Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168939273-2748-122200066505.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig233 Length=582
Score E Sequences producing significant alignments: (Bits) Value gi|18424719|ref|NP_568974.1| ATFP3; metal ion binding [Arabid... 223 4e-58 gi|4097547|gb|AAD09507.1| ATFP3 [Arabidopsis thaliana] 223 4e-58 gi|9758294|dbj|BAB08818.1| unnamed protein product [Arabidopsis 223 4e-58 gi|62318564|dbj|BAD94944.1| putative protein [Arabidopsis thalia 201 2e-51 gi|116309351|emb|CAH66434.1| OSIGBa0096P03.8 [Oryza sativa (i... 183 3e-46 gi|115458078|ref|NP_001052639.1| Os04g0390100 [Oryza sativa (... 181 2e-45 gi|115446309|ref|NP_001046934.1| Os02g0510600 [Oryza sativa (... 180 4e-45 gi|15241256|ref|NP_199887.1| metal ion binding [Arabidopsis t... 166 6e-41 gi|24417342|gb|AAN60281.1| unknown [Arabidopsis thaliana] 150 2e-36 gi|15233023|ref|NP_186946.1| copper ion binding / metal ion b... 144 2e-34 gi|115481458|ref|NP_001064322.1| Os10g0209700 [Oryza sativa (... 144 2e-34 gi|115471641|ref|NP_001059419.1| Os07g0298900 [Oryza sativa (... 106 7e-23 gi|110740642|dbj|BAE98424.1| putative farnesylated protein [Arab 100 3e-21 gi|18404283|ref|NP_565855.1| metal ion binding [Arabidopsis t... 100 3e-21 gi|48716472|dbj|BAD23078.1| putative farnesylated protein [Or... 100 5e-21 gi|115456761|ref|NP_001051981.1| Os03g0861400 [Oryza sativa (... 99.4 8e-21 gi|21594005|gb|AAM65923.1| unknown [Arabidopsis thaliana] 97.4 3e-20 gi|42573467|ref|NP_974830.1| copper ion binding / metal ion bind 97.4 3e-20 gi|18420811|ref|NP_568449.1| copper ion binding / metal ion b... 97.4 3e-20 gi|92877365|gb|ABE84491.1| PPAK motif; Heavy metal transport/... 97.1 4e-20 gi|22327990|ref|NP_200888.2| metal ion binding [Arabidopsis t... 95.1 2e-19 gi|92878647|gb|ABE85166.1| Heavy metal transport/detoxificati... 94.7 2e-19 gi|15226333|ref|NP_180376.1| metal ion binding [Arabidopsis t... 90.9 3e-18 gi|15218784|ref|NP_174195.1| metal ion binding [Arabidopsis t... 80.1 5e-15 gi|15242741|ref|NP_195958.1| metal ion binding [Arabidopsis t... 75.1 2e-13 gi|79326820|ref|NP_001031825.1| metal ion binding [Arabidopsis t 72.8 8e-13 gi|115450777|ref|NP_001048989.1| Os03g0152000 [Oryza sativa (... 72.0 1e-12 gi|31432315|gb|AAP53965.1| heavy metal-associated domain cont... 62.8 9e-10 gi|115460206|ref|NP_001053703.1| Os04g0590100 [Oryza sativa (... 59.3 1e-08 gi|21536547|gb|AAM60879.1| farnesylated protein (ATFP6) [Arabido 58.2 2e-08 gi|15233937|ref|NP_195570.1| ATFP6 (FARNESYLATED PROTEIN 6); ... 58.2 2e-08 gi|4097573|gb|AAD09515.1| GMFP7 [Glycine max] 56.2 8e-08 gi|15233077|ref|NP_188786.1| copper ion binding / metal ion b... 56.2 8e-08 gi|11994385|dbj|BAB02344.1| unnamed protein product [Arabidopsis 56.2 8e-08 gi|92871489|gb|ABE80468.1| Heavy metal transport/detoxificati... 55.8 1e-07 gi|30679432|ref|NP_187173.2| ATP binding / metal ion binding ... 55.5 1e-07 gi|79547451|ref|NP_201412.2| metal ion binding [Arabidopsis t... 55.5 1e-07 gi|92890059|gb|ABE90127.1| Heavy metal transport/detoxificati... 53.9 4e-07 gi|115465099|ref|NP_001056149.1| Os05g0534500 [Oryza sativa (... 52.8 9e-07 gi|45680423|gb|AAS75224.1| unknown protein [Oryza sativa (japoni 52.8 9e-07 gi|115450819|ref|NP_001049010.1| Os03g0156600 [Oryza sativa (... 52.4 1e-06 gi|4097545|gb|AAD09506.1| ATFP2 [Arabidopsis thaliana] 52.4 1e-06 gi|110738014|dbj|BAF00942.1| hypothetical protein [Arabidopsis t 52.0 2e-06 gi|115442043|ref|NP_001045301.1| Os01g0933200 [Oryza sativa (... 52.0 2e-06 gi|18397481|ref|NP_566273.1| metal ion binding [Arabidopsis t... 52.0 2e-06 gi|18418567|ref|NP_567975.1| metal ion binding [Arabidopsis t... 52.0 2e-06 gi|28866019|emb|CAD70173.1| farnesylated protein 3 [Hordeum vulg 52.0 2e-06 gi|47176684|gb|AAT12488.1| copper chaperone [Populus alba x P... 51.6 2e-06 gi|115457408|ref|NP_001052304.1| Os04g0244800 [Oryza sativa (... 51.6 2e-06 gi|9885429|gb|AAG01446.1|AF280056_1 putative copper chaperone... 51.6 2e-06 gi|18855048|gb|AAL79740.1|AC096687_4 hypothetical protein [Or... 51.6 2e-06 gi|115440039|ref|NP_001044299.1| Os01g0758000 [Oryza sativa (... 51.2 3e-06 gi|57900370|dbj|BAD87580.1| copper-binding protein-like [Oryz... 51.2 3e-06 gi|30687142|ref|NP_850851.1| metal ion binding [Arabidopsis thal 51.2 3e-06 gi|15239643|ref|NP_197410.1| metal ion binding [Arabidopsis thal 51.2 3e-06 gi|23304411|emb|CAD48128.1| farnesylated protein 1 [Hordeum vulg 51.2 3e-06 gi|21536659|gb|AAM60991.1| unknown [Arabidopsis thaliana] 50.8 3e-06 gi|6525011|gb|AAF15286.1|AF198627_1 copper chaperone homolog CCH 50.8 3e-06 gi|27754505|gb|AAO22700.1| putative copper chaperone (CCH) prote 50.8 3e-06 gi|18405728|ref|NP_564713.1| metal ion binding [Arabidopsis t... 50.8 3e-06 gi|30039180|gb|AAP06757.1| copper chaperone [Lycopersicon escule 50.4 4e-06 gi|115442573|ref|NP_001045566.1| Os01g0976300 [Oryza sativa (... 50.4 4e-06 gi|15237967|ref|NP_197247.1| metal ion binding [Arabidopsis t... 50.4 4e-06 gi|92893093|gb|ABE91607.1| Heavy metal transport/detoxificati... 50.1 6e-06 gi|92871662|gb|ABE80600.1| Heavy metal transport/detoxificati... 50.1 6e-06 gi|84468370|dbj|BAE71268.1| hypothetical protein [Trifolium prat 50.1 6e-06 gi|119367485|gb|ABL67657.1| putative copper chaperone [Citrus cv 49.7 8e-06 gi|115438140|ref|NP_001043467.1| Os01g0595100 [Oryza sativa (... 49.7 8e-06 gi|18408466|ref|NP_564870.1| metal ion binding [Arabidopsis t... 49.7 8e-06 gi|4097571|gb|AAD09514.1| GMFP5 [Glycine max] 49.7 8e-06 gi|48716353|dbj|BAD22964.1| heavy-metal-associated domain-con... 49.7 8e-06 gi|115475275|ref|NP_001061234.1| Os08g0205400 [Oryza sativa (... 49.7 8e-06 gi|20521308|dbj|BAB91822.1| unknown protein [Oryza sativa (ja... 49.7 8e-06 gi|10177126|dbj|BAB10416.1| atfp6-like protein [Arabidopsis t... 49.7 8e-06 gi|108863994|gb|ABG22362.1| heavy metal-associated domain con... 49.3 1e-05 gi|108862193|gb|ABA96467.2| heavy metal-associated domain con... 49.3 1e-05 gi|108708105|gb|ABF95900.1| heavy metal-associated domain con... 49.3 1e-05 gi|115484161|ref|NP_001065742.1| Os11g0147500 [Oryza sativa (... 49.3 1e-05 gi|108863995|gb|ABG22363.1| heavy metal-associated domain con... 49.3 1e-05 gi|115476344|ref|NP_001061768.1| Os08g0405700 [Oryza sativa (... 49.3 1e-05 gi|8927670|gb|AAF82161.1|AC068143_3 Contains similarity to a ... 48.9 1e-05 gi|15221451|ref|NP_172122.1| copper ion binding / metal ion bind 48.9 1e-05 gi|92899055|gb|ABE94521.1| Heavy metal transport/detoxificati... 48.5 2e-05 gi|115439611|ref|NP_001044085.1| Os01g0719600 [Oryza sativa (... 48.5 2e-05 gi|32442810|gb|AAN23108.2| putative farnesylated protein [Brassi 48.5 2e-05 gi|15228869|ref|NP_191183.1| CCH [Arabidopsis thaliana] >gi|1... 48.5 2e-05 gi|28866017|emb|CAD70172.1| farnesylated protein 2 [Hordeum vulg 48.1 2e-05 gi|15240371|ref|NP_198602.1| copper ion binding / metal ion b... 47.8 3e-05 gi|21554184|gb|AAM63263.1| unknown [Arabidopsis thaliana] 47.8 3e-05 gi|115456223|ref|NP_001051712.1| Os03g0819400 [Oryza sativa (... 47.8 3e-05 gi|18404191|ref|NP_566747.1| copper ion binding / metal ion b... 47.8 3e-05 gi|15219990|ref|NP_173712.1| metal ion binding [Arabidopsis t... 47.4 4e-05 gi|56202338|dbj|BAD73816.1| putative copper chaperone [Oryza ... 47.4 4e-05 gi|15223925|ref|NP_177261.1| metal ion binding [Arabidopsis t... 47.4 4e-05 gi|115436188|ref|NP_001042852.1| Os01g0309800 [Oryza sativa (... 47.4 4e-05 gi|115446477|ref|NP_001047018.1| Os02g0530100 [Oryza sativa (... 47.4 4e-05 gi|37651975|emb|CAE51321.1| chopper chaperone [Hordeum vulgare s 47.0 5e-05 gi|23092567|gb|AAN08440.1| hypothetical protein [Arabidopsis tha 47.0 5e-05 gi|30687119|ref|NP_181275.2| metal ion binding [Arabidopsis t... 47.0 5e-05 gi|15223663|ref|NP_176089.1| metal ion binding [Arabidopsis t... 45.8 1e-04
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 282 Number of extensions: 12 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 582 Length of database: 101054579 Length adjustment: 107 Effective length of query: 475 Effective length of database: 70736236 Effective search space: 6154052532 Effective search space used: 6154052532 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)