Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168940898-25645-213397096258.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig273 Length=461
Score E Sequences producing significant alignments: (Bits) Value gi|92875418|gb|ABE83411.1| Allergen V5/Tpx-1 related [Medicago t 263 3e-70 gi|15235992|ref|NP_194308.1| unknown protein [Arabidopsis tha... 222 4e-58 gi|115449115|ref|NP_001048337.1| Os02g0786900 [Oryza sativa (... 213 3e-55 gi|2500715|sp|Q40374|PR1_MEDTR Pathogenesis-related protein P... 178 8e-45 gi|22327916|ref|NP_680450.1| unknown protein [Arabidopsis tha... 176 3e-44 gi|15235994|ref|NP_194309.1| unknown protein [Arabidopsis tha... 174 1e-43 gi|15234704|ref|NP_194761.1| unknown protein [Arabidopsis tha... 168 7e-42 gi|115449113|ref|NP_001048336.1| Os02g0786500 [Oryza sativa (... 163 2e-40 gi|42561586|ref|NP_171638.2| unknown protein [Arabidopsis tha... 154 1e-37 gi|9665145|gb|AAF97329.1|AC023628_10 Similar to pathogenesis-rel 154 1e-37 gi|3702665|emb|CAA07474.1| pathogenisis-related protein 1.2 [Tri 154 1e-37 gi|117655421|gb|ABK55610.1| pathogenesis-related protein PR1c... 152 6e-37 gi|401831|emb|CAA52893.1| PR-1a pathogenesis related protein ... 151 1e-36 gi|115436666|ref|NP_001043091.1| Os01g0382400 [Oryza sativa (... 151 1e-36 gi|115465827|ref|NP_001056513.1| Os05g0595200 [Oryza sativa (... 150 2e-36 gi|55733877|gb|AAV59384.1| unknown protein [Oryza sativa (jap... 149 3e-36 gi|115470433|ref|NP_001058815.1| Os07g0129200 [Oryza sativa (... 148 7e-36 gi|12005673|gb|AAG44566.1|AF251277_1 acidic PR-1 type pathoge... 148 7e-36 gi|732807|emb|CAA88618.1| type-1 pathogenesis-related protein [H 148 9e-36 gi|75993969|gb|ABA34020.1| pathogenesis-related maize seed pr... 147 1e-35 gi|130940|sp|Q00008|PRMS_MAIZE Pathogenesis-related protein P... 147 1e-35 gi|75993977|gb|ABA34024.1| pathogenesis-related maize seed pr... 147 2e-35 gi|75993951|gb|ABA34011.1| pathogenesis-related maize seed pr... 145 5e-35 gi|115436662|ref|NP_001043089.1| Os01g0382000 [Oryza sativa (... 145 6e-35 gi|14334165|gb|AAK60565.1|AF384143_1 pathogenesis-related protei 144 1e-34 gi|20056|emb|CAA36790.1| unnamed protein product [Nicotiana taba 144 1e-34 gi|115470431|ref|NP_001058814.1| Os07g0128800 [Oryza sativa (... 144 1e-34 gi|536789|emb|CAA29023.1| PR-1c protein [Nicotiana tabacum] 144 1e-34 gi|115481370|ref|NP_001064278.1| Os10g0191300 [Oryza sativa (... 144 1e-34 gi|130828|sp|P09042|PR1C_TOBAC Pathogenesis-related protein 1... 144 1e-34 gi|536788|emb|CAA31010.1| PR1c preprotein [Nicotiana tabacum] 144 1e-34 gi|15235056|ref|NP_195098.1| unknown protein [Arabidopsis tha... 144 2e-34 gi|15235962|ref|NP_194875.1| unknown protein [Arabidopsis tha... 144 2e-34 gi|548589|sp|P35793|PR13_HORVU Pathogenesis-related protein P... 144 2e-34 gi|75993957|gb|ABA34014.1| pathogenesis-related maize seed pr... 143 2e-34 gi|548588|sp|P35792|PR12_HORVU Pathogenesis-related protein P... 143 2e-34 gi|19944|emb|CAA30017.1| unnamed protein product [Nicotiana taba 143 2e-34 gi|3702663|emb|CAA07473.1| pathogenisis-related protein 1.1 [Tri 143 3e-34 gi|115489728|ref|NP_001067351.1| Os12g0633400 [Oryza sativa (... 143 3e-34 gi|75994061|gb|ABA34066.1| pathogenesis-related protein 1 [Ze... 143 3e-34 gi|75994041|gb|ABA34056.1| pathogenesis-related protein 1 [Zea m 143 3e-34 gi|3290004|gb|AAC25629.1| pathogenesis related protein-1 [Zea... 143 3e-34 gi|548592|sp|Q05968|PR1_HORVU Pathogenesis-related protein 1 ... 143 3e-34 gi|218304|dbj|BAA14220.1| PR1a protein precursor [Nicotiana t... 143 3e-34 gi|228409|prf||1803521A pathogenesis-related protein 1 143 3e-34 gi|130826|sp|P08299|PR1A_TOBAC Pathogenesis-related protein 1... 142 4e-34 gi|579402|emb|CAA31008.1| PR1a preprotein [Nicotiana tabacum] 142 4e-34 gi|30144637|gb|AAP14676.1| pathogenesis related-1 [Triticum aest 142 5e-34 gi|75994087|gb|ABA34079.1| pathogenesis-related protein 1 [Zea d 142 5e-34 gi|73921468|gb|AAZ94266.1| pathogenesis-related 1b [Triticum mon 142 5e-34 gi|75994049|gb|ABA34060.1| pathogenesis-related protein 1 [Zea m 141 9e-34 gi|75994053|gb|ABA34062.1| pathogenesis-related protein 1 [Zea m 141 9e-34 gi|75994083|gb|ABA34077.1| pathogenesis-related protein 1 [Zea d 141 9e-34 gi|75994039|gb|ABA34055.1| pathogenesis-related protein 1 [Ze... 141 9e-34 gi|75994055|gb|ABA34063.1| pathogenesis-related protein 1 [Ze... 141 1e-33 gi|115470437|ref|NP_001058817.1| Os07g0129400 [Oryza sativa (... 140 2e-33 gi|34395063|dbj|BAC84725.1| putative pathogenesis-related pro... 140 2e-33 gi|17221641|dbj|BAB78476.1| PR-1 [Solanum torvum] 139 4e-33 gi|115470435|ref|NP_001058816.1| Os07g0129300 [Oryza sativa (... 139 4e-33 gi|1228950|emb|CAA65420.1| pathogenesis-related protein 1 [Arabi 137 1e-32 gi|130827|sp|P07053|PR1B_TOBAC Pathogenesis-related protein 1... 137 2e-32 gi|19948|emb|CAA31009.1| PR1b preprotein [Nicotiana tabacum] 137 2e-32 gi|728622|emb|CAA29022.1| PR-1b protein [Nicotiana tabacum] 137 2e-32 gi|2500716|sp|Q41359|PR1_SAMNI Pathogenesis-related protein P... 137 2e-32 gi|1469932|gb|AAB05225.1| pathogenesis-related protein-1 136 3e-32 gi|92882054|gb|ABE86578.1| Allergen V5/Tpx-1 related [Medicago t 136 4e-32 gi|15230919|ref|NP_188603.1| unknown protein [Arabidopsis tha... 135 5e-32 gi|113531168|dbj|BAF03626.1| pathogenesis related protein 1 [Eut 134 1e-31 gi|19970|emb|CAA47374.1| prb-1b [Nicotiana tabacum] 133 3e-31 gi|13560653|gb|AAK30143.1|AF348141_1 pathogenesis-related pro... 132 5e-31 gi|83853951|gb|ABC47922.1| pathogenesis-related protein 1a [Malu 130 2e-30 gi|33440014|gb|AAQ19031.1| Prb1 [Oryza sativa (japonica cultivar 130 2e-30 gi|73921466|gb|AAZ94265.1| pathogenesis-related 1a [Triticum mon 130 2e-30 gi|115470419|ref|NP_001058808.1| Os07g0124900 [Oryza sativa (... 130 2e-30 gi|4928711|gb|AAD33696.1|AF136636_1 PR1a precursor [Glycine max] 130 3e-30 gi|15239598|ref|NP_197985.1| unknown protein [Arabidopsis tha... 129 3e-30 gi|116830447|gb|ABK28181.1| unknown [Arabidopsis thaliana] 129 6e-30 gi|15225974|ref|NP_179068.1| PR1 (PATHOGENESIS-RELATED GENE 1... 129 6e-30 gi|15232719|ref|NP_187570.1| unknown protein [Arabidopsis tha... 128 1e-29 gi|83031480|gb|ABB96918.1| pathogenesis-related protein 1 [Triti 127 1e-29 gi|548586|sp|Q04108|PR04_LYCES Pathogenesis-related leaf prot... 127 2e-29 gi|50726421|dbj|BAD34031.1| putative pathogenesis related pro... 126 3e-29 gi|76873802|emb|CAE51954.1| putative basic PR1 [Pisum sativum] 126 4e-29 gi|51950706|gb|AAU15051.1| Cyn d 24 [Cynodon dactylon] 125 5e-29 gi|2414525|emb|CAA04881.1| pathogenesis-related protein [Solanum 125 5e-29 gi|21726980|emb|CAD38276.1| pathogenesis related protein isoform 125 6e-29 gi|47497544|dbj|BAD19616.1| putative pathogenesis-related pro... 125 6e-29 gi|15222865|ref|NP_175428.1| unknown protein [Arabidopsis tha... 125 8e-29 gi|19073340|gb|AAL84768.1|AF475286_1 pathogenesis-related protei 124 1e-28 gi|130846|sp|P11670|PRB1_TOBAC Basic form of pathogenesis-rel... 124 1e-28 gi|6066750|emb|CAB58263.1| pathogenesis related protein PR-1 [So 123 2e-28 gi|15241922|ref|NP_195893.1| unknown protein [Arabidopsis tha... 123 3e-28 gi|21726982|emb|CAD38277.1| pathogenesis related protein isoform 123 3e-28 gi|33413141|emb|CAD60273.1| putative pathogenesis related pro... 122 4e-28 gi|47497545|dbj|BAD19617.1| putative pathogenesis-related pro... 122 4e-28 gi|115470421|ref|NP_001058809.1| Os07g0125000 [Oryza sativa (... 122 4e-28 gi|115470425|ref|NP_001058811.1| Os07g0127500 [Oryza sativa (... 122 4e-28 gi|1709754|sp|Q08697|PR1A_LYCES Pathogenesis-related protein ... 122 4e-28 gi|15625250|gb|AAL01594.1| pathogenesis-related protein 1b precu 122 5e-28 gi|115449117|ref|NP_001048338.1| Os02g0787000 [Oryza sativa (... 122 5e-28
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 416 Number of extensions: 12 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 461 Length of database: 101054579 Length adjustment: 103 Effective length of query: 358 Effective length of database: 71869632 Effective search space: 3593481600 Effective search space used: 3593481600 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 62 (28.5 bits)