e-06 gi|115482076|ref|NP_001064631.1| Os10g0422600 [Oryza sativa (... 49.7 1e-05 gi|21593555|gb|AAM65522.1| unknown [Arabidopsis thaliana] 49.7 1e-05 gi|78708662|gb|ABB47637.1| expressed protein [Oryza sativa (japo 49.7 1e-05 gi|115439601|ref|NP_001044080.1| Os01g0719000 [Oryza sativa (... 49.3 1e-05 gi|92875758|gb|ABE83632.1| Protein of unknown function DUF581 [M 49.3 1e-05 gi|57899890|dbj|BAD87760.1| unknown protein [Oryza sativa (japon 49.3 1e-05 gi|115460162|ref|NP_001053681.1| Os04g0585900 [Oryza sativa (... 48.9 2e-05 gi|18412661|ref|NP_567143.1| MARD1 (MEDIATOR OF ABA-REGULATED... 48.9 2e-05 gi|7523403|emb|CAB86422.1| putative protein [Arabidopsis thalian 48.9 2e-05 gi|22331931|gb|AAK92226.1| senescence-associated protein SAG102 48.9 2e-05 gi|115438108|ref|NP_001043459.1| Os01g0593200 [Oryza sativa (... 48.9 2e-05 gi|92883932|gb|ABE87128.1| Protein of unknown function DUF581 [M 47.4 5e-05 gi|89257542|gb|ABD65032.1| hypothetical protein 26.t00087 [Brass 46.2 1e-04 gi|15225171|ref|NP_180140.1| unknown protein [Arabidopsis tha... 46.2 1e-04 gi|67633714|gb|AAY78781.1| senescence-associated protein-related 40.4 0.006 gi|57900684|gb|AAW57809.1| unknown protein [Oryza sativa (japoni 39.7 0.010 gi|52076973|dbj|BAD45983.1| hypothetical protein [Oryza sativa ( 38.1 0.029 gi|115473343|ref|NP_001060270.1| Os07g0615500 [Oryza sativa (... 36.6 0.083 gi|55296636|dbj|BAD69338.1| hypothetical protein [Oryza sativa ( 33.9 0.54 gi|115438600|ref|NP_001043580.1| Os01g0616800 [Oryza sativa (... 32.0 2.1 gi|4322486|gb|AAD16060.1| root gravitropism control protein [Ara 31.6 2.7 gi|8843811|dbj|BAA97359.1| auxin transport protein EIR1 [Arabido 31.6 2.7 gi|18423936|ref|NP_568848.1| EIR1 (ETHYLENE INSENSITIVE ROOT ... 31.6 2.7 gi|40538919|gb|AAR87176.1| expressed protein, 3'-partial [Ory... 30.4 6.0 gi|62734258|gb|AAX96367.1| transposon protein, putative, CACT... 30.4 6.0 gi|50838998|gb|AAT81759.1| hypothetical protein [Oryza sativa... 30.0 7.8 gi|77555601|gb|ABA98397.1| transposon protein, putative, CACT... 30.0 7.8 gi|37806347|dbj|BAC99860.1| hypothetical protein [Oryza sativa ( 30.0 7.8
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 356 Number of extensions: 1 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 658 Length of database: 101054579 Length adjustment: 109 Effective length of query: 549 Effective length of database: 70169538 Effective search space: 7718649180 Effective search space used: 7718649180 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 65 (29.6 bits)