RID=1168938384-23474-212814711876.BLASTQ4, Contig214

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168938384-23474-212814711876.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Score E Sequences producing significant alignments: (Bits) Value gi|6693031|gb|AAF24957.1|AC012375_20 T22C5.27 [Arabidopsis thali 31.2 1.3 gi|12320881|gb|AAG50572.1|AC079280_3 mutator-like transposase, p 31.2 1.3 gi|92876043|gb|ABE83797.1| hypothetical protein MtrDRAFT_AC12... 30.0 2.8 gi|87240483|gb|ABD32341.1| N-6 Adenine-specific DNA methylase... 28.5 8.1

Alignments

 

>gi|6693031|gb|AAF24957.1|AC012375_20  T22C5.27 [Arabidopsis thaliana]
Length=943

 Score = 31.2 bits (69),  Expect = 1.3
 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
 Frame = +3

Query  105  QKNNSLYHSASAYQLTKNLAK-------QLQTNSAPYTEKCSRWDSLHKQKASLPRNXNL  263
            Q +N +  +A AYQ+     K        L  ++AP   K + + + H       +N N 
Sbjct  318  QNDNGVVTAAEAYQVYNEFPKLHGGELANLGNDAAPVNFKITSYATTHTCNIDSRKNYNK  377

Query  264  TYNYKLLRVSTRSMTPARAG  323
              NYKLL    RS+  +  G
Sbjct  378  HANYKLLGEVVRSIYSSTQG  397


>gi|12320881|gb|AAG50572.1|AC079280_3  mutator-like transposase, putative [Arabidopsis thaliana]
Length=749

 Score = 31.2 bits (69),  Expect = 1.3
 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
 Frame = +3

Query  105  QKNNSLYHSASAYQLTKNLAK-------QLQTNSAPYTEKCSRWDSLHKQKASLPRNXNL  263
            Q +N +  +A AYQ+     K        L  ++AP   K + + + H       +N N 
Sbjct  318  QNDNGVVTAAEAYQVYNEFPKLHGGELANLGNDAAPVNFKITSYATTHTCNIDSRKNYNK  377

Query  264  TYNYKLLRVSTRSMTPARAG  323
              NYKLL    RS+  +  G
Sbjct  378  HANYKLLGEVVRSIYSSTQG  397


>gi|92876043|gb|ABE83797.1|  hypothetical protein MtrDRAFT_AC124954g20v1 [Medicago truncatula]
Length=133

 Score = 30.0 bits (66),  Expect = 2.8
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +2

Query  20   IALNSVLILKTVKIPLEQYIYHPLDFSHTKK  112
            +ALN +L+LK +  P E +I+H L   H+ K
Sbjct  36   VALNRLLLLKKISFPFELFIFH-LTLRHSNK  65


>gi|87240483|gb|ABD32341.1|  N-6 Adenine-specific DNA methylase; Homeodomain-related [Medicago 
truncatula]
 gi|92887654|gb|ABE88984.1|  N-6 Adenine-specific DNA methylase; Homeodomain-related [Medicago 
truncatula]
Length=358

 Score = 28.5 bits (62),  Expect = 8.1
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 0/42 (0%)
 Frame = +3

Query  93   TFHIQKNNSLYHSASAYQLTKNLAKQLQTNSAPYTEKCSRWD  218
            TFH   NN  ++ AS      +   QL +NSA   E  S  D
Sbjct  292  TFHCNNNNQNFNFASVLSTPSSSPTQLNSNSANMNESSSTED  333

Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 321 Number of extensions: 5 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 418 Length of database: 101054579 Length adjustment: 101 Effective length of query: 317 Effective length of database: 72436330 Effective search space: 2752580540 Effective search space used: 2752580540 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)

Distribution of 4 Blast Hits on the Query Sequence