Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168937633-11414-165754544402.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig200 Length=661
Score E Sequences producing significant alignments: (Bits) Value gi|30013657|gb|AAP03871.1| oxygen evolving complex 33 kDa pho... 340 5e-100 gi|119952178|dbj|BAA96365.3| oxygen evolving enhancer protein... 342 8e-100 gi|61697115|gb|AAX53163.1| chloroplast photosynthetic oxygen-... 338 2e-99 gi|131385|sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer prote... 339 3e-99 gi|809113|emb|CAA35601.1| 33kDa precursor protein of oxygen-e... 339 3e-99 gi|11134054|sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer pro... 337 3e-99 gi|12644171|sp|P23322|PSBO_LYCES Oxygen-evolving enhancer pro... 329 8e-97 gi|131384|sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein... 311 4e-91 gi|131386|sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer prote... 301 6e-89 gi|81478|pir||S00415 photosystem II oxygen-evolving complex p... 301 6e-89 gi|115436780|ref|NP_001043134.1| Os01g0501800 [Oryza sativa (... 301 3e-88 gi|15230324|ref|NP_190651.1| PSBO-2/PSBO2; oxygen evolving [A... 303 8e-88 gi|11133881|sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer pro... 301 1e-87 gi|49359169|gb|AAT65501.1| photosystem II protein [Brassica oler 303 7e-87 gi|13926291|gb|AAK49614.1|AF372898_1 AT5g66570/K1F13_25 [Arabido 302 7e-87 gi|21593220|gb|AAM65169.1| 33 kDa polypeptide of oxygen-evolv... 302 7e-87 gi|15240013|ref|NP_201458.1| PSBO-1 (OXYGEN-EVOLVING ENHANCER... 302 7e-87 gi|15912247|gb|AAL08257.1| AT5g66570/K1F13_25 [Arabidopsis thali 300 2e-86 gi|22530906|gb|AAM96957.1| 33 kDa polypeptide of oxygen-evolv... 300 3e-86 gi|15451006|gb|AAK96774.1| 33 kDa polypeptide of oxygen-evolv... 298 6e-86 gi|108951293|gb|ABG25040.1| 33kDa precursor protein of oxygen... 313 4e-85 gi|22571|emb|CAA36675.1| 33 kDa oxygen-evolving protein [Arabido 296 4e-85 gi|108951295|gb|ABG25041.1| 33kDa precursor protein of oxygen... 311 1e-84 gi|131388|sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer prote... 285 1e-80 gi|45181461|gb|AAS55410.1| photosystem II protein; PsbO [Brassic 274 2e-73 gi|5052366|gb|AAD38521.1|AF139818_1 33 kDa oxygen evolving pr... 267 2e-71 gi|739292|prf||2002393A oxygen-evolving complex protein 1 231 2e-67 gi|224916|prf||1204192A photosystem II protein 33kD 219 2e-64 gi|11134152|sp|Q9SBN6|PSBO_VOLCA Oxygen-evolving enhancer pro... 152 8e-38 gi|74272687|gb|ABA01139.1| chloroplast oxygen-evolving enhanc... 143 5e-35 gi|131382|sp|P12853|PSBO_CHLRE Oxygen-evolving enhancer prote... 143 6e-35 gi|116054689|emb|CAL56766.1| unnamed protein product [Ostreococc 105 2e-22 gi|38455498|gb|AAR20846.1| oxygen-evolving enhancer protein 1 [' 69.7 7e-17 gi|32363253|sp|P83504|PSBO_BRARA Oxygen-evolving enhancer protei 63.2 8e-10 gi|40455720|gb|AAR85969.1| ERT12 [Nicotiana tabacum] 42.7 6e-04 gi|15235478|ref|NP_195440.1| calcium ion binding [Arabidopsis... 39.7 0.010 gi|109892869|sp||P84718_1 [Segment 1 of 10] Putative oxygen-e... 35.8 0.14 gi|7406466|emb|CAB85568.1| 8-amino-7-oxononanoate synthase-li... 32.7 1.2 gi|42573269|ref|NP_974731.1| transaminase/ transferase, trans... 32.7 1.2 gi|115479501|ref|NP_001063344.1| Os09g0453400 [Oryza sativa (... 32.3 1.6 gi|4115365|gb|AAD03367.1| putative retroelement pol polyprotein 31.2 3.5 gi|50838966|gb|AAT81727.1| expressed protein, having alternat... 30.4 6.0 gi|48843819|gb|AAT47078.1| unknown protein [Oryza sativa (japoni 30.4 6.0 gi|46806536|dbj|BAD17649.1| unknown protein [Oryza sativa (japon 30.4 6.0 gi|62734751|gb|AAX96860.1| retrotransposon protein, putative,... 30.0 7.9
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 487 Number of extensions: 6 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 661 Length of database: 101054579 Length adjustment: 109 Effective length of query: 552 Effective length of database: 70169538 Effective search space: 7788818718 Effective search space used: 7788818718 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 65 (29.6 bits)