Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168939198-27931-27316791369.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig230 Length=671
Score E Sequences producing significant alignments: (Bits) Value gi|62752942|gb|AAX98670.1| HDZip I protein [Glycine max] 256 7e-68 gi|1435021|dbj|BAA05624.1| DNA-binding protein [Daucus carota] 229 7e-60 gi|15148918|gb|AAK84886.1|AF402605_1 homeodomain leucine zipper 214 3e-55 gi|1161575|emb|CAA64417.1| homeobox [Solanum lycopersicum] 198 2e-50 gi|119331578|gb|ABL63115.1| DNA-binding protein [Catharanthus ro 197 3e-50 gi|6018089|gb|AAF01765.1|AF184278_1 homeodomain-leucine zipper p 190 4e-48 gi|15148916|gb|AAK84885.1|AF402604_1 homeodomain leucine zipper 129 1e-29 gi|7415624|dbj|BAA93465.1| homeobox protein PpHB6 [Physcomitrell 129 1e-29 gi|18034445|gb|AAL57497.1|AF443623_1 homeodomain leucine zipp... 125 1e-28 gi|7415622|dbj|BAA93464.1| homeobox protein PpHB5 [Physcomitrell 124 2e-28 gi|18034441|gb|AAL57495.1|AF443621_1 homeodomain leucine zipp... 124 4e-28 gi|18034443|gb|AAL57496.1|AF443622_1 homeodomain leucine zipp... 124 4e-28 gi|15232122|ref|NP_186796.1| ATHB-1; transcription factor [Ar... 124 4e-28 gi|6091551|gb|AAF01764.2|AF184277_1 homeodomain-leucine zipper p 121 3e-27 gi|115448457|ref|NP_001048008.1| Os02g0729700 [Oryza sativa (... 115 1e-25 gi|21623495|dbj|BAA93466.2| homeobox protein PpHB7 [Physcomit... 115 1e-25 gi|27531102|dbj|BAC54164.1| homeobox protein Pphb7 long form [Ph 115 1e-25 gi|5305602|gb|AAD41726.1| homeobox protein ATHB6 [Arabidopsis th 115 2e-25 gi|18399966|ref|NP_565536.1| ATHB6; transcription factor [Ara... 115 2e-25 gi|15148920|gb|AAK84887.1|AF402606_1 homeodomain leucine zipper 114 3e-25 gi|76577747|gb|ABA54144.1| homeobox-leucine zipper-like protein 114 3e-25 gi|115479685|ref|NP_001063436.1| Os09g0470500 [Oryza sativa (... 114 4e-25 gi|46242599|gb|AAS83417.1| Hox16 [Oryza sativa (japonica cultiva 113 6e-25 gi|45593096|gb|AAS68137.1| homeodomain leucine zipper protein... 113 6e-25 gi|1435019|dbj|BAA05622.1| DNA-binding protein [Daucus carota] 113 6e-25 gi|7415628|dbj|BAA93467.1| homeobox protein Pphb8 [Physcomitrell 113 6e-25 gi|92893529|gb|ABE91803.1| Leucine zipper, homeobox-associate... 113 7e-25 gi|22651698|gb|AAM48290.1| homeodomain protein Hfi22 [Nicotiana 113 7e-25 gi|8133126|gb|AAF73482.1|AF268422_1 hb-6-like protein [Brassica 113 7e-25 gi|86129714|gb|ABC86566.1| homeodomain-leucine zipper transcr... 112 1e-24 gi|37911268|gb|AAR04932.1| homeodomain-leucine zipper protein [B 112 1e-24 gi|115476936|ref|NP_001062064.1| Os08g0481400 [Oryza sativa (... 112 1e-24 gi|7415616|dbj|BAA93461.1| homeobox protein PpHB2 [Physcomitrell 111 2e-24 gi|7415614|dbj|BAA93460.1| homeobox protein PpHB1 [Physcomitrell 111 2e-24 gi|166754|gb|AAA32816.1| homeobox protein 110 5e-24 gi|11231065|dbj|BAB18171.1| homeobox-leucine zipper protein [Zin 110 6e-24 gi|5006855|gb|AAD37698.1|AF145729_1 homeodomain leucine zipper p 109 8e-24 gi|115476422|ref|NP_001061807.1| Os08g0416000 [Oryza sativa (... 109 8e-24 gi|7415630|dbj|BAA93468.1| homeobox protein PpHB9 [Physcomitrell 109 8e-24 gi|49659431|dbj|BAD27254.1| SlHDL1 [Silene latifolia] 109 1e-23 gi|4433048|dbj|BAA21017.1| DNA-binding protein [Daucus carota] 109 1e-23 gi|115451237|ref|NP_001049219.1| Os03g0188900 [Oryza sativa (... 107 3e-23 gi|15450982|gb|AAK96762.1| homeodomain-like protein [Arabidop... 107 3e-23 gi|4490757|emb|CAB38919.1| homeodomain-like protein [Arabidopsis 107 3e-23 gi|15236109|ref|NP_195716.1| ATHB16; transcription factor [Ar... 107 3e-23 gi|113205174|gb|AAT40518.2| Homeobox-leucine zipper protein H... 107 5e-23 gi|86129716|gb|ABC86567.1| homeodomain-leucine zipper transcr... 107 5e-23 gi|1435020|dbj|BAA05623.1| DNA-binding protein [Daucus carota] 107 5e-23 gi|1076569|pir||S51929 homeotic protein CHB5 - carrot 107 5e-23 gi|46242605|gb|AAS83420.1| Hox13 [Oryza sativa (japonica cultiva 106 7e-23 gi|16334|emb|CAA44513.1| Athb-3 [Arabidopsis thaliana] 106 7e-23 gi|549891|gb|AAA56906.1| homeobox protein 106 7e-23 gi|79332441|ref|NP_001032151.1| ATHB5 [Arabidopsis thaliana] 106 7e-23 gi|30685207|ref|NP_568309.2| ATHB-3 (ARABIDOPSIS THALIANA HOM... 106 7e-23 gi|15238405|ref|NP_201334.1| ATHB5; transcription factor [Ara... 106 7e-23 gi|7671484|emb|CAB89325.1| homeobox-leucine zipper protein HAT7 106 7e-23 gi|21593221|gb|AAM65170.1| putative homeobox-leucine zipper p... 106 9e-23 gi|18034439|gb|AAL57494.1|AF443620_1 homeodomain leucine zipp... 106 9e-23 gi|15232066|ref|NP_186771.1| DNA binding / transcription fact... 106 9e-23 gi|113205186|gb|AAT39931.2| Homeobox-leucine zipper protein H... 105 2e-22 gi|48209882|gb|AAT40488.1| putative DNA-binding protein [Sola... 105 2e-22 gi|48057626|gb|AAT39949.1| Homeobox-leucine zipper protein HA... 105 2e-22 gi|24756881|gb|AAN64145.1| Unknown protein [Oryza sativa (japoni 105 2e-22 gi|6723679|emb|CAB67118.1| homeodomain protein [Solanum lycopers 105 2e-22 gi|21555784|gb|AAM63933.1| homeobox gene 13 protein [Arabidopsis 105 2e-22 gi|6175248|gb|AAF04916.1|AF011556_1 jasmonic acid 1 [Lycopersico 105 2e-22 gi|15222452|ref|NP_177136.1| ATHB13; DNA binding / transcript... 105 2e-22 gi|108706411|gb|ABF94206.1| DNA-binding protein, putative, ex... 103 4e-22 gi|19071644|gb|AAL84311.1|AC073556_28 putative DNA-binding pr... 103 4e-22 gi|119331580|gb|ABL63116.1| DNA-binding protein [Catharanthus ro 103 6e-22 gi|1435022|dbj|BAA05625.1| DNA-binding protein [Daucus carota] 103 6e-22 gi|92872807|gb|ABE81362.1| Leucine zipper, homeobox-associate... 103 8e-22 gi|349379|gb|AAA63765.1| HAHB-1 103 8e-22 gi|15228625|ref|NP_191748.1| ATHB-12; transcription factor [A... 100 6e-21 gi|33772271|gb|AAQ54570.1| homeodomain leucine zipper protein [M 99.8 8e-21 gi|541872|pir||B44088 homeotic protein HAT5 - Arabidopsis thalia 99.8 8e-21 gi|115481926|ref|NP_001064556.1| Os10g0404900 [Oryza sativa (... 99.0 1e-20 gi|92892229|gb|ABE91214.1| Leucine zipper, homeobox-associate... 98.6 2e-20 gi|3153207|gb|AAC39462.1| ATHB-12 [Arabidopsis thaliana] 97.8 3e-20 gi|115481764|ref|NP_001064475.1| Os10g0377300 [Oryza sativa (... 96.7 7e-20 gi|19920110|gb|AAM08542.1|AC079935_14 Putative homeodomain leuci 96.7 7e-20 gi|78708410|gb|ABB47385.1| Homeobox domain containing protein... 96.7 7e-20 gi|33943626|gb|AAQ55492.1| homeodomain leucine-zipper protein... 96.7 7e-20 gi|3868841|dbj|BAA34241.1| CRHB7 [Ceratopteris richardii] 96.3 9e-20 gi|3868835|dbj|BAA34238.1| CRHB4 [Ceratopteris richardii] 95.9 1e-19 gi|5031277|gb|AAD38144.1|AF139497_1 homeobox leucine zipper prot 94.7 3e-19 gi|3868849|dbj|BAA34245.1| CRHB11 [Ceratopteris richardii] 94.4 3e-19 gi|3868839|dbj|BAA34240.1| CRHB6 [Ceratopteris richardii] 94.4 3e-19 gi|79353238|ref|NP_174025.3| nucleic acid binding / transcrip... 94.0 5e-19 gi|629527|pir||S47137 homeotic protein Athb-7 - Arabidopsis t... 93.2 8e-19 gi|15226424|ref|NP_182191.1| ATHB-7 (ARABIDOPSIS THALIANA HOM... 93.2 8e-19 gi|3868843|dbj|BAA34242.1| CRHB8 [Ceratopteris richardii] 93.2 8e-19 gi|92887886|gb|ABE89090.1| Leucine zipper, homeobox-associate... 91.3 3e-18 gi|79324931|ref|NP_001031550.1| ATHB-7 (ARABIDOPSIS THALIANA HOM 90.9 4e-18 gi|115480285|ref|NP_001063736.1| Os09g0528200 [Oryza sativa (... 90.5 5e-18 gi|52077331|dbj|BAD46372.1| putative homeodomain leucine zipp... 90.5 5e-18 gi|115447605|ref|NP_001047582.1| Os02g0649300 [Oryza sativa (... 90.5 5e-18 gi|92870919|gb|ABE80119.1| Homeodomain-related [Medicago truncat 90.1 7e-18 gi|37147908|gb|AAQ88401.1| HD-ZIP [Capsicum annuum] 89.4 1e-17 gi|18396130|ref|NP_564268.1| DNA binding / transcription fact... 89.4 1e-17
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 483 Number of extensions: 7 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 671 Length of database: 101054579 Length adjustment: 109 Effective length of query: 562 Effective length of database: 70169538 Effective search space: 7999327332 Effective search space used: 7999327332 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 65 (29.6 bits)