Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168940789-610-191190952498.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig268 Length=566
Score E Sequences producing significant alignments: (Bits) Value gi|115481988|ref|NP_001064587.1| Os10g0412100 [Oryza sativa (... 187 2e-47 gi|115450953|ref|NP_001049077.1| Os03g0166800 [Oryza sativa (... 184 1e-46 gi|108706371|gb|ABF94166.1| Endonuclease/Exonuclease/phosphat... 184 1e-46 gi|6735373|emb|CAB68194.1| putative protein [Arabidopsis thalian 182 9e-46 gi|22331849|ref|NP_191415.2| hydrolase [Arabidopsis thaliana]... 182 9e-46 gi|15231075|ref|NP_191417.1| hydrolase [Arabidopsis thaliana]... 181 2e-45 gi|116060002|emb|CAL56061.1| Glucose-repressible alcohol dehy... 102 7e-22 gi|42570103|ref|NP_683491.2| unknown protein [Arabidopsis thalia 45.1 2e-04 gi|17979010|gb|AAL47464.1| At5g11350/F2I11_240 [Arabidopsis t... 41.2 0.003 gi|8953397|emb|CAB96670.1| putative protein [Arabidopsis thalian 41.2 0.003 gi|22326729|ref|NP_196696.2| catalytic [Arabidopsis thaliana] 41.2 0.003 gi|116057170|emb|CAL51597.1| Glucose-repressible alcohol dehy... 40.8 0.003 gi|115438464|ref|NP_001043546.1| Os01g0610600 [Oryza sativa (... 40.8 0.003 gi|92895293|gb|ABE92648.1| putative protein-related [Medicago tr 39.3 0.010 gi|92893098|gb|ABE91612.1| Endonuclease/exonuclease/phosphatase 38.9 0.012 gi|79406681|ref|NP_188479.3| unknown protein [Arabidopsis thalia 38.9 0.012 gi|11994114|dbj|BAB01117.1| unnamed protein product [Arabidopsis 38.9 0.012 gi|115463669|ref|NP_001055434.1| Os05g0389500 [Oryza sativa (... 37.0 0.047 gi|28973671|gb|AAO64154.1| unknown protein [Arabidopsis thali... 35.8 0.11 gi|12322547|gb|AAG51276.1|AC027135_17 hypothetical protein [A... 35.8 0.11 gi|79605875|ref|NP_973943.2| hydrolase [Arabidopsis thaliana] 35.8 0.11 gi|42562445|ref|NP_174435.2| hydrolase [Arabidopsis thaliana] 35.8 0.11 gi|116055147|emb|CAL57543.1| Glucose-repressible alcohol dehy... 33.1 0.69 gi|52075768|dbj|BAD44988.1| hypothetical protein [Oryza sativa ( 32.3 1.2 gi|38566618|gb|AAR24199.1| At1g73875 [Arabidopsis thaliana] >... 31.6 2.0 gi|12322536|gb|AAG51265.1|AC027135_6 hypothetical protein [Arabi 31.2 2.6 gi|15222370|ref|NP_174438.1| hydrolase [Arabidopsis thaliana]... 31.2 2.6
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 353 Number of extensions: 3 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 566 Length of database: 101054579 Length adjustment: 107 Effective length of query: 459 Effective length of database: 70736236 Effective search space: 5729635116 Effective search space used: 5729635116 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)