RID=1168937307-676-162206278792.BLASTQ4, Contig189

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168937307-676-162206278792.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig189
Length=614

Distribution of 14 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|92888426|gb|ABE89402.1|  HYS1-related [Medicago truncatula]     71.6    2e-13
gi|57899833|dbj|BAD87617.1|  putative HYS1 [Oryza sativa (japo...  68.9    8e-12
gi|115441857|ref|NP_001045208.1|  Os01g0918500 [Oryza sativa (...  68.9    8e-12 
gi|110737977|dbj|BAF00924.1|  HYS1 [Arabidopsis thaliana]          55.1    2e-07
gi|17939936|dbj|BAB79495.1|  HYS1 [Arabidopsis thaliana]           55.1    2e-07 
gi|18424892|ref|NP_569003.1|  CPR5 (CONSTITUTIVE EXPRESSION OF...  55.1    2e-07 
gi|92891902|gb|ABE91004.1|  Zinc finger C-x8-C-x5-C-x3-H type ...  50.8    4e-06
gi|115448937|ref|NP_001048248.1|  Os02g0770100 [Oryza sativa (...  38.5    0.019 
gi|46805415|dbj|BAD16917.1|  putative HYS1 [Oryza sativa (japonic  38.5    0.019 
gi|110739549|dbj|BAF01683.1|  hypothetical protein [Arabidopsis t  31.2    3.1  
gi|115481932|ref|NP_001064559.1|  Os10g0405500 [Oryza sativa (...  30.4    5.2

Alignments

 

>gi|92888426|gb|ABE89402.1|  HYS1-related [Medicago truncatula]
Length=549

 Score = 71.6 bits (174),  Expect(2) = 2e-13
 Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 0/73 (0%)
 Frame = -1

Query  572  HFLSNVFTPVLFIILHGPFNVSQAMRQRPLLPYWIRRSLFYSiillilpllxgLMPFARL  393
            HFLS  +T  L+ ILHGP    Q  +  P++ +WIRR LFY+I+L++LPL  GL+PFA L
Sbjct  460  HFLSICWTSALYAILHGPITTLQTKKGDPIVQHWIRRFLFYAILLVVLPLCCGLLPFASL  519

Query  392  SEWKDHFMVLVLD  354
             +WKDHFM  V D
Sbjct  520  GQWKDHFMSKVFD  532


 Score = 23.5 bits (49),  Expect(2) = 2e-13
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -2

Query  610  YYWLVYWEI  584
            Y WL+YWEI
Sbjct  447  YIWLLYWEI  455


>gi|57899833|dbj|BAD87617.1|  putative HYS1 [Oryza sativa (japonica cultivar-group)]
 gi|57900452|dbj|BAD87745.1|  putative HYS1 [Oryza sativa (japonica cultivar-group)]
Length=516

 Score = 68.9 bits (167),  Expect(2) = 8e-12
 Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
 Frame = -1

Query  572  HFLSNVFTPVLFIILHGPFNVSQAMRQRPLLPYWIRRSLFYSiillilpllxgLMPFARL  393
            H L N+F  +L+ +LHGP +VS    Q   LPYW+RR LFY+ + LILP L GL+PFA L
Sbjct  436  HLLGNLFPSLLYHVLHGPISVSHR-EQVVWLPYWVRRCLFYAAVGLILPALTGLLPFASL  494

Query  392  SEWKDHFM  369
            S+WKDHF+
Sbjct  495  SDWKDHFV  502


 Score = 20.8 bits (42),  Expect(2) = 8e-12
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -2

Query  604  WLVYWEI  584
            WL+YWE+
Sbjct  425  WLMYWEV  431


>gi|115441857|ref|NP_001045208.1|  Os01g0918500 [Oryza sativa (japonica cultivar-group)]
 gi|113534739|dbj|BAF07122.1|  Os01g0918500 [Oryza sativa (japonica cultivar-group)]
Length=394

 Score = 68.9 bits (167),  Expect(2) = 8e-12
 Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
 Frame = -1

Query  572  HFLSNVFTPVLFIILHGPFNVSQAMRQRPLLPYWIRRSLFYSiillilpllxgLMPFARL  393
            H L N+F  +L+ +LHGP +VS    Q   LPYW+RR LFY+ + LILP L GL+PFA L
Sbjct  314  HLLGNLFPSLLYHVLHGPISVSHR-EQVVWLPYWVRRCLFYAAVGLILPALTGLLPFASL  372

Query  392  SEWKDHFM  369
            S+WKDHF+
Sbjct  373  SDWKDHFV  380


 Score = 20.8 bits (42),  Expect(2) = 8e-12
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -2

Query  604  WLVYWEI  584
            WL+YWE+
Sbjct  303  WLMYWEV  309


>gi|110737977|dbj|BAF00924.1|  HYS1 [Arabidopsis thaliana]
Length=555

 Score = 55.1 bits (131),  Expect = 2e-07
 Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
 Frame = -1

Query  569  FLSNVFTPVLFIILHGPFNVSQAMRQR---PLLPYWIRRSLFYSiillilpllxgLMPFA  399
            F++NVFT  L+ ++ GP NV+Q  R      + PYW RRS+ Y +IL +LP++ GL+PFA
Sbjct  476  FVANVFTLALYGLMFGPINVTQETRSNRCNSMFPYWARRSVVYVVILFVLPVINGLLPFA  535

Query  398  RLSEWKDHFM  369
               EW+D  M
Sbjct  536  TFGEWRDFAM  545


>gi|17939936|dbj|BAB79495.1|  HYS1 [Arabidopsis thaliana]
Length=528

 Score = 55.1 bits (131),  Expect = 2e-07
 Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
 Frame = -1

Query  569  FLSNVFTPVLFIILHGPFNVSQAMRQR---PLLPYWIRRSLFYSiillilpllxgLMPFA  399
            F++NVFT  L+ ++ GP NV+Q  R      + PYW RRS+ Y +IL +LP++ GL+PFA
Sbjct  449  FVANVFTLALYGLMFGPINVTQETRSNRCNSMFPYWARRSVVYVVILFVLPVINGLLPFA  508

Query  398  RLSEWKDHFM  369
               EW+D  M
Sbjct  509  TFGEWRDFAM  518


>gi|18424892|ref|NP_569003.1|  CPR5 (CONSTITUTIVE EXPRESSION OF PR GENES 5) [Arabidopsis thaliana]
 gi|75180608|sp|Q9LV85|CPR5_ARATH  Protein CPR-5 (Protein constitutive expression of pathogenesis-related 
genes 5) (Protein constitutive expression of PR genes 
5) (Protein hypersenescence-1)
 gi|8843757|dbj|BAA97305.1|  unnamed protein product [Arabidopsis thaliana]
 gi|14245679|gb|AAK56393.1|  CPR5 [Arabidopsis thaliana]
Length=564

 Score = 55.1 bits (131),  Expect = 2e-07
 Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
 Frame = -1

Query  569  FLSNVFTPVLFIILHGPFNVSQAMRQR---PLLPYWIRRSLFYSiillilpllxgLMPFA  399
            F++NVFT  L+ ++ GP NV+Q  R      + PYW RRS+ Y +IL +LP++ GL+PFA
Sbjct  485  FVANVFTLALYGLMFGPINVTQETRSNRCNSMFPYWARRSVVYVVILFVLPVINGLLPFA  544

Query  398  RLSEWKDHFM  369
               EW+D  M
Sbjct  545  TFGEWRDFAM  554


>gi|92891902|gb|ABE91004.1|  Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative [Medicago 
truncatula]
Length=387

 Score = 50.8 bits (120),  Expect = 4e-06
 Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 0/55 (0%)
 Frame = -1

Query  533  ILHGPFNVSQAMRQRPLLPYWIRRSLFYSiillilpllxgLMPFARLSEWKDHFM  369
            +LHG   VSQ   +  +LPYW RR  FY+ +L+ LPL+ GL PFA LS+W +HF+
Sbjct  1    MLHGSVIVSQKSNRHIILPYWFRRLWFYATLLVFLPLIGGLAPFAALSQWNNHFL  55


>gi|115448937|ref|NP_001048248.1|  Os02g0770100 [Oryza sativa (japonica cultivar-group)]
 gi|113537779|dbj|BAF10162.1|  Os02g0770100 [Oryza sativa (japonica cultivar-group)]
Length=544

 Score = 38.5 bits (88),  Expect = 0.019
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = -1

Query  572  HFLSNVFTPVLFIILHGPFNVSQAMRQRPLLPYWIRRSLFYSiillilpllxgLMPFARL  393
            H   N    +L+ +L+GP +V+   +   L PY + R  FY+++ +ILP L GL+PFA L
Sbjct  464  HLFGNSRPSLLYRMLYGPISVTDRTKASDL-PYRVCRYTFYTVLSVILPCLAGLLPFASL  522

Query  392  SEWKD  378
            S+W +
Sbjct  523  SDWNE  527


>gi|46805415|dbj|BAD16917.1|  putative HYS1 [Oryza sativa (japonica cultivar-group)]
Length=545

 Score = 38.5 bits (88),  Expect = 0.019
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = -1

Query  572  HFLSNVFTPVLFIILHGPFNVSQAMRQRPLLPYWIRRSLFYSiillilpllxgLMPFARL  393
            H   N    +L+ +L+GP +V+   +   L PY + R  FY+++ +ILP L GL+PFA L
Sbjct  465  HLFGNSRPSLLYRMLYGPISVTDRTKASDL-PYRVCRYTFYTVLSVILPCLAGLLPFASL  523

Query  392  SEWKD  378
            S+W +
Sbjct  524  SDWNE  528


>gi|110739549|dbj|BAF01683.1|  hypothetical protein [Arabidopsis thaliana]
Length=37

 Score = 31.2 bits (69),  Expect = 3.1
 Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -3

Query  309  VRLSLVHWGLVYVKVPICCQANNVV-GLVGVI  217
            +RLSL  W L+  +V ICC+A+ V+ G +G +
Sbjct  1    MRLSLCQWNLIIPEVYICCEASLVLEGRIGAV  32


>gi|115481932|ref|NP_001064559.1|  Os10g0405500 [Oryza sativa (japonica cultivar-group)]
 gi|15451547|gb|AAK98671.1|AC021893_5  Hypothetical protein [Oryza sativa]
 gi|31431985|gb|AAP53684.1|  expressed protein [Oryza sativa (japonica cultivar-group)]
 gi|113639168|dbj|BAF26473.1|  Os10g0405500 [Oryza sativa (japonica cultivar-group)]
Length=814

 Score = 30.4 bits (67),  Expect = 5.2
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 0/63 (0%)
 Frame = +3

Query  210  TDKLPQPIPQHYLPDNKLAL*HILGPSGPRITSQAATSAHQTLASTISI*NQHHEMIFPL  389
            +DK P+ +P++YL      L  +LG    +I S+    + + LA+T  I  QH E +   
Sbjct  633  SDKEPEKVPENYLTRAFDQLVVVLGRFQTKIKSETRNKSSKILAATGEIIRQHLEGVEGQ  692

Query  390  AQA  398
             QA
Sbjct  693  MQA  695

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 418
Number of extensions: 2
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 614
Length of database: 101054579
Length adjustment: 108
Effective length of query: 506
Effective length of database: 70452887
Effective search space: 6763477152
Effective search space used: 6763477152
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 65 (29.6 bits)