Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168926827-16308-107293416531.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig23 Length=660
Score E Sequences producing significant alignments: (Bits) Value gi|91680591|emb|CAJ45566.1| Alb protein [Arabidopsis thaliana] 343 2e-94 gi|15221768|ref|NP_173858.1| ARTEMIS (ARABIDOPSIS THALIANA EN... 343 2e-94 gi|9743337|gb|AAF97961.1|AC000103_11 F21J9.16 [Arabidopsis thali 332 1e-90 gi|115456545|ref|NP_001051873.1| Os03g0844700 [Oryza sativa (... 326 4e-89 gi|108712061|gb|ABF99856.1| ARTEMIS protein, chloroplast prec... 326 4e-89 gi|41469653|gb|AAS07376.1| putative inner membrane protein (w... 326 4e-89 gi|92877556|gb|ABE84634.1| 60 kDa inner membrane insertion prote 313 3e-85 gi|15226968|ref|NP_180446.1| ALB3 (ALBINO 3); protein translo... 304 2e-82 gi|30684018|ref|NP_850125.1| ALB3 (ALBINO 3); protein translocas 303 4e-82 gi|21592693|gb|AAM64642.1| chloroplast membrane protein ALBINO3 301 2e-81 gi|115434560|ref|NP_001042038.1| Os01g0151200 [Oryza sativa (... 299 5e-81 gi|110741684|dbj|BAE98788.1| hypothetical protein [Arabidopsis t 297 3e-80 gi|9886727|emb|CAC04249.1| PPF-1 protein [Pisum sativum] 297 3e-80 gi|38372402|sp|Q9FY06|PPF1_PEA Inner membrane protein PPF-1, ... 296 3e-80 gi|38372239|sp|Q8LKI3|ALB32_CHLRE Inner membrane ALBINO3-like... 246 5e-65 gi|108712059|gb|ABF99854.1| ARTEMIS protein, chloroplast prec... 243 5e-64 gi|116056584|emb|CAL52873.1| Inner membrane protein transloca... 240 4e-63 gi|57901135|gb|AAW57888.1| albino3-like protein [Gonium pectoral 222 8e-58 gi|38372242|sp|Q8S339|ALB31_CHLRE Inner membrane ALBINO3-like... 214 2e-55 gi|116057665|emb|CAL53868.1| Inner membrane protein transloca... 160 5e-39 gi|110740108|dbj|BAF01955.1| chloroplast membrane protein [Arabi 95.9 1e-19 gi|116058229|emb|CAL53418.1| Inner membrane protein transloca... 45.8 1e-04 gi|41469652|gb|AAS07375.1| putative inner membrane protein (w... 44.7 3e-04 gi|15225991|ref|NP_182170.1| unknown protein [Arabidopsis tha... 43.9 5e-04 gi|77551472|gb|ABA94269.1| expressed protein [Oryza sativa (japo 33.9 0.55 gi|116056924|emb|CAL53213.1| intramembrane protease, putative (I 32.7 1.2 gi|115486807|ref|NP_001068547.1| Os11g0704800 [Oryza sativa (... 31.6 2.7 gi|116309640|emb|CAH66692.1| OSIGBa0097A15.7 [Oryza sativa (indi 30.8 4.6 gi|38346593|emb|CAE04657.2| OSJNBa0061G20.13 [Oryza sativa (japo 30.8 4.6 gi|51701320|sp|Q6R2V6|CAPP2_CHLRE Phosphoenolpyruvate carboxy... 30.4 6.0 gi|116059874|emb|CAL55581.1| Inner membrane protein transloca... 30.0 7.9 gi|115454715|ref|NP_001050958.1| Os03g0692000 [Oryza sativa (... 30.0 7.9
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 473 Number of extensions: 9 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 660 Length of database: 101054579 Length adjustment: 109 Effective length of query: 551 Effective length of database: 70169538 Effective search space: 7788818718 Effective search space used: 7788818718 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 65 (29.6 bits)