RID=1168939472-5384-81543264683.BLASTQ1, Contig243

Alignments
 

>gi|92874180|gb|ABE82485.1|  Histone deacetylase superfamily [Medicago truncatula]
Length=476

 Score =  437 bits (1124),  Expect = 2e-122
 Identities = 205/224 (91%), Positives = 215/224 (95%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHI+D 
Sbjct  176  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDT  235

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            GVG GK YALNVPLNDGMDDE+FR LF+PI+QKVM+VYQPDAVVLQCGADSLSGDRLGCF
Sbjct  236  GVGPGKDYALNVPLNDGMDDENFRALFRPIMQKVMDVYQPDAVVLQCGADSLSGDRLGCF  295

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLSVKGHADCLRFLRSFNVPLMVLGGGGYT+RNVARCWCYETAVAVGVEP NKLPYNEYY
Sbjct  296  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTVRNVARCWCYETAVAVGVEPSNKLPYNEYY  355

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGPDYTLHV P NMENLN P+DMEKIRNTLLEQ+++L HAPS
Sbjct  356  EYFGPDYTLHVEPNNMENLNTPKDMEKIRNTLLEQIARLPHAPS  399


>gi|15242626|ref|NP_201116.1|  HDA6 (HISTONE DEACETYLASE 6); histone deacetylase [Arabidopsis 
thaliana]
 gi|10177292|dbj|BAB10553.1|  histone deacetylase [Arabidopsis thaliana]
 gi|18176319|gb|AAL60022.1|  putative histone deacetylase [Arabidopsis thaliana]
 gi|21593886|gb|AAM65853.1|  histone deacetylase [Arabidopsis thaliana]
 gi|23296897|gb|AAN13198.1|  putative histone deacetylase [Arabidopsis thaliana]
Length=471

 Score =  427 bits (1099),  Expect = 1e-119
 Identities = 202/224 (90%), Positives = 213/224 (95%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVLGILELLK+ +RVLY+DIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV
Sbjct  167  DIVLGILELLKMFKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  226

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G   GK+YALNVPLNDGMDDESFR LF+P+IQKVMEVYQP+AVVLQCGADSLSGDRLGCF
Sbjct  227  GAEKGKYYALNVPLNDGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCF  286

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLSVKGHADCLRFLRS+NVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEY+
Sbjct  287  NLSVKGHADCLRFLRSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYF  346

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGPDYTLHV P  MENLN P+DME+IRNTLLEQLS L HAPS
Sbjct  347  EYFGPDYTLHVDPSPMENLNTPKDMERIRNTLLEQLSGLIHAPS  390


>gi|11066141|gb|AAG28475.1|AF195548_1  putative histone deacetylase [Arabidopsis thaliana]
Length=471

 Score =  424 bits (1091),  Expect = 1e-118
 Identities = 201/224 (89%), Positives = 212/224 (94%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVLGILELLK+ +RVLY+DIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV
Sbjct  167  DIVLGILELLKMFKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  226

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G   GK+YALNVPLNDGMDDESFR LF+P+IQKVMEVYQP+AVVLQCGADSLSGDRLGCF
Sbjct  227  GAEKGKYYALNVPLNDGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCF  286

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLSVKGHADCLRFLRS+NVPLMVLGG GYTIRNVARCWCYETAVAVGVEPDNKLPYNEY+
Sbjct  287  NLSVKGHADCLRFLRSYNVPLMVLGGEGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYF  346

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGPDYTLHV P  MENLN P+DME+IRNTLLEQLS L HAPS
Sbjct  347  EYFGPDYTLHVDPSPMENLNTPKDMERIRNTLLEQLSGLIHAPS  390


>gi|17017398|gb|AAL33653.1|AF440226_1  histone deacetylase [Zea mays]
Length=436

 Score =  405 bits (1041),  Expect = 7e-113
 Identities = 187/224 (83%), Positives = 206/224 (91%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVL ILELLK HRRVLYVDIDVHHGDGVEEAF+TT+RVMTVSFHK+GDFFPGTGHI DV
Sbjct  146  DIVLAILELLKFHRRVLYVDIDVHHGDGVEEAFFTTNRVMTVSFHKYGDFFPGTGHITDV  205

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G   GKHYALNVPL+DG+DD +FRGLFQ II+KVMEVYQPD VVLQCGADSL+GDRLGCF
Sbjct  206  GAAEGKHYALNVPLSDGIDDTTFRGLFQCIIKKVMEVYQPDVVVLQCGADSLAGDRLGCF  265

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLSVKGHADCLRFLRS+NVP+MVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYN+YY
Sbjct  266  NLSVKGHADCLRFLRSYNVPMMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNDYY  325

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGPDYTLH+ P ++ENLN  +D+E I+N +LE LSK+ H PS
Sbjct  326  EYFGPDYTLHIQPKSVENLNTTKDLENIKNMILENLSKIEHVPS  369


>gi|4193320|gb|AAD10139.1|  histone deacetylase [Zea mays]
Length=458

 Score =  405 bits (1041),  Expect = 7e-113
 Identities = 187/224 (83%), Positives = 206/224 (91%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVL ILELLK HRRVLYVDIDVHHGDGVEEAF+TT+RVMTVSFHK+GDFFPGTGHI DV
Sbjct  168  DIVLAILELLKFHRRVLYVDIDVHHGDGVEEAFFTTNRVMTVSFHKYGDFFPGTGHITDV  227

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G   GKHYALNVPL+DG+DD +FRGLFQ II+KVMEVYQPD VVLQCGADSL+GDRLGCF
Sbjct  228  GAAEGKHYALNVPLSDGIDDTTFRGLFQCIIKKVMEVYQPDVVVLQCGADSLAGDRLGCF  287

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLSVKGHADCLRFLRS+NVP+MVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYN+YY
Sbjct  288  NLSVKGHADCLRFLRSYNVPMMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNDYY  347

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGPDYTLH+ P ++ENLN  +D+E I+N +LE LSK+ H PS
Sbjct  348  EYFGPDYTLHIQPKSVENLNTTKDLENIKNMILENLSKIEHVPS  391


>gi|115476000|ref|NP_001061596.1|  Os08g0344100 [Oryza sativa (japonica cultivar-group)]
 gi|38637022|dbj|BAD03280.1|  putative histone deacetylase [Oryza sativa (japonica cultivar-group)]
 gi|113623565|dbj|BAF23510.1|  Os08g0344100 [Oryza sativa (japonica cultivar-group)]
Length=458

 Score =  399 bits (1025),  Expect = 5e-111
 Identities = 182/224 (81%), Positives = 206/224 (91%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVL ILELLK HRRVLYVDIDVHHGDGVEEAF+TT+RVMT SFHK+GDFFPGTGHI DV
Sbjct  168  DIVLAILELLKFHRRVLYVDIDVHHGDGVEEAFFTTNRVMTCSFHKYGDFFPGTGHITDV  227

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G G GKHYALNVPL+DG+DD++FR LFQ II+KVMEVYQPD VVLQCGADSL+GDRLGCF
Sbjct  228  GAGEGKHYALNVPLSDGIDDDTFRDLFQCIIKKVMEVYQPDVVVLQCGADSLAGDRLGCF  287

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLSVKGHADCLR+LRSFN+P+MVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYN+YY
Sbjct  288  NLSVKGHADCLRYLRSFNIPMMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNDYY  347

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGPDY LH+ P ++ENLN+ +D+E I++ +L+ LSK+ H PS
Sbjct  348  EYFGPDYNLHIQPRSVENLNSTKDLENIKSMILDHLSKIEHVPS  391


>gi|52548252|gb|AAU82113.1|  histone deacetylase [Triticum aestivum]
Length=458

 Score =  396 bits (1017),  Expect = 4e-110
 Identities = 181/224 (80%), Positives = 205/224 (91%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVL ILELLK HRRVLYVDIDVHHGDGVEEAF+TT+RVMTVSFHK+GDFFPGTGHI DV
Sbjct  168  DIVLAILELLKFHRRVLYVDIDVHHGDGVEEAFFTTNRVMTVSFHKYGDFFPGTGHITDV  227

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G G GKHYA+NVPL+DG+DD++FR LFQ II++VMEVYQP+ VVLQCGADSL+G+RLGCF
Sbjct  228  GAGEGKHYAVNVPLSDGIDDDTFRDLFQCIIKRVMEVYQPEVVVLQCGADSLAGNRLGCF  287

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLSVKGHADCLRFLRSFN+P+MVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYN+YY
Sbjct  288  NLSVKGHADCLRFLRSFNIPMMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNDYY  347

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGPDY LH+ P  +ENLN  +D+E I+N +L+ LSKL H P+
Sbjct  348  EYFGPDYNLHIQPRIVENLNTTKDLENIKNMILDHLSKLEHVPN  391


>gi|11066139|gb|AAG28474.1|AF195547_1  putative histone deacetylase [Arabidopsis thaliana]
 gi|2318131|gb|AAB66486.1|  histone deacetylase [Arabidopsis thaliana]
Length=501

 Score =  379 bits (974),  Expect = 4e-105
 Identities = 173/224 (77%), Positives = 204/224 (91%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVL ILELLK H RVLYVDID+HHGDGVEEAFY TDRVMTVSFHKFGD+FPGTGHI+D+
Sbjct  163  DIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDI  222

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G G+GK+Y+LNVPL+DG+DDES+  LF+PI+ KVME+++P AVVLQCGADSLSGDRLGCF
Sbjct  223  GYGSGKYYSLNVPLDDGIDDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCF  282

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLS+KGHA+C++F+RSFNVPL++LGGGGYTIRNVARCWCYET VA+GVE ++K+P +EYY
Sbjct  283  NLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEHEYY  342

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGPDYTLHVAP NMEN N+ + +E+IRN LL  LSKL HAPS
Sbjct  343  EYFGPDYTLHVAPSNMENKNSRQMLEEIRNDLLHNLSKLQHAPS  386


>gi|15233694|ref|NP_195526.1|  HD1; histone deacetylase [Arabidopsis thaliana]
 gi|21431761|sp|O22446|HDAC_ARATH  Histone deacetylase (HD)
 gi|4467119|emb|CAB37553.1|  Histone deacetylase [Arabidopsis thaliana]
 gi|7270797|emb|CAB80478.1|  Histone deacetylase [Arabidopsis thaliana]
 gi|20260508|gb|AAM13152.1|  histone deacetylase [Arabidopsis thaliana]
 gi|31711912|gb|AAP68312.1|  At4g38130 [Arabidopsis thaliana]
 gi|110740878|dbj|BAE98535.1|  Histone deacetylase [Arabidopsis thaliana]
Length=501

 Score =  379 bits (974),  Expect = 4e-105
 Identities = 173/224 (77%), Positives = 204/224 (91%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVL ILELLK H RVLYVDID+HHGDGVEEAFY TDRVMTVSFHKFGD+FPGTGHI+D+
Sbjct  163  DIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDI  222

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G G+GK+Y+LNVPL+DG+DDES+  LF+PI+ KVME+++P AVVLQCGADSLSGDRLGCF
Sbjct  223  GYGSGKYYSLNVPLDDGIDDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCF  282

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLS+KGHA+C++F+RSFNVPL++LGGGGYTIRNVARCWCYET VA+GVE ++K+P +EYY
Sbjct  283  NLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEHEYY  342

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGPDYTLHVAP NMEN N+ + +E+IRN LL  LSKL HAPS
Sbjct  343  EYFGPDYTLHVAPSNMENKNSRQMLEEIRNDLLHNLSKLQHAPS  386


>gi|14550104|gb|AAK67142.1|AF384032_1  histone deacetylase HDA101 [Zea mays]
Length=517

 Score =  379 bits (972),  Expect = 7e-105
 Identities = 173/224 (77%), Positives = 202/224 (90%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVL ILELLK H RVLYVDID+HHGDGVEEAFYTTDRVMTVSFHKFGD+FPGTG IRD+
Sbjct  168  DIVLAILELLKHHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDI  227

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G   GK+Y+LNVPL+DG+DDES++ LF+PI+ KVMEV++P AVVLQCGADSLSGDRLGCF
Sbjct  228  GHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCF  287

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLS+KGHA+C+R++RSFNVPL++LGGGGYTIRNVARCWCYET VA+G EP++K+P NEYY
Sbjct  288  NLSIKGHAECVRYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGQEPEDKMPVNEYY  347

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGPDYTLHVAP NMEN N  + ++ IR+ LL+ LSKL HAPS
Sbjct  348  EYFGPDYTLHVAPSNMENKNTRQQLDDIRSKLLDNLSKLRHAPS  391


>gi|92868424|gb|ABE78429.1|  Histone deacetylase superfamily [Medicago truncatula]
Length=417

 Score =  375 bits (964),  Expect = 6e-104
 Identities = 171/224 (76%), Positives = 201/224 (89%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVL ILELLK H RVLYVDID+HHGDGVEEAFYTTDRVMTVSFHKFGD+FPGTG +RD+
Sbjct  164  DIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDLRDI  223

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G G GK+Y+LNVPL+DG+DDES+  LF+P+I KVME+++P AVVLQCGADSLSGDRLGCF
Sbjct  224  GYGKGKYYSLNVPLDDGIDDESYHLLFKPLICKVMEIFRPGAVVLQCGADSLSGDRLGCF  283

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLS++GHA+C+R++RSFNVPL++LGGGGYTIRNVARCWCYET VA+G+E D+K+P +EYY
Sbjct  284  NLSIRGHAECVRYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPEHEYY  343

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGPDYTLHVAP NMEN N    ++ IR+ LLE LSKL HAPS
Sbjct  344  EYFGPDYTLHVAPSNMENKNTRHLLDNIRSKLLENLSKLQHAPS  387


>gi|109716220|gb|ABG43092.1|  histone deacetylase HDAC3 [Triticum aestivum]
Length=519

 Score =  372 bits (955),  Expect = 7e-103
 Identities = 169/224 (75%), Positives = 201/224 (89%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVL ILELLK H+RVLYVDID+HHGDGVEEAFYTTDRVMTVSFHKFGD+FPGTG +RD+
Sbjct  168  DIVLAILELLKHHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDI  227

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G   GK+Y+LNVPL+DG+DDES++ LF+PI+ KVMEV+QP AVVLQCGADSLSGDRLGCF
Sbjct  228  GHSKGKYYSLNVPLDDGIDDESYQSLFKPIMAKVMEVFQPGAVVLQCGADSLSGDRLGCF  287

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLS++GHA+C++++RSF+VPL++LGGGGYTIRNVARCWCYET VA+G E ++K+P NEYY
Sbjct  288  NLSIRGHAECVKYMRSFSVPLLLLGGGGYTIRNVARCWCYETGVALGQELEDKMPVNEYY  347

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGPDYTLHVAP NMEN N   +++ IR  LL+ LSKL HAPS
Sbjct  348  EYFGPDYTLHVAPSNMENKNTRYELDNIRTKLLDNLSKLRHAPS  391


>gi|55296517|dbj|BAD68731.1|  putative histone deacetylase HDAC1 [Oryza sativa (japonica cultivar-group)]
Length=460

 Score =  372 bits (955),  Expect = 7e-103
 Identities = 171/224 (76%), Positives = 201/224 (89%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVL ILELLK H+RVLYVDID+HHGDGVEEAFYTTDRVMTVSFHKFGD+FPGTG IRD+
Sbjct  167  DIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDI  226

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G   GK+Y+LNVPL+DG+DDES++ LF+PI+ KVMEV++P AVVLQCGADSLSGDRLGCF
Sbjct  227  GHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCF  286

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLS++GHA+C+RF+RSFNVPL++LGGGGYTIRNVARCWCYET VA+G E  +K+P NEY+
Sbjct  287  NLSIRGHAECVRFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGHELTDKMPPNEYF  346

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGPDYTLHVAP NMEN N  + ++ IR+ LL+ LSKL HAPS
Sbjct  347  EYFGPDYTLHVAPSNMENKNTRQQLDDIRSRLLDNLSKLRHAPS  390


>gi|115468688|ref|NP_001057943.1|  Os06g0583400 [Oryza sativa (japonica cultivar-group)]
 gi|31324093|gb|AAP47171.1|  histone deacetylase HDAC1 [Oryza sativa (japonica cultivar-group)]
 gi|55296516|dbj|BAD68730.1|  histone deacetylase HDAC1 [Oryza sativa (japonica cultivar-group)]
 gi|113595983|dbj|BAF19857.1|  Os06g0583400 [Oryza sativa (japonica cultivar-group)]
Length=518

 Score =  372 bits (955),  Expect = 7e-103
 Identities = 171/224 (76%), Positives = 201/224 (89%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVL ILELLK H+RVLYVDID+HHGDGVEEAFYTTDRVMTVSFHKFGD+FPGTG IRD+
Sbjct  167  DIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDI  226

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G   GK+Y+LNVPL+DG+DDES++ LF+PI+ KVMEV++P AVVLQCGADSLSGDRLGCF
Sbjct  227  GHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCF  286

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLS++GHA+C+RF+RSFNVPL++LGGGGYTIRNVARCWCYET VA+G E  +K+P NEY+
Sbjct  287  NLSIRGHAECVRFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGHELTDKMPPNEYF  346

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGPDYTLHVAP NMEN N  + ++ IR+ LL+ LSKL HAPS
Sbjct  347  EYFGPDYTLHVAPSNMENKNTRQQLDDIRSRLLDNLSKLRHAPS  390


>gi|3023947|sp|P56521|HDAC_MAIZE  Probable histone deacetylase (RPD3 homolog)
 gi|2665840|gb|AAC50038.1|  putative histone deacetylase RPD3 [Zea mays]
Length=513

 Score =  370 bits (949),  Expect = 3e-102
 Identities = 171/224 (76%), Positives = 200/224 (89%), Gaps = 4/224 (1%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVL ILELLK H RVLYVDID+HHGDGVEEAFYTTDRVMTVSFHKFGD+FPGTG IRD+
Sbjct  168  DIVLAILELLKHHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDI  227

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G   GK+Y+LNVPL+DG+DDES++ LF+PI+ KVMEV++P AVVLQCGADSLSGDRLGCF
Sbjct  228  GHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCF  287

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLS+KGHA+C+R++RSFNVPL++LGGGGYTIRNVARCWCYET VA+G EP++K+P NEYY
Sbjct  288  NLSIKGHAECVRYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGQEPEDKMPVNEYY  347

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGPDYTLHVAP NMEN N  + ++ IR+    +LSKL HAPS
Sbjct  348  EYFGPDYTLHVAPSNMENKNTRQQLDDIRS----KLSKLRHAPS  387


>gi|115445009|ref|NP_001046284.1|  Os02g0214900 [Oryza sativa (japonica cultivar-group)]
 gi|31324097|gb|AAP47173.1|  histone deacetylase HDAC3 [Oryza sativa (japonica cultivar-group)]
 gi|49387950|dbj|BAD25048.1|  histone deacetylase HDAC3 [Oryza sativa (japonica cultivar-group)]
 gi|113535815|dbj|BAF08198.1|  Os02g0214900 [Oryza sativa (japonica cultivar-group)]
Length=510

 Score =  366 bits (940),  Expect = 4e-101
 Identities = 166/224 (74%), Positives = 198/224 (88%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVL ILELLK+H RVLY+DID+HHGDGVEEAFYTT+RVMTVSFHKFGD+FPGTG IRD+
Sbjct  172  DIVLAILELLKLHERVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKFGDYFPGTGDIRDI  231

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G   GK+Y LNVPL+DG+DD+S++ +F+PII KVME+Y+P AVVLQCGADSLSGDRLGCF
Sbjct  232  GYSEGKYYCLNVPLDDGIDDDSYQSIFKPIISKVMEMYRPGAVVLQCGADSLSGDRLGCF  291

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLS KGHA+C++F+RSFNVPL++LGGGGYTIRNVARCWCYET VA+G E   KLPYNEYY
Sbjct  292  NLSGKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGEELQEKLPYNEYY  351

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGP+Y+L+VA  NMEN N  + +E+I+  +L+ LSKL HAPS
Sbjct  352  EYFGPEYSLYVAASNMENRNTNKQLEEIKCNILDNLSKLQHAPS  395


>gi|115445015|ref|NP_001046287.1|  Os02g0215200 [Oryza sativa (japonica cultivar-group)]
 gi|113535818|dbj|BAF08201.1|  Os02g0215200 [Oryza sativa (japonica cultivar-group)]
Length=400

 Score =  365 bits (938),  Expect = 6e-101
 Identities = 166/224 (74%), Positives = 198/224 (88%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVL ILELLK+H RVLY+DID+HHGDGVEEAFYTT+RVMTVSFHKFGD+FPGTG IRD+
Sbjct  63   DIVLAILELLKLHERVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKFGDYFPGTGDIRDI  122

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G   GK+Y LNVPL+DG+DD+S++ +F+PII KVME+Y+P AVVLQCGADSLSGDRLGCF
Sbjct  123  GYSEGKYYCLNVPLDDGIDDDSYQSIFKPIISKVMEMYRPGAVVLQCGADSLSGDRLGCF  182

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLS KGHA+C++F+RSFNVPL++LGGGGYTIRNVARCWCYET VA+G E   KLPYNEYY
Sbjct  183  NLSGKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGEELREKLPYNEYY  242

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGP+Y+L+VA  NMEN N  + +E+I+  +L+ LSKL HAPS
Sbjct  243  EYFGPEYSLYVAASNMENRNTNKQLEEIKCNILDNLSKLQHAPS  286


>gi|31324095|gb|AAP47172.1|  histone deacetylase HDAC2 [Oryza sativa (japonica cultivar-group)]
Length=498

 Score =  365 bits (938),  Expect = 6e-101
 Identities = 166/224 (74%), Positives = 198/224 (88%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVL ILELLK+H RVLY+DID+HHGDGVEEAFYTT+RVMTVSFHKFGD+FPGTG IRD+
Sbjct  172  DIVLAILELLKLHERVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKFGDYFPGTGDIRDI  231

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G   GK+Y LNVPL+DG+DD+S++ +F+PII KVME+Y+P AVVLQCGADSLSGDRLGCF
Sbjct  232  GYSEGKYYCLNVPLDDGIDDDSYQSIFKPIISKVMEMYRPGAVVLQCGADSLSGDRLGCF  291

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLS KGHA+C++F+RSFNVPL++LGGGGYTIRNVARCWCYET VA+G E   KLPYNEYY
Sbjct  292  NLSGKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGEELREKLPYNEYY  351

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGP+Y+L+VA  NMEN N  + +E+I+  +L+ LSKL HAPS
Sbjct  352  EYFGPEYSLYVAASNMENRNTNKQLEEIKCNILDNLSKLQHAPS  395


>gi|46805201|dbj|BAD17681.1|  putative histone deacetylase HDAC3 [Oryza sativa (japonica cultivar-group)]
 gi|49387953|dbj|BAD25051.1|  putative histone deacetylase HDAC3 [Oryza sativa (japonica cultivar-group)]
Length=509

 Score =  365 bits (938),  Expect = 6e-101
 Identities = 166/224 (74%), Positives = 198/224 (88%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVL ILELLK+H RVLY+DID+HHGDGVEEAFYTT+RVMTVSFHKFGD+FPGTG IRD+
Sbjct  172  DIVLAILELLKLHERVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKFGDYFPGTGDIRDI  231

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G   GK+Y LNVPL+DG+DD+S++ +F+PII KVME+Y+P AVVLQCGADSLSGDRLGCF
Sbjct  232  GYSEGKYYCLNVPLDDGIDDDSYQSIFKPIISKVMEMYRPGAVVLQCGADSLSGDRLGCF  291

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLS KGHA+C++F+RSFNVPL++LGGGGYTIRNVARCWCYET VA+G E   KLPYNEYY
Sbjct  292  NLSGKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGEELREKLPYNEYY  351

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGP+Y+L+VA  NMEN N  + +E+I+  +L+ LSKL HAPS
Sbjct  352  EYFGPEYSLYVAASNMENRNTNKQLEEIKCNILDNLSKLQHAPS  395


>gi|12698880|gb|AAK01712.1|AF332875_1  histone deacetylase HD1 [Oryza sativa]
Length=493

 Score =  358 bits (920),  Expect = 8e-99
 Identities = 164/224 (73%), Positives = 196/224 (87%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVL ILELLK H+RVLYVDID+HHGDGVEEAFYTTDRVMTVSFHKFGD+FPGTG IRD+
Sbjct  167  DIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDI  226

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G   GK+Y LNVPL+DG+DD+S++ +F+PII KVME+Y+P AVVLQCGADSLSGDRLGCF
Sbjct  227  GYSEGKYYCLNVPLDDGIDDDSYQSIFKPIISKVMEMYRPGAVVLQCGADSLSGDRLGCF  286

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLS KGHA+C++F+RSFNVPL++LGGGGY IRNVARCWCYET VA+G E  +K+P NEY+
Sbjct  287  NLSGKGHAECVKFMRSFNVPLLLLGGGGYAIRNVARCWCYETGVALGHELTDKMPPNEYF  346

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGP+Y+L VA  NMEN N  + +E+I+  +L+ LSKL HAPS
Sbjct  347  EYFGPEYSLFVAASNMENRNTNKQLEEIKCNILDNLSKLQHAPS  390


>gi|9022439|gb|AAF82385.1|  histone deacetylase [Mesembryanthemum crystallinum]
Length=500

 Score =  355 bits (912),  Expect = 7e-98
 Identities = 164/224 (73%), Positives = 195/224 (87%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVL ILELLKVH RVLYVDID+HHGDGVEEAFYTT+RVMTVSFHKFGD+FPGT     +
Sbjct  163  DIVLAILELLKVHERVLYVDIDIHHGDGVEEAFYTTERVMTVSFHKFGDYFPGTETFVYI  222

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G G GK+Y+LNVPL+DG+DDES++ LF+PI+ KVME+++P AVVLQCGADSLSGDRLGCF
Sbjct  223  GYGKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEIFKPGAVVLQCGADSLSGDRLGCF  282

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLS+KGHA+C++++ SFNVPL+++GGGGYTIR VARCWCYET VA+G E D+K+P +EYY
Sbjct  283  NLSIKGHAECVKYMISFNVPLLLVGGGGYTIRYVARCWCYETGVALGFELDDKIPQHEYY  342

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGPDYTLHVAP NMEN N+   ++ IR  LLE LS L HAPS
Sbjct  343  EYFGPDYTLHVAPSNMENKNSRPMLDDIRGKLLEYLSSLQHAPS  386


>gi|119358878|emb|CAL52346.2|  Hda2 histone deacetylase (IC) [Ostreococcus tauri]
Length=482

 Score =  329 bits (843),  Expect = 7e-90
 Identities = 152/224 (67%), Positives = 185/224 (82%), Gaps = 0/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            DIVL ILELLK H+RVLY+DID+HHGDGVEEAFYTTDRVMTVSFHKFG++FPGTGH++DV
Sbjct  149  DIVLAILELLKEHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKFGEYFPGTGHLQDV  208

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G   GK+Y++NVPL DG+DDES+  L++P++ KVMEVYQPDA+V Q GADSLSGDRLGCF
Sbjct  209  GQHAGKYYSMNVPLKDGIDDESYELLYKPLMSKVMEVYQPDAIVFQSGADSLSGDRLGCF  268

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLS+KGHA+CL+++ SFNVPL+VLGGGGYTIRNVARCW YET   +  +  + +P N+Y 
Sbjct  269  NLSIKGHAECLKYMTSFNVPLLVLGGGGYTIRNVARCWAYETGCLLERDLADCMPQNDYS  328

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            EYFGP +TLH+   NMEN N    +E +R  LLE LSK+   PS
Sbjct  329  EYFGPTHTLHIQTSNMENQNTHEYLEGVRAHLLENLSKMMCRPS  372


>gi|17017402|gb|AAL33655.1|AF440228_1  histone deacetylase [Zea mays]
Length=430

 Score =  308 bits (788),  Expect = 2e-83
 Identities = 144/224 (64%), Positives = 176/224 (78%), Gaps = 1/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHIRD  498
            D+VLGILELLK H RVLY+DIDVHHGDGVEEAFY TDRVMTVSFHK+GD FFPGTG I+D
Sbjct  151  DLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDLFFPGTGDIKD  210

Query  497  VGVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGC  318
            +G   GK+YA+N+PL DG+DD SF  LF+ II KV+E Y P A+VLQCGADSL+ DRLGC
Sbjct  211  IGEREGKYYAINIPLKDGIDDTSFTRLFKTIIAKVVETYLPGAIVLQCGADSLARDRLGC  270

Query  317  FNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEY  138
            FNLS++GHA+C++F++ FN+PL+V GGGGYT  NVARCW  ET V +  E  N++P NEY
Sbjct  271  FNLSIEGHAECVKFVKKFNIPLLVTGGGGYTKENVARCWAVETGVLLDTELPNEIPKNEY  330

Query  137  YEYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAP  6
             EYF PDYTL V   NM+NLN+   +  I+  ++E L  + HAP
Sbjct  331  IEYFAPDYTLKVPNLNMDNLNSKTYLSSIKVQVMESLRYIQHAP  374


>gi|116309428|emb|CAH66503.1|  H0321H01.12 [Oryza sativa (indica cultivar-group)]
Length=430

 Score =  306 bits (783),  Expect = 6e-83
 Identities = 141/224 (62%), Positives = 176/224 (78%), Gaps = 1/224 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFF-PGTGHIRD  498
            D+VLGILELLK H RVLY+DIDVHHGDGVEEAFY TDRVMTVSFHK+GDFF PGTG I+D
Sbjct  151  DLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDFFFPGTGDIKD  210

Query  497  VGVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGC  318
            +G   GK+YA+N+PL DG+DD  F  LF+ +I KV+E Y P A+VLQCGADSL+ DRLGC
Sbjct  211  IGEREGKYYAINIPLKDGIDDSGFTRLFKTVIAKVVETYLPGAIVLQCGADSLARDRLGC  270

Query  317  FNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEY  138
            FNLS++GHA+C++F++ FN+PL+V GGGGYT  NVARCW  ET V +  E  N++P NEY
Sbjct  271  FNLSIEGHAECVKFVKKFNIPLLVTGGGGYTKENVARCWAVETGVLLDTELPNEIPDNEY  330

Query  137  YEYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAP  6
             +YF PDYTL V+  NM+NLN+   +  I+  ++E L  + HAP
Sbjct  331  IKYFAPDYTLKVSNVNMDNLNSKSYLSSIKVQVMESLRAIQHAP  374


>gi|30692236|ref|NP_190054.2|  HDA9; histone deacetylase [Arabidopsis thaliana]
 gi|25082914|gb|AAN72014.1|  putative protein [Arabidopsis thaliana]
 gi|30387509|gb|AAP31920.1|  At3g44680 [Arabidopsis thaliana]
Length=426

 Score =  305 bits (781),  Expect = 1e-82
 Identities = 141/225 (62%), Positives = 177/225 (78%), Gaps = 1/225 (0%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHIRD  498
            D+VLGILELLK H RVLY+DIDVHHGDGVEEAFY TDRVMTVSFHKFGD FFPGTG +++
Sbjct  151  DLVLGILELLKHHPRVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDKFFPGTGDVKE  210

Query  497  VGVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGC  318
            +G   GK YA+NVPL DG+DD SF  LF+ II KV+E+YQP A+VLQCGADSL+ DRLGC
Sbjct  211  IGEREGKFYAINVPLKDGIDDSSFNRLFRTIISKVVEIYQPGAIVLQCGADSLARDRLGC  270

Query  317  FNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEY  138
            FNLS+ GHA+C++F++ FN+PL+V GGGGYT  NVARCW  ET + +  E  N++P N+Y
Sbjct  271  FNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENDY  330

Query  137  YEYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
             +YF PD++L +  G++ENLN    +  I+  +LE L  + HAPS
Sbjct  331  IKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPS  375


>gi|116831537|gb|ABK28721.1|  unknown [Arabidopsis thaliana]
Length=410

 Score =  301 bits (772),  Expect = 1e-81
 Identities = 143/224 (63%), Positives = 173/224 (77%), Gaps = 4/224 (1%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            D+VL ILELLK  +RVLY++I   HGD VEEAF  TDRVMTVSFHK GD    TG I D 
Sbjct  162  DVVLAILELLKSFKRVLYIEIGFPHGDEVEEAFKDTDRVMTVSFHKVGD----TGDISDY  217

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G G G++Y+LN PL DG+DD S RGLF P+I + ME+Y+P+ +VLQCGADSL+GD  G F
Sbjct  218  GEGKGQYYSLNAPLKDGLDDFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTF  277

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLS+KGH DCL+++RSFNVPLM+LGGGGYT+ NVARCWCYETA+AVG + DN LP N+Y 
Sbjct  278  NLSIKGHGDCLQYVRSFNVPLMILGGGGYTLPNVARCWCYETAIAVGEQLDNDLPGNDYM  337

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            +YF PDY LH+ P N +NLN   D+  +R TLL QLS + HAPS
Sbjct  338  KYFRPDYKLHILPTNRQNLNTRLDIITMRETLLAQLSLVMHAPS  381


>gi|15238556|ref|NP_198410.1|  histone deacetylase [Arabidopsis thaliana]
 gi|10176806|dbj|BAB09994.1|  histone deacetylase [Arabidopsis thaliana]
 gi|21360986|gb|AAM49768.1|  HDA7 [Arabidopsis thaliana]
 gi|91806930|gb|ABE66192.1|  histone deacetylase [Arabidopsis thaliana]
Length=409

 Score =  301 bits (772),  Expect = 1e-81
 Identities = 143/224 (63%), Positives = 173/224 (77%), Gaps = 4/224 (1%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDV  495
            D+VL ILELLK  +RVLY++I   HGD VEEAF  TDRVMTVSFHK GD    TG I D 
Sbjct  162  DVVLAILELLKSFKRVLYIEIGFPHGDEVEEAFKDTDRVMTVSFHKVGD----TGDISDY  217

Query  494  GVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF  315
            G G G++Y+LN PL DG+DD S RGLF P+I + ME+Y+P+ +VLQCGADSL+GD  G F
Sbjct  218  GEGKGQYYSLNAPLKDGLDDFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTF  277

Query  314  NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYY  135
            NLS+KGH DCL+++RSFNVPLM+LGGGGYT+ NVARCWCYETA+AVG + DN LP N+Y 
Sbjct  278  NLSIKGHGDCLQYVRSFNVPLMILGGGGYTLPNVARCWCYETAIAVGEQLDNDLPGNDYM  337

Query  134  EYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            +YF PDY LH+ P N +NLN   D+  +R TLL QLS + HAPS
Sbjct  338  KYFRPDYKLHILPTNRQNLNTRLDIITMRETLLAQLSLVMHAPS  381


>gi|46805203|dbj|BAD17683.1|  putative histone deacetylase HDAC3 [Oryza sativa (japonica cultivar-group)]
 gi|49387955|dbj|BAD25053.1|  putative histone deacetylase HDAC3 [Oryza sativa (japonica cultivar-group)]
Length=299

 Score =  296 bits (758),  Expect = 5e-80
 Identities = 133/185 (71%), Positives = 161/185 (87%), Gaps = 0/185 (0%)
 Frame = -3

Query  557  MTVSFHKFGDFFPGTGHIRDVGVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQ  378
            MTVSFHKFGD+FPGTG IRD+G   GK+Y LNVPL+DG+DD+S++ +F+PII KVME+Y+
Sbjct  1    MTVSFHKFGDYFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKPIISKVMEMYR  60

Query  377  PDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWC  198
            P AVVLQCGADSLSGDRLGCFNLS KGHA+C++F+RSFNVPL++LGGGGYTIRNVARCWC
Sbjct  61   PGAVVLQCGADSLSGDRLGCFNLSGKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWC  120

Query  197  YETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKL  18
            YET VA+G E   KLPYNEYYEYFGP+Y+L+VA  NMEN N  + +E+I+  +L+ LSKL
Sbjct  121  YETGVALGEELREKLPYNEYYEYFGPEYSLYVAASNMENRNTNKQLEEIKCNILDNLSKL  180

Query  17   SHAPS  3
             HAPS
Sbjct  181  QHAPS  185


>gi|6967116|emb|CAB72470.1|  putative protein [Arabidopsis thaliana]
Length=419

 Score =  295 bits (754),  Expect = 1e-79
 Identities = 137/225 (60%), Positives = 174/225 (77%), Gaps = 5/225 (2%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHIRD  498
            D+VLGILELLK H RVLY+DIDVHHGDGVEEAFY TDRVMTVSFHKFGD FFPGTG +++
Sbjct  148  DLVLGILELLKHHPRVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDKFFPGTGDVKE  207

Query  497  VGVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGC  318
            +G   GK YA+NVPL DG+DD SF  LF+ ++    E+YQP A+VLQCGADSL+ DRLGC
Sbjct  208  IGEREGKFYAINVPLKDGIDDSSFNRLFRTVV----EIYQPGAIVLQCGADSLARDRLGC  263

Query  317  FNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEY  138
            FNLS+ GHA+C++F++ FN+PL+V GGGGYT  NVARCW  ET + +  E  N++P N+Y
Sbjct  264  FNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENDY  323

Query  137  YEYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
             +YF PD++L +  G++ENLN    +  I+  +LE L  + HAPS
Sbjct  324  IKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPS  368


>gi|116061490|emb|CAL52208.1|  Histone deacetylase complex, catalytic component RPD3 (ISS) [Ostreococcus 
tauri]
Length=413

 Score =  286 bits (733),  Expect = 4e-77
 Identities = 138/228 (60%), Positives = 178/228 (78%), Gaps = 4/228 (1%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHIRD  498
            D+VL ILELLK H RVLY+DID+HHGDGVEEAFY TDRVMTVSFHK+GD FFPGTG +RD
Sbjct  142  DLVLAILELLKHHARVLYIDIDIHHGDGVEEAFYVTDRVMTVSFHKYGDMFFPGTGGLRD  201

Query  497  VGVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGC  318
            +G+ +GK+Y++NVPLNDG+DD+ F  LF+ ++Q VM+V+QP A+VLQCGADSL+GDR+GC
Sbjct  202  IGINSGKYYSVNVPLNDGIDDKIFVDLFKFVVQDVMDVFQPGAIVLQCGADSLAGDRIGC  261

Query  317  FNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNE-  141
            FN+S+KGHA+C+ F+ SF  P++V GGGGYT  NVARCW  ETA  +G +    +PY+E 
Sbjct  262  FNISLKGHAECVSFVNSFKKPMLVTGGGGYTKSNVARCWANETATLLGRKLAEDIPYHEN  321

Query  140  YYEYFGP-DYTLHV-APGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            YYEY+    Y L   AP  +ENLN P  + +++  + E L  L+HAPS
Sbjct  322  YYEYYADVAYKLRAYAPVWIENLNTPSYITQLKAQVRENLRSLTHAPS  369


>gi|118562908|dbj|BAF37798.1|  hypothetical protein [Ipomoea trifida]
Length=496

 Score =  286 bits (731),  Expect = 6e-77
 Identities = 144/276 (52%), Positives = 179/276 (64%), Gaps = 52/276 (18%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHIRD  498
            D+VLGILELLK H RVLY+DIDVHHGDGVEEAFY TDRVMTVSFHK+GD FFPGTG ++D
Sbjct  166  DLVLGILELLKYHPRVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDKFFPGTGDMKD  225

Query  497  VGVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGC  318
            +G  +GK YA+NVP  DG+DD SF  LF+ II KV+E Y P A+VLQCGADSL+GDRLGC
Sbjct  226  IGERDGKFYAINVPFKDGIDDSSFIRLFRTIISKVVETYIPGAIVLQCGADSLAGDRLGC  285

Query  317  FNLSV---------------------------------------------------KGHA  291
            FNLS+                                                    GHA
Sbjct  286  FNLSIDGASLLVIKVLFGHHSTFCKDISVVYLFPSTNLSCNFLGDFYMGMFYLMLLAGHA  345

Query  290  DCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYT  111
            +C+RF++ FN+PL+V GGGGYT  NVARCW YET + +  E  N++P N+Y +YFGPDY+
Sbjct  346  ECVRFVKKFNIPLLVTGGGGYTKENVARCWTYETGILLDSELPNEIPDNDYIKYFGPDYS  405

Query  110  LHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
            L +  G++ENLN+   +  I+  +LE L  + HAPS
Sbjct  406  LKIPGGHIENLNSKSYLGTIKTHVLENLRYIQHAPS  441


>gi|115458250|ref|NP_001052725.1|  Os04g0409600 [Oryza sativa (japonica cultivar-group)]
 gi|113564296|dbj|BAF14639.1|  Os04g0409600 [Oryza sativa (japonica cultivar-group)]
Length=309

 Score =  283 bits (725),  Expect = 3e-76
 Identities = 129/210 (61%), Positives = 164/210 (78%), Gaps = 1/210 (0%)
 Frame = -3

Query  632  RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFF-PGTGHIRDVGVGNGKHYALNVP  456
            +VLY+DIDVHHGDGVEEAFY TDRVMTVSFHK+GDFF PGTG I+D+G   GK+YA+N+P
Sbjct  44   QVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDFFFPGTGDIKDIGEREGKYYAINIP  103

Query  455  LNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRF  276
            L DG+DD  F  LF+ +I KV+E Y P A+VLQCGADSL+ DRLGCFNLS++GHA+C++F
Sbjct  104  LKDGIDDSGFTRLFKTVIAKVVETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAECVKF  163

Query  275  LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVAP  96
            ++ FN+PL+V GGGGYT  NVARCW  ET V +  E  N++P NEY +YF PDYTL V+ 
Sbjct  164  VKKFNIPLLVTGGGGYTKENVARCWAVETGVLLDTELPNEIPDNEYIKYFAPDYTLKVSN  223

Query  95   GNMENLNAPRDMEKIRNTLLEQLSKLSHAP  6
             NM+NLN+   +  I+  ++E L  + HAP
Sbjct  224  VNMDNLNSKSYLSSIKVQVMESLRAIQHAP  253


>gi|92888010|gb|ABE89136.1|  Histone deacetylase superfamily [Medicago truncatula]
Length=393

 Score =  267 bits (682),  Expect = 3e-71
 Identities = 133/225 (59%), Positives = 161/225 (71%), Gaps = 13/225 (5%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHIRD  498
            D+VLGILELLK H RVLY+DIDVHHGDGVEEAFY TDRVMTVS HK+GD FFPGTG  ++
Sbjct  126  DLVLGILELLKHHPRVLYIDIDVHHGDGVEEAFYFTDRVMTVSSHKYGDLFFPGTGDAKE  185

Query  497  VGVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGC  318
            +G   GK YA+NVPL DG+DD SF  LF+ II KV+E YQP A+VLQCGADSL+GDRLGC
Sbjct  186  IGEREGKFYAINVPLKDGIDDSSFTRLFKTIISKVVETYQPGAIVLQCGADSLAGDRLGC  245

Query  317  FNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEY  138
            FNLS+ G                V GGGGYT  NVARCW  ET V +  E  N++P N+Y
Sbjct  246  FNLSIDG------------AYFPVTGGGGYTKENVARCWTVETGVLLDTELPNEIPENDY  293

Query  137  YEYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
             +YFGPD++L +  G +ENLN+   +  I+  ++E L  + HAPS
Sbjct  294  IKYFGPDFSLKIPNGFIENLNSKSYLSTIKMQVMENLRCIQHAPS  338


>gi|45935150|gb|AAS79608.1|  putative histone deacetylase [Ipomoea trifida]
Length=438

 Score =  251 bits (642),  Expect = 1e-66
 Identities = 130/238 (54%), Positives = 160/238 (67%), Gaps = 42/238 (17%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHIRD  498
            D+VLGILELLK H RVLY+DIDVHHGDGVEEAFY TDRVMTVSFHK+GD FFPGTG ++D
Sbjct  151  DLVLGILELLKYHPRVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDKFFPGTGDMKD  210

Query  497  VGVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGC  318
            +G  +GK YA+NVP  DG+DD SF  LF+ II KV+E Y P A+VLQCGADSL+GDRL  
Sbjct  211  IGERDGKFYAINVPFKDGIDDSSFIRLFRTIISKVVETYIPGAIVLQCGADSLAGDRLVL  270

Query  317  F-------------------NLS----------------VKGHADCLRFLRSFNVPLMVL  243
            F                   NLS                + GHA+C+RF++ FN+PL+V 
Sbjct  271  FGHHSTFCKDISVVYLFPSTNLSCNFLGDFYMGMFYLMLLAGHAECVRFVKKFNIPLLVT  330

Query  242  GGGGYTIRNVARCWCYETAVAVGVEPDN------KLPYNEYYEYFGPDYTLHVAPGNM  87
            GGGGYT  NVARCW YET + +  E  N      ++P N+Y +YFGPDY+L +  G++
Sbjct  331  GGGGYTKENVARCWTYETGILLDSELPNVFFFPPEIPDNDYIKYFGPDYSLKIPGGHI  388


>gi|14588692|dbj|BAB61857.1|  histone deacetylase-like [Oryza sativa (japonica cultivar-group)]
 gi|20160969|dbj|BAB89903.1|  histone deacetylase-like [Oryza sativa (japonica cultivar-group)]
Length=481

 Score =  243 bits (619),  Expect = 6e-64
 Identities = 126/225 (56%), Positives = 162/225 (72%), Gaps = 6/225 (2%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHIRD  498
            DIVL I ELL   RRVLYVDIDVHHGDGV+ AF  ++RVMTVSFH+ G  FFPG+G + D
Sbjct  179  DIVLAIRELLAHFRRVLYVDIDVHHGDGVQAAFEASNRVMTVSFHQHGGGFFPGSGAVAD  238

Query  497  VGV-GNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLG  321
            VG  G G++ ALNVP++ G+ DE +  LF+PI+ +VMEV+QP+AVVLQCGADSL+GDRLG
Sbjct  239  VGKKGPGRYCALNVPVSVGIGDEEYHRLFEPIMARVMEVFQPEAVVLQCGADSLAGDRLG  298

Query  320  CFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNE  141
              NL+ +GHA C+ F+RSFN+PL++LGGGGYTI +VA CWC ETAVA+G E  N +P + 
Sbjct  299  ELNLTTRGHAQCVSFIRSFNLPLLLLGGGGYTINHVASCWCNETAVAIGKEIPNDIPKHG  358

Query  140  YYEYF-GPDYTLHVAPGNM---ENLNAPRDMEKIRNTLLEQLSKL  18
            +  ++   +Y LH          N N    ++ IR   +E LSKL
Sbjct  359  FDVFYKNQEYKLHYKLETKHLHRNRNTANSIDGIRMAAMENLSKL  403


>gi|32490318|emb|CAE04901.1|  OSJNBa0042I15.23 [Oryza sativa (japonica cultivar-group)]
Length=254

 Score =  239 bits (611),  Expect = 5e-63
 Identities = 109/196 (55%), Positives = 146/196 (74%), Gaps = 1/196 (0%)
 Frame = -3

Query  590  VEEAFYTTDRVMTVSFHKFGDFF-PGTGHIRDVGVGNGKHYALNVPLNDGMDDESFRGLF  414
            +++ F +   VMTVSFHK+GDFF PGTG I+D+G   GK+YA+N+PL DG+DD  F  LF
Sbjct  3    LKKPFISLTGVMTVSFHKYGDFFFPGTGDIKDIGEREGKYYAINIPLKDGIDDSGFTRLF  62

Query  413  QPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGG  234
            + +I KV+E Y P A+VLQCGADSL+ DRLGCFNLS++GHA+C++F++ FN+PL+V GGG
Sbjct  63   KTVIAKVVETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKKFNIPLLVTGGG  122

Query  233  GYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVAPGNMENLNAPRDMEK  54
            GYT  NVARCW  ET V +  E  N++P NEY +YF PDYTL V+  NM+NLN+   +  
Sbjct  123  GYTKENVARCWAVETGVLLDTELPNEIPDNEYIKYFAPDYTLKVSNVNMDNLNSKSYLSS  182

Query  53   IRNTLLEQLSKLSHAP  6
            I+  ++E L  + HAP
Sbjct  183  IKVQVMESLRAIQHAP  198


>gi|115484593|ref|NP_001067440.1|  Os11g0200000 [Oryza sativa (japonica cultivar-group)]
 gi|77549152|gb|ABA91949.1|  histone deacetylase, putative, expressed [Oryza sativa (japonica 
cultivar-group)]
 gi|113644662|dbj|BAF27803.1|  Os11g0200000 [Oryza sativa (japonica cultivar-group)]
Length=456

 Score =  239 bits (610),  Expect = 7e-63
 Identities = 125/236 (52%), Positives = 163/236 (69%), Gaps = 12/236 (5%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFG------DFFPGT  513
            DIVL I ELL   RRV+YVDID HHGDGV+ AF  ++RVMT+SFH++G      DFFPG+
Sbjct  171  DIVLAINELLGTFRRVIYVDIDAHHGDGVQNAFLDSNRVMTLSFHRYGKITPHKDFFPGS  230

Query  512  GHIRDVGVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSG  333
            G I ++G G G+HY++NVPL+ G+ D+ +  LF+PI+ K MEV+QP+A+VLQCGADSLSG
Sbjct  231  GAINEIGDGAGEHYSVNVPLDAGVRDDVYHTLFKPIVGKAMEVFQPEAIVLQCGADSLSG  290

Query  332  DRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVE---PD  162
            DRLG   LSV+GHA+C+ FLR FN+PL+++GGGGYTI +VA  WCYETAVAVG E   PD
Sbjct  291  DRLGGMELSVRGHAECVSFLRGFNLPLLLVGGGGYTINHVASAWCYETAVAVGKERKLPD  350

Query  161  N-KLPYNEY-YEYFGPDYTLHVAPGNMENL-NAPRDMEKIRNTLLEQLSKLSHAPS  3
            + ++P + Y   Y      LH                E  +  +LE LS++  APS
Sbjct  351  DIEIPSHGYELMYKNQGNKLHYKTSTATAARKRSSSTEVTKGKVLEHLSQVKRAPS  406


>gi|77549159|gb|ABA91956.1|  Histone deacetylase family protein [Oryza sativa (japonica cultivar-group)]
Length=461

 Score =  216 bits (549),  Expect = 8e-56
 Identities = 118/236 (50%), Positives = 155/236 (65%), Gaps = 24/236 (10%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFG------DFFPGT  513
            DIVL I ELL   RRV+YVDID HHGDGV+ AF  ++RVMT+SFH++G      +FFPG+
Sbjct  171  DIVLAINELLGTFRRVIYVDIDAHHGDGVQNAFLDSNRVMTLSFHRYGKITPHKNFFPGS  230

Query  512  GHIRDVGVGNGKHYALNVPLNDGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSG  333
            G I ++G G G+HY++NVPL+ G+  ++            MEV+QP+A+VLQCGADSLSG
Sbjct  231  GAINEIGAGAGEHYSVNVPLDAGVRADA------------MEVFQPEAIVLQCGADSLSG  278

Query  332  DRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVE---PD  162
            DRLG   LSV+GHA+C+ FLR FN+PL+++GGGGYTI +VA  WCYETAVAVG E   PD
Sbjct  279  DRLGGMELSVRGHAECVGFLRGFNLPLLLVGGGGYTINHVASTWCYETAVAVGKERELPD  338

Query  161  N-KLPYNEY-YEYFGPDYTLHVAPGNMENL-NAPRDMEKIRNTLLEQLSKLSHAPS  3
            + ++P + Y   Y      LH                E  +  +LE LS++  APS
Sbjct  339  DIEIPSHGYELMYKNQGDKLHYQKSTATAARKRSSSAEVTKGKVLEHLSQIERAPS  394


>gi|21637259|gb|AAM70418.1|AF512725_1  histone deacetylase [Arabidopsis thaliana]
Length=206

 Score =  129 bits (323),  Expect = 1e-29
 Identities = 61/78 (78%), Positives = 68/78 (87%), Gaps = 1/78 (1%)
 Frame = -3

Query  674  DIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHIRD  498
            D+VLGILELLK H RVLY+DIDVHHGDGVEEAFY TDRVMTVSFHKFGD FFPGTG +++
Sbjct  129  DLVLGILELLKHHPRVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDKFFPGTGDVKE  188

Query  497  VGVGNGKHYALNVPLNDG  444
            +G   GK YA+NVPL DG
Sbjct  189  IGEREGKFYAINVPLKDG  206


>gi|15229981|ref|NP_190035.1|  unknown protein [Arabidopsis thaliana]
 gi|7635471|emb|CAB88531.1|  putative protein [Arabidopsis thaliana]
Length=158

 Score =  110 bits (276),  Expect = 4e-24
 Identities = 47/105 (44%), Positives = 71/105 (67%), Gaps = 0/105 (0%)
 Frame = -3

Query  317  FNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEY  138
            F++   GHA+C++F++ FN+PL+V GGGGYT  NVARCW  ET + +  E  N++  N+Y
Sbjct  3    FSMLFTGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEISENDY  62

Query  137  YEYFGPDYTLHVAPGNMENLNAPRDMEKIRNTLLEQLSKLSHAPS  3
             +YF PD++L +  G++ENLN    +  I+  +LE L  + HAPS
Sbjct  63   IKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPS  107


>gi|21554265|gb|AAM63340.1|  histone deacetylase, putative [Arabidopsis thaliana]
Length=552

 Score =  106 bits (264),  Expect = 9e-23
 Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
 Frame = -3

Query  635  RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHIRDVGVGNGKHYALN  462
            ++VL VD DVHHG+G +E F     V+ +S H+   G+F+PGTG   +VG   G+ Y +N
Sbjct  305  KKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAADEVGSNGGEGYCVN  364

Query  461  VPLN-DGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADC  285
            VP +  G+ D+ +   FQ ++  +   + PD V++  G D+  GD LGC +++  G++  
Sbjct  365  VPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRM  424

Query  284  LRFLRSF-NVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLP  150
             + L       ++V+  GGY +R+++        V +G  P+N+LP
Sbjct  425  TQMLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGENPENELP  470


>gi|79597237|ref|NP_850609.2|  histone deacetylase [Arabidopsis thaliana]
Length=564

 Score =  106 bits (264),  Expect = 9e-23
 Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
 Frame = -3

Query  635  RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHIRDVGVGNGKHYALN  462
            ++VL VD DVHHG+G +E F     V+ +S H+   G+F+PGTG   +VG   G+ Y +N
Sbjct  305  KKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAADEVGSNGGEGYCVN  364

Query  461  VPLN-DGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADC  285
            VP +  G+ D+ +   FQ ++  +   + PD V++  G D+  GD LGC +++  G++  
Sbjct  365  VPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRM  424

Query  284  LRFLRSF-NVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLP  150
             + L       ++V+  GGY +R+++        V +G  P+N+LP
Sbjct  425  TQMLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGENPENELP  470


>gi|18401915|ref|NP_566612.1|  histone deacetylase [Arabidopsis thaliana]
Length=552

 Score =  106 bits (264),  Expect = 9e-23
 Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
 Frame = -3

Query  635  RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHIRDVGVGNGKHYALN  462
            ++VL VD DVHHG+G +E F     V+ +S H+   G+F+PGTG   +VG   G+ Y +N
Sbjct  305  KKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAADEVGSNGGEGYCVN  364

Query  461  VPLN-DGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADC  285
            VP +  G+ D+ +   FQ ++  +   + PD V++  G D+  GD LGC +++  G++  
Sbjct  365  VPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRM  424

Query  284  LRFLRSF-NVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLP  150
             + L       ++V+  GGY +R+++        V +G  P+N+LP
Sbjct  425  TQMLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGENPENELP  470


>gi|26451468|dbj|BAC42833.1|  putative histone deacetylase [Arabidopsis thaliana]
Length=552

 Score =  104 bits (260),  Expect = 3e-22
 Identities = 55/166 (33%), Positives = 93/166 (56%), Gaps = 4/166 (2%)
 Frame = -3

Query  635  RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHIRDVGVGNGKHYALN  462
            ++VL VD DVHHG+G +E F     V+ +S H+   G F+PGTG   +VG   G+ Y +N
Sbjct  305  KKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGIFYPGTGAADEVGSNGGEGYCVN  364

Query  461  VPLN-DGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADC  285
            VP +  G+ D+ +   FQ ++  +   + PD V++  G D+  GD LGC +++  G++  
Sbjct  365  VPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRM  424

Query  284  LRFLRSF-NVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLP  150
             + L       ++V+  GGY +R+++        V +G  P+N+LP
Sbjct  425  TQMLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGENPENELP  470


>gi|109716222|gb|ABG43093.1|  histone deacetylase HDAC4 [Triticum aestivum]
Length=404

 Score = 96.7 bits (239),  Expect = 7e-20
 Identities = 52/161 (32%), Positives = 90/161 (55%), Gaps = 4/161 (2%)
 Frame = -3

Query  635  RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHIRDVGVGNGKHYALN  462
            ++VL VD DVHHG+G +E F     V+ +S H+   G F+PGTG   +VGV +GK +++N
Sbjct  148  KKVLIVDWDVHHGNGTQEIFEGNKSVLYISLHRHEDGSFYPGTGAADEVGVLDGKGFSVN  207

Query  461  VPLN-DGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADC  285
            +P +  G+ D  +   FQ ++  +   + PD  ++  G D+  GD LGC +++  G++  
Sbjct  208  IPWSCGGVGDNDYIFAFQHVVLPIATEFAPDITIISAGFDAARGDPLGCCDVTPAGYSQM  267

Query  284  LRFLRSFNV-PLMVLGGGGYTIRNVARCWCYETAVAVGVEP  165
               L + +   L+V+  GGY +R+++        V +G  P
Sbjct  268  TSMLTACSEGKLLVILEGGYNLRSISSSATEVVKVLLGDGP  308


>gi|11994115|dbj|BAB01118.1|  unnamed protein product [Arabidopsis thaliana]
Length=577

 Score = 96.3 bits (238),  Expect = 9e-20
 Identities = 54/166 (32%), Positives = 92/166 (55%), Gaps = 10/166 (6%)
 Frame = -3

Query  635  RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHIRDVGVGNGKHYALN  462
            ++VL VD DVHHG+G +E F     V+ +S H+   G+F+PGTG   +VG   G+ Y +N
Sbjct  324  KKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAADEVGSNGGEGYCVN  383

Query  461  VPLN-DGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADC  285
            VP +  G+ D+ +   FQ ++  +      D V++  G D+  GD LGC +++  G++  
Sbjct  384  VPWSCGGVGDKDYIFAFQHVVLPI------DFVIISAGFDAARGDPLGCCDVTPAGYSRM  437

Query  284  LRFLRSF-NVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLP  150
             + L       ++V+  GGY +R+++        V +G  P+N+LP
Sbjct  438  TQMLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGENPENELP  483


>gi|22135463|gb|AAM93212.1|AF527611_1  histone deacetylase HDA110 isoform 1 [Zea mays]
Length=618

 Score = 95.5 bits (236),  Expect = 2e-19
 Identities = 52/162 (32%), Positives = 92/162 (56%), Gaps = 4/162 (2%)
 Frame = -3

Query  635  RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHIRDVGVGNGKHYALN  462
            ++VL VD DVHHG+G +E F     V+ +S H+   G+F+PGTG   +VGV +G+ +++N
Sbjct  359  KKVLIVDWDVHHGNGTQEIFDGDKTVLYISLHRHEDGNFYPGTGAAHEVGVLDGQGFSVN  418

Query  461  VPLN-DGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADC  285
            +P +  G+ D+ +   FQ ++  +   +  D  ++  G D+  GD LGC +++  G++  
Sbjct  419  IPWSRGGVGDDDYIFAFQTVVLPIASEFAADITIISAGFDAARGDPLGCCDVTPTGYSWM  478

Query  284  LRFLR-SFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPD  162
               L  S N  L+V+  GGY +R+++        V +G  P+
Sbjct  479  TSLLAGSSNGRLLVILEGGYNLRSISSSATEVVKVLLGEGPN  520


>gi|22135469|gb|AAM93215.1|AF527614_1  histone deacetylase HDA110 isoform 4 [Zea mays]
Length=407

 Score = 95.5 bits (236),  Expect = 2e-19
 Identities = 52/162 (32%), Positives = 92/162 (56%), Gaps = 4/162 (2%)
 Frame = -3

Query  635  RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHIRDVGVGNGKHYALN  462
            ++VL VD DVHHG+G +E F     V+ +S H+   G+F+PGTG   +VGV +G+ +++N
Sbjct  148  KKVLIVDWDVHHGNGTQEIFDGDKTVLYISLHRHEDGNFYPGTGAAHEVGVLDGQGFSVN  207

Query  461  VPLN-DGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADC  285
            +P +  G+ D+ +   FQ ++  +   +  D  ++  G D+  GD LGC +++  G++  
Sbjct  208  IPWSRGGVGDDDYIFAFQTVVLPIASEFAADITIISAGFDAARGDPLGCCDVTPTGYSWM  267

Query  284  LRFLR-SFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPD  162
               L  S N  L+V+  GGY +R+++        V +G  P+
Sbjct  268  TSLLAGSSNGRLLVILEGGYNLRSISSSATEVVKVLLGEGPN  309


>gi|22135465|gb|AAM93213.1|AF527612_1  histone deacetylase HDA110 isoform 2 [Zea mays]
 gi|22135467|gb|AAM93214.1|AF527613_1  histone deacetylase HDA110 isoform 3 [Zea mays]
Length=511

 Score = 95.5 bits (236),  Expect = 2e-19
 Identities = 52/162 (32%), Positives = 92/162 (56%), Gaps = 4/162 (2%)
 Frame = -3

Query  635  RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHIRDVGVGNGKHYALN  462
            ++VL VD DVHHG+G +E F     V+ +S H+   G+F+PGTG   +VGV +G+ +++N
Sbjct  252  KKVLIVDWDVHHGNGTQEIFDGDKTVLYISLHRHEDGNFYPGTGAAHEVGVLDGQGFSVN  311

Query  461  VPLN-DGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADC  285
            +P +  G+ D+ +   FQ ++  +   +  D  ++  G D+  GD LGC +++  G++  
Sbjct  312  IPWSRGGVGDDDYIFAFQTVVLPIASEFAADITIISAGFDAARGDPLGCCDVTPTGYSWM  371

Query  284  LRFLR-SFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPD  162
               L  S N  L+V+  GGY +R+++        V +G  P+
Sbjct  372  TSLLAGSSNGRLLVILEGGYNLRSISSSATEVVKVLLGEGPN  413


>gi|115470717|ref|NP_001058957.1|  Os07g0164100 [Oryza sativa (japonica cultivar-group)]
 gi|113610493|dbj|BAF20871.1|  Os07g0164100 [Oryza sativa (japonica cultivar-group)]
Length=623

 Score = 94.7 bits (234),  Expect = 3e-19
 Identities = 50/161 (31%), Positives = 91/161 (56%), Gaps = 4/161 (2%)
 Frame = -3

Query  635  RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHIRDVGVGNGKHYALN  462
            ++VL VD DVHHG+G +E F   + V+ +S H+   G F+PGTG   +VGV +G+ +++N
Sbjct  359  KKVLIVDWDVHHGNGTQEIFDGDNSVLYISLHRHEDGSFYPGTGAANEVGVMDGQGFSVN  418

Query  461  VPLN-DGMDDESFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADC  285
            +P +  G+ D  +   F+ ++  +   + PD  ++  G D+  GD LGC +++  G++  
Sbjct  419  IPWSRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRM  478

Query  284  LRFLRSFNV-PLMVLGGGGYTIRNVARCWCYETAVAVGVEP  165
               L + +   L+V+  GGY +R+++        V +G  P
Sbjct  479  ASMLTACSQGKLLVILEGGYNLRSISSSATEVVKVLLGDSP  519
Distribution of 93 Blast Hits on the Query Sequence
