Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168937133-32602-8456800915.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig181 Length=351
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|15224204|ref|NP_181830.1| amine oxidase/ oxidoreductase [A... 196 2e-50 gi|15231622|ref|NP_191464.1| oxidoreductase [Arabidopsis thal... 196 3e-50 gi|21553762|gb|AAM62855.1| putative amine oxidase [Arabidopsis t 195 4e-50 gi|18650598|gb|AAL75899.1| At2g43020/MFL8.12 [Arabidopsis thalia 193 1e-49 gi|102139789|gb|ABF69974.1| amine oxidase family protein [Musa a 192 2e-49 gi|116309749|emb|CAH66792.1| H0215F08.3 [Oryza sativa (indica cu 182 4e-46 gi|115460646|ref|NP_001053923.1| Os04g0623300 [Oryza sativa (... 182 4e-46 gi|15218830|ref|NP_176759.1| amine oxidase/ oxidoreductase [A... 167 8e-42 gi|13877615|gb|AAK43885.1|AF370508_1 putative protein kinase gb| 166 2e-41 gi|6686400|gb|AAF23834.1|AC007234_6 F1E22.18 [Arabidopsis thalia 161 6e-40 gi|92897720|gb|ABE93835.1| AAA ATPase [Medicago truncatula] 158 5e-39 gi|115461238|ref|NP_001054219.1| Os04g0671300 [Oryza sativa (... 151 8e-37 gi|70663937|emb|CAE03599.2| OSJNBb0004A17.1 [Oryza sativa (japon 151 8e-37 gi|115461236|ref|NP_001054218.1| Os04g0671200 [Oryza sativa (... 150 1e-36 gi|115483106|ref|NP_001065146.1| Os10g0532100 [Oryza sativa (... 82.8 3e-16 gi|110289472|gb|ABB47924.2| amine oxidase, flavin-containing ... 82.8 3e-16 gi|22002131|gb|AAM88615.1| putative polyamine oxidase [Oryza ... 82.8 3e-16 gi|22213173|gb|AAM94513.1| putative polyamine oxidase, 3'-par... 82.8 3e-16 gi|9368354|emb|CAB98166.1| putative corticosteroid binding prote 77.4 1e-14 gi|15234887|ref|NP_193364.1| amine oxidase/ oxidoreductase [A... 75.1 7e-14 gi|21217451|gb|AAM43922.1|AF469064_1 polyamine oxidase [Amaranth 55.5 6e-08 gi|15231329|ref|NP_187981.1| amine oxidase/ oxidoreductase [A... 54.7 1e-07 gi|116056721|emb|CAL53010.1| Nuclear architecture related protei 53.9 2e-07 gi|115474759|ref|NP_001060976.1| Os08g0143400 [Oryza sativa (... 53.9 2e-07 gi|45736152|dbj|BAD13198.1| putative polyamine oxidase isofor... 53.9 2e-07 gi|115448763|ref|NP_001048161.1| Os02g0755200 [Oryza sativa (... 52.4 5e-07 gi|9844871|emb|CAC04002.1| polyamine oxidase [Zea mays] 51.2 1e-06 gi|6730082|pdb|1B37|A Chain A, A 30 Angstrom U-Shaped Catalyt... 51.2 1e-06 gi|6225822|sp|O64411|PAO_MAIZE Polyamine oxidase precursor >g... 51.2 1e-06 gi|116056332|emb|CAL56715.1| Amine oxidase (ISS) [Ostreococcus t 49.7 3e-06 gi|71043507|dbj|BAE16174.1| polyamine oxidase [Nicotiana tabacum 48.9 5e-06 gi|39104594|dbj|BAC43225.2| putative polyamine oxidase [Arabidop 48.5 7e-06 gi|15240690|ref|NP_196874.1| oxidoreductase [Arabidopsis thal... 48.5 7e-06 gi|62321362|dbj|BAD94669.1| flavin-containing amine oxidase [Ara 47.4 2e-05 gi|15221606|ref|NP_176471.1| amine oxidase/ oxidoreductase [A... 47.4 2e-05 gi|6630454|gb|AAF19542.1|AC007190_10 F23N19.18 [Arabidopsis thal 47.4 2e-05 gi|112293230|dbj|BAF02915.1| polyamine oxidase [Malus x domestic 47.0 2e-05 gi|112293232|dbj|BAF02916.1| polyamine oxidase [Malus x domestic 47.0 2e-05 gi|14485487|emb|CAC42081.1| polyamine oxidase [Hordeum vulgar... 46.2 3e-05 gi|116058576|emb|CAL54283.1| Amine oxidase (ISS) [Ostreococcus t 44.7 1e-04 gi|115478833|ref|NP_001063010.1| Os09g0368200 [Oryza sativa (... 42.7 4e-04 gi|115478835|ref|NP_001063011.1| Os09g0368500 [Oryza sativa (... 42.7 4e-04 gi|49387668|dbj|BAD25914.1| putative polyamine oxidase precur... 42.7 4e-04 gi|49387670|dbj|BAD25916.1| putative polyamine oxidase precur... 42.7 4e-04 gi|61661322|gb|AAX51267.1| flowering locus D [Arabidopsis thalia 41.6 9e-04 gi|14485485|emb|CAC42080.1| polyamine oxidase [Hordeum vulgar... 41.6 9e-04 gi|15228277|ref|NP_187650.1| FLD (FLOWERING LOCUS D); amine o... 41.6 9e-04 gi|116311130|emb|CAH68056.1| B0103C08-B0602B01.13 [Oryza sativa 41.2 0.001 gi|115459890|ref|NP_001053545.1| Os04g0560300 [Oryza sativa (... 41.2 0.001 gi|61611724|gb|AAX47181.1| FLOWERING LOCUS D [Pisum sativum] 39.3 0.004 gi|116056999|emb|CAL51426.1| Amine oxidase (ISS) [Ostreococcus t 37.0 0.021 gi|27543472|gb|AAO16558.1| putative polyamine oxidase [Brassica 36.6 0.028 gi|6056188|gb|AAF02805.1|AC009400_1 hypothetical protein, 3' par 33.9 0.18 gi|15233671|ref|NP_194701.1| amine oxidase/ oxidoreductase [A... 33.9 0.18 gi|115451293|ref|NP_001049247.1| Os03g0193400 [Oryza sativa (... 33.5 0.23 gi|24414277|gb|AAN59780.1| Putative polyamine oxidase precurs... 33.5 0.23 gi|17425194|dbj|BAB78752.1| low-molecular-weight glutenin sub... 32.0 0.68 gi|92871120|gb|ABE80231.1| F28L22.6 protein - Arabidopsis thalia 30.4 2.0 gi|115439517|ref|NP_001044038.1| Os01g0710200 [Oryza sativa (... 30.0 2.6 gi|17425196|dbj|BAB78753.1| low-molecular-weight glutenin sub... 30.0 2.6 gi|62421774|gb|AAX82552.1| 120 kDa pistil extensin-like protein 29.6 3.4 gi|13877639|gb|AAK43897.1|AF370520_1 putative helicase [Arabidop 29.3 4.4 gi|6513947|gb|AAF14851.1|AC011664_33 putative helicase [Arabidop 29.3 4.4 gi|115453927|ref|NP_001050564.1| Os03g0583900 [Oryza sativa (... 29.3 4.4 gi|50399920|gb|AAT76308.1| putative RNA helicase/RNAseIII pro... 29.3 4.4 gi|9716372|gb|AAF97501.1|AF199021_1 CALK protein [Chlamydomonas 29.3 4.4 gi|25084218|gb|AAN72199.1| putative helicase [Arabidopsis thalia 29.3 4.4 gi|18396054|ref|NP_566160.1| ATP binding / ATP-dependent heli... 29.3 4.4 gi|50726394|dbj|BAD34005.1| CAF protein-like [Oryza sativa (j... 29.3 4.4 gi|19881585|gb|AAM00986.1|AC090482_15 Hypothetical protein [Oryz 28.5 7.5 gi|2653671|gb|AAC15893.1| 120 kDa style glycoprotein [Nicotiana 28.5 7.5 gi|62421776|gb|AAX82553.1| 120 kDa pistil extensin-like protein 28.5 7.5 gi|62421767|gb|AAX82549.1| 120 kDa pistil extensin-like prote... 28.5 7.5 gi|62421769|gb|AAX82550.1| 120 kDa pistil extensin-like protein 28.5 7.5 gi|62421778|gb|AAX82554.1| 120 kDa pistil extensin-like protein 28.5 7.5 gi|62421780|gb|AAX82555.1| 120 kDa pistil extensin-like protein 28.5 7.5 gi|92870478|gb|ABE79773.1| hypothetical protein MtrDRAFT_AC14... 28.1 9.8 gi|5263326|gb|AAD41428.1|AC007727_17 Similar to gb|U06698 neu... 28.1 9.8 gi|30687506|ref|NP_173592.3| ATP binding / microtubule motor ... 28.1 9.8 gi|10177694|dbj|BAB11020.1| unnamed protein product [Arabidopsis 28.1 9.8
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 251 Number of extensions: 5 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 351 Length of database: 101054579 Length adjustment: 84 Effective length of query: 267 Effective length of database: 77253263 Effective search space: 2549357679 Effective search space used: 2549357679 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)