RID=1168937417-10196-78917531048.BLASTQ1, Contig192

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168937417-10196-78917531048.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig192
Length=645

Distribution of 17 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|1335862|gb|AAC49294.1|  clathrin heavy chain                    49.7    9e-06 
gi|92892796|gb|ABE91395.1|  Clathrin propeller, N-terminal; Pr...  49.3    1e-05
gi|62321465|dbj|BAD94884.1|  hypothetical protein [Arabidopsis th  45.4    2e-04 
gi|20453062|gb|AAM19776.1|  AT3g08530/T8G24_1 [Arabidopsis tha...  45.4    2e-04 
gi|12321552|gb|AAG50828.1|AC074395_2  clathrin heavy chain, putat  45.4    2e-04
gi|42563757|ref|NP_187466.4|  structural molecule [Arabidopsis...  45.4    2e-04 
gi|115486882|ref|NP_001065928.1|  Os12g0104800 [Oryza sativa (...  44.7    3e-04 
gi|115483737|ref|NP_001065530.1|  Os11g0104900 [Oryza sativa (...  44.7    3e-04 
gi|110739736|dbj|BAF01775.1|  hypothetical protein [Arabidopsis t  44.7    3e-04
gi|92898022|gb|ABE94026.1|  Clathrin propeller, N-terminal; Pr...  44.7    3e-04
gi|6016683|gb|AAF01510.1|AC009991_6  putative clathrin heavy c...  44.7    3e-04
gi|77552802|gb|ABA95598.1|  Clathrin heavy chain, putative, ex...  44.7    3e-04
gi|77548264|gb|ABA91061.1|  Clathrin heavy chain, putative, ex...  44.7    3e-04
gi|30681617|ref|NP_187724.2|  structural molecule [Arabidopsis...  44.7    3e-04 
gi|116059036|emb|CAL54743.1|  unnamed protein product [Ostreococc  32.3    1.5  
gi|15219699|ref|NP_174809.1|  ATP binding / protein kinase/ pr...  30.8    4.4   
gi|4586878|dbj|BAA76516.1|  HR7 [Hyoscyamus niger]                 30.0    7.5

Alignments

 

>gi|1335862|gb|AAC49294.1|  clathrin heavy chain
Length=1700

 Score = 49.7 bits (117),  Expect = 9e-06
 Identities = 31/36 (86%), Positives = 35/36 (97%), Gaps = 0/36 (0%)
 Frame = +1

Query  1     GKVDELVKDKIEAMNQLkakeeeekDVVAQQNMYAQ  108
             GKVDELVKDKIEA NQ+KAKE+EEK+V+AQQNMYAQ
Sbjct  1622  GKVDELVKDKIEAQNQVKAKEQEEKEVIAQQNMYAQ  1657


>gi|92892796|gb|ABE91395.1|  Clathrin propeller, N-terminal; Protein prenyltransferase [Medicago 
truncatula]
Length=1706

 Score = 49.3 bits (116),  Expect = 1e-05
 Identities = 30/36 (83%), Positives = 35/36 (97%), Gaps = 0/36 (0%)
 Frame = +1

Query  1     GKVDELVKDKIEAMNQLkakeeeekDVVAQQNMYAQ  108
             GKVDELVKD+IEA N++K+KE+EEKDVVAQQNMYAQ
Sbjct  1622  GKVDELVKDRIEAQNEVKSKEKEEKDVVAQQNMYAQ  1657


>gi|62321465|dbj|BAD94884.1|  hypothetical protein [Arabidopsis thaliana]
Length=152

 Score = 45.4 bits (106),  Expect = 2e-04
 Identities = 27/36 (75%), Positives = 34/36 (94%), Gaps = 0/36 (0%)
 Frame = +1

Query  1    GKVDELVKDKIEAMNQLkakeeeekDVVAQQNMYAQ  108
            GKVDEL+KDK+EA  ++KAKE+EEKDV++QQNMYAQ
Sbjct  71   GKVDELIKDKLEAQKEVKAKEQEEKDVISQQNMYAQ  106


>gi|20453062|gb|AAM19776.1|  AT3g08530/T8G24_1 [Arabidopsis thaliana]
 gi|21928019|gb|AAM78038.1|  AT3g08530/T8G24_1 [Arabidopsis thaliana]
Length=694

 Score = 45.4 bits (106),  Expect = 2e-04
 Identities = 27/36 (75%), Positives = 34/36 (94%), Gaps = 0/36 (0%)
 Frame = +1

Query  1    GKVDELVKDKIEAMNQLkakeeeekDVVAQQNMYAQ  108
            GKVDEL+KDK+EA  ++KAKE+EEKDV++QQNMYAQ
Sbjct  613  GKVDELIKDKLEAQKEVKAKEQEEKDVISQQNMYAQ  648


>gi|12321552|gb|AAG50828.1|AC074395_2  clathrin heavy chain, putative [Arabidopsis thaliana]
Length=1516

 Score = 45.4 bits (106),  Expect = 2e-04
 Identities = 27/36 (75%), Positives = 34/36 (94%), Gaps = 0/36 (0%)
 Frame = +1

Query  1     GKVDELVKDKIEAMNQLkakeeeekDVVAQQNMYAQ  108
             GKVDEL+KDK+EA  ++KAKE+EEKDV++QQNMYAQ
Sbjct  1435  GKVDELIKDKLEAQKEVKAKEQEEKDVISQQNMYAQ  1470


>gi|42563757|ref|NP_187466.4|  structural molecule [Arabidopsis thaliana]
 gi|110740394|dbj|BAF02092.1|  hypothetical protein [Arabidopsis thaliana]
Length=1703

 Score = 45.4 bits (106),  Expect = 2e-04
 Identities = 27/36 (75%), Positives = 34/36 (94%), Gaps = 0/36 (0%)
 Frame = +1

Query  1     GKVDELVKDKIEAMNQLkakeeeekDVVAQQNMYAQ  108
             GKVDEL+KDK+EA  ++KAKE+EEKDV++QQNMYAQ
Sbjct  1622  GKVDELIKDKLEAQKEVKAKEQEEKDVISQQNMYAQ  1657


>gi|115486882|ref|NP_001065928.1|  Os12g0104800 [Oryza sativa (japonica cultivar-group)]
 gi|113648435|dbj|BAF28947.1|  Os12g0104800 [Oryza sativa (japonica cultivar-group)]
Length=122

 Score = 44.7 bits (104),  Expect = 3e-04
 Identities = 27/35 (77%), Positives = 34/35 (97%), Gaps = 0/35 (0%)
 Frame = +1

Query  4    KVDELVKDKIEAMNQLkakeeeekDVVAQQNMYAQ  108
            KVDELVKD+IE+ N+++AKE+EEKD+VAQQNMYAQ
Sbjct  37   KVDELVKDRIESQNEVRAKEKEEKDLVAQQNMYAQ  71


>gi|115483737|ref|NP_001065530.1|  Os11g0104900 [Oryza sativa (japonica cultivar-group)]
 gi|113644234|dbj|BAF27375.1|  Os11g0104900 [Oryza sativa (japonica cultivar-group)]
Length=1695

 Score = 44.7 bits (104),  Expect = 3e-04
 Identities = 27/35 (77%), Positives = 34/35 (97%), Gaps = 0/35 (0%)
 Frame = +1

Query  4     KVDELVKDKIEAMNQLkakeeeekDVVAQQNMYAQ  108
             KVDELVKD+IE+ N+++AKE+EEKD+VAQQNMYAQ
Sbjct  1610  KVDELVKDRIESQNEVRAKEKEEKDLVAQQNMYAQ  1644


>gi|110739736|dbj|BAF01775.1|  hypothetical protein [Arabidopsis thaliana]
Length=244

 Score = 44.7 bits (104),  Expect = 3e-04
 Identities = 27/36 (75%), Positives = 34/36 (94%), Gaps = 0/36 (0%)
 Frame = +1

Query  1    GKVDELVKDKIEAMNQLkakeeeekDVVAQQNMYAQ  108
            GKVDEL+KDK+EA  ++KAKE+EEKDV++QQNMYAQ
Sbjct  161  GKVDELIKDKLEAQKEVKAKEQEEKDVMSQQNMYAQ  196


>gi|92898022|gb|ABE94026.1|  Clathrin propeller, N-terminal; Protein prenyltransferase [Medicago 
truncatula]
Length=1705

 Score = 44.7 bits (104),  Expect = 3e-04
 Identities = 28/36 (77%), Positives = 34/36 (94%), Gaps = 0/36 (0%)
 Frame = +1

Query  1     GKVDELVKDKIEAMNQLkakeeeekDVVAQQNMYAQ  108
             GKVDELVK KIE+ N++KAKE+EEK+V+AQQNMYAQ
Sbjct  1623  GKVDELVKHKIESQNEVKAKEQEEKEVIAQQNMYAQ  1658


>gi|6016683|gb|AAF01510.1|AC009991_6  putative clathrin heavy chain [Arabidopsis thaliana]
 gi|12321871|gb|AAG50967.1|AC073395_9  clathrin heavy chain, putative; 28833-19741 [Arabidopsis thaliana]
Length=1705

 Score = 44.7 bits (104),  Expect = 3e-04
 Identities = 27/36 (75%), Positives = 34/36 (94%), Gaps = 0/36 (0%)
 Frame = +1

Query  1     GKVDELVKDKIEAMNQLkakeeeekDVVAQQNMYAQ  108
             GKVDEL+KDK+EA  ++KAKE+EEKDV++QQNMYAQ
Sbjct  1622  GKVDELIKDKLEAQKEVKAKEQEEKDVMSQQNMYAQ  1657


>gi|77552802|gb|ABA95598.1|  Clathrin heavy chain, putative, expressed [Oryza sativa (japonica 
cultivar-group)]
Length=1708

 Score = 44.7 bits (104),  Expect = 3e-04
 Identities = 27/35 (77%), Positives = 34/35 (97%), Gaps = 0/35 (0%)
 Frame = +1

Query  4     KVDELVKDKIEAMNQLkakeeeekDVVAQQNMYAQ  108
             KVDELVKD+IE+ N+++AKE+EEKD+VAQQNMYAQ
Sbjct  1623  KVDELVKDRIESQNEVRAKEKEEKDLVAQQNMYAQ  1657


>gi|77548264|gb|ABA91061.1|  Clathrin heavy chain, putative, expressed [Oryza sativa (japonica 
cultivar-group)]
Length=1708

 Score = 44.7 bits (104),  Expect = 3e-04
 Identities = 27/35 (77%), Positives = 34/35 (97%), Gaps = 0/35 (0%)
 Frame = +1

Query  4     KVDELVKDKIEAMNQLkakeeeekDVVAQQNMYAQ  108
             KVDELVKD+IE+ N+++AKE+EEKD+VAQQNMYAQ
Sbjct  1623  KVDELVKDRIESQNEVRAKEKEEKDLVAQQNMYAQ  1657


>gi|30681617|ref|NP_187724.2|  structural molecule [Arabidopsis thaliana]
 gi|110738758|dbj|BAF01303.1|  hypothetical protein [Arabidopsis thaliana]
Length=1705

 Score = 44.7 bits (104),  Expect = 3e-04
 Identities = 27/36 (75%), Positives = 34/36 (94%), Gaps = 0/36 (0%)
 Frame = +1

Query  1     GKVDELVKDKIEAMNQLkakeeeekDVVAQQNMYAQ  108
             GKVDEL+KDK+EA  ++KAKE+EEKDV++QQNMYAQ
Sbjct  1622  GKVDELIKDKLEAQKEVKAKEQEEKDVMSQQNMYAQ  1657


>gi|116059036|emb|CAL54743.1|  unnamed protein product [Ostreococcus tauri]
Length=802

 Score = 32.3 bits (72),  Expect = 1.5
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 0/41 (0%)
 Frame = +3

Query  96   YVCSVAASCFTCTSNAWNGWKFCSTTTTTSNEWDGDASNGT  218
            YV    A+     SNAW    FCS+    + +W G AS  T
Sbjct  137  YVTEDIANADAVASNAWTFHSFCSSHLEEARQWSGSASGVT  177


>gi|15219699|ref|NP_174809.1|  ATP binding / protein kinase/ protein serine/threonine kinase/ 
protein-tyrosine kinase [Arabidopsis thaliana]
 gi|8778966|gb|AAF79881.1|AC021198_1  Contains similarity to receptor protein kinase-like protein from 
Arabidopsis thaliana gb|AL161513.  It contains a eukaryotic 
protein kinase domain PF|00069.  EST gb|AI997574 comes from 
this gene
Length=1120

 Score = 30.8 bits (68),  Expect = 4.4
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 0/47 (0%)
 Frame = +3

Query  102  CSVAASCFTCTSNAWNGWKFCSTTTTTSNEWDGDASNGTLWHATNGF  242
            CS++AS     +NA   WK   T ++  + W  DA+  T +  T+ +
Sbjct  23   CSISASATIAEANALLKWKSTFTNSSKLSSWVHDANTNTSFSCTSWY  69


>gi|4586878|dbj|BAA76516.1|  HR7 [Hyoscyamus niger]
Length=103

 Score = 30.0 bits (66),  Expect = 7.5
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +3

Query  84   CSAEYVCSVAASCFTCTSNAWNGWKF-CSTTTTTSNEWDG  200
            C+ E  CS    C+ C  +A+ GW+  C   T T   + G
Sbjct  54   CNVESDCSDGWLCYNCVPSAFEGWRSQCDKLTVTGEGYFG  93

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 326
Number of extensions: 3
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 645
Length of database: 101054579
Length adjustment: 109
Effective length of query: 536
Effective length of database: 70169538
Effective search space: 7437971028
Effective search space used: 7437971028
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 65 (29.6 bits)