Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168939524-23002-97944611892.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig245 Length=399
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|92880875|gb|ABE85899.1| Peptidylprolyl isomerase, FKBP-typ... 131 8e-31 gi|92872974|gb|ABE81489.1| Peptidylprolyl isomerase, FKBP-type [ 131 8e-31 gi|7630021|emb|CAB88363.1| pasticcino 1 [Arabidopsis thaliana] 114 8e-26 gi|3080738|gb|AAC39444.1| pasticcino 1-A [Arabidopsis thaliana] 114 8e-26 gi|3080740|gb|AAC39445.1| pasticcino 1-D [Arabidopsis thaliana] 114 8e-26 gi|30693980|ref|NP_850701.1| PAS1 (PASTICCINO 1); FK506 bindi... 114 8e-26 gi|18409970|ref|NP_566993.1| PAS1 (PASTICCINO 1); FK506 bindi... 114 8e-26 gi|115453163|ref|NP_001050182.1| Os03g0367000 [Oryza sativa (... 114 1e-25 gi|115462585|ref|NP_001054892.1| Os05g0204900 [Oryza sativa (... 44.3 1e-04 gi|28141004|gb|AAO26213.1| type 5 protein serine/threonine ph... 40.0 0.002 gi|24954813|gb|AAN64317.1| type 5 serine/threonine phosphatas... 40.0 0.002 gi|18406066|ref|NP_565985.1| PP5; phosphoprotein phosphatase/... 40.0 0.002 gi|79324899|ref|NP_001031534.1| PP5 [Arabidopsis thaliana] >g... 40.0 0.002 gi|46095312|gb|AAS80154.1| protein serine/threonine phosphatase 39.7 0.003 gi|77548684|gb|ABA91481.1| peptidyl-prolyl cis-trans isomeras... 39.7 0.003 gi|92873999|gb|ABE82329.1| Peptidylprolyl isomerase, FKBP-type [ 39.3 0.004 gi|115487318|ref|NP_001066146.1| Os12g0145500 [Oryza sativa (... 38.9 0.005 gi|115477393|ref|NP_001062292.1| Os08g0525600 [Oryza sativa (... 38.9 0.005 gi|118138347|pdb|2IF4|A Chain A, Crystal Structure Of A Multi... 38.1 0.009 gi|20260220|gb|AAM13008.1| FKBP-type peptidyl-prolyl cis-tran... 38.1 0.009 gi|30686321|ref|NP_188801.2| TWD1 (TWISTED DWARF 1); FK506 bi... 38.1 0.009 gi|3023751|sp|Q43207|FKB70_WHEAT 70 kDa peptidyl-prolyl isome... 37.4 0.016 gi|116061676|emb|CAL52394.1| HSP90 co-chaperone CPR7/Cyclophilin 36.6 0.027 gi|47027079|gb|AAT08754.1| peptidylprolyl isomerase [Hyacinthus 36.2 0.035 gi|86438849|emb|CAJ44367.1| putative FKBP-Like protein [Malus x 35.8 0.046 gi|1354207|gb|AAB82061.1| rof1 [Arabidopsis thaliana] 34.3 0.13 gi|9294180|dbj|BAB02082.1| peptidylprolyl isomerase; FK506-bi... 34.3 0.13 gi|30687816|ref|NP_189160.3| ROF1 (ROTAMASE FKBP 1); FK506 bi... 34.3 0.13 gi|115479053|ref|NP_001063120.1| Os09g0401200 [Oryza sativa (... 32.7 0.39 gi|115446187|ref|NP_001046873.1| Os02g0491400 [Oryza sativa (... 32.7 0.39 gi|13374858|emb|CAC34492.1| putative protein [Arabidopsis thalia 32.0 0.66 gi|30688239|ref|NP_680187.2| unknown protein [Arabidopsis thalia 32.0 0.66 gi|115457870|ref|NP_001052535.1| Os04g0352400 [Oryza sativa (... 32.0 0.66 gi|26452527|dbj|BAC43348.1| unknown protein [Arabidopsis thalian 32.0 0.66 gi|115467098|ref|NP_001057148.1| Os06g0216800 [Oryza sativa (... 31.6 0.86 gi|15217972|ref|NP_176141.1| peptidyl-prolyl cis-trans isomer... 31.2 1.1 gi|1915960|emb|CAA68913.1| peptidylprolyl isomerase [Triticum ae 30.8 1.5 gi|18397936|ref|NP_565381.1| SQN (SQUINT) [Arabidopsis thalia... 30.8 1.5 gi|115482622|ref|NP_001064904.1| Os10g0486900 [Oryza sativa (... 30.4 1.9 gi|18087888|gb|AAL59042.1|AC087182_25 putative tetratricopeptide 30.4 1.9 gi|21536657|gb|AAM60989.1| tetratricoredoxin [Arabidopsis thalia 30.0 2.5 gi|30684711|ref|NP_188415.2| ATTDX (TETRATICOPEPTIDE DOMAIN-C... 30.0 2.5 gi|9294491|dbj|BAB02710.1| unnamed protein product [Arabidopsis 30.0 2.5 gi|116830591|gb|ABK28253.1| unknown [Arabidopsis thaliana] 29.6 3.3 gi|2832636|emb|CAA16765.1| hypothetical protein [Arabidopsis ... 29.6 3.3 gi|22328789|ref|NP_193643.2| unknown protein [Arabidopsis tha... 29.6 3.3 gi|92894897|gb|ABE92431.1| hypothetical protein MtrDRAFT_AC14... 29.3 4.3 gi|42567636|ref|NP_196051.2| pectate lyase [Arabidopsis thali... 29.3 4.3 gi|18041548|gb|AAL54858.1| tetratricoredoxin [Nicotiana tabacum] 28.9 5.6 gi|116060365|emb|CAL55701.1| HSP90 co-chaperone CPR7/Cyclophilin 28.5 7.3 gi|115454069|ref|NP_001050635.1| Os03g0606100 [Oryza sativa (... 28.5 7.3 gi|15233212|ref|NP_191739.1| unknown protein [Arabidopsis tha... 28.5 7.3 gi|116060285|emb|CAL55621.1| Myosin class II heavy chain (ISS) [ 28.1 9.6 gi|116056349|emb|CAL56732.1| HSP90 co-chaperone CPR7/Cyclophilin 28.1 9.6 gi|115454599|ref|NP_001050900.1| Os03g0680100 [Oryza sativa (... 28.1 9.6 gi|92883253|gb|ABE86847.1| Frigida-like [Medicago truncatula] 28.1 9.6 gi|44662989|gb|AAS47585.1| chloroplast Toc64-2 [Physcomitrella p 28.1 9.6 gi|33943103|gb|AAO89565.2| ZIP [Nicotiana tabacum] 28.1 9.6 gi|30421186|gb|AAP31311.1| ABI3-interacting protein 1; CnAIP1 [C 28.1 9.6 gi|13435253|gb|AAK26128.1|AC084406_11 putative ankyrin [Oryza... 28.1 9.6 gi|115443603|ref|NP_001045581.1| Os02g0100300 [Oryza sativa (... 28.1 9.6 gi|115474117|ref|NP_001060657.1| Os07g0682000 [Oryza sativa (... 28.1 9.6
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 238 Number of extensions: 1 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 399 Length of database: 101054579 Length adjustment: 99 Effective length of query: 300 Effective length of database: 73003028 Effective search space: 2482102952 Effective search space used: 2482102952 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)