Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168927203-2137-21230854038.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig31 Length=258
Score E Sequences producing significant alignments: (Bits) Value gi|115466238|ref|NP_001056718.1| Os06g0134800 [Oryza sativa (... 121 7e-28 gi|79470337|ref|NP_192950.2| aminomethyltransferase [Arabidop... 115 4e-26 gi|4586118|emb|CAB40954.1| putative protein [Arabidopsis thal... 68.2 9e-12 gi|41052801|dbj|BAD07669.1| putative transcription factor EIL... 32.7 0.40 gi|115486765|ref|NP_001068526.1| Os11g0701700 [Oryza sativa (... 30.4 2.0 gi|115478500|ref|NP_001062845.1| Os09g0315200 [Oryza sativa (... 30.4 2.0 gi|13899000|gb|AAK48931.1|AF359252_1 extracellular polypeptide E 30.4 2.0 gi|34394786|dbj|BAC84200.1| hypothetical protein [Oryza sativ... 30.4 2.0 gi|115482608|ref|NP_001064897.1| Os10g0485500 [Oryza sativa (... 30.0 2.6 gi|12321185|gb|AAG50687.1|AC079829_20 Pto kinase interactor, put 29.6 3.4 gi|79352581|ref|NP_173940.2| ATP binding / protein kinase/ pr... 29.6 3.4 gi|51849610|dbj|BAD42333.1| ribulose-1,5-bisphosphate carboxy... 29.3 4.4 gi|51849612|dbj|BAD42334.1| ribulose-1,5-bisphosphate carboxy... 29.3 4.4 gi|77554822|gb|ABA97618.1| retrotransposon protein, putative,... 29.3 4.4 gi|54290768|dbj|BAD61389.1| putative dehydroquinate dehydrata... 29.3 4.4 gi|15226620|ref|NP_179179.1| copper ion binding / electron tr... 29.3 4.4 gi|115457944|ref|NP_001052572.1| Os04g0373000 [Oryza sativa (... 28.9 5.8 gi|63003186|dbj|BAD97870.1| LHY homologue1 [Lemna gibba] 28.9 5.8 gi|53831213|gb|AAU95280.1| R1 [Solanum tuberosum] 28.9 5.8 gi|53831211|gb|AAU95279.1| R1 [Solanum tuberosum] 28.9 5.8 gi|49388536|dbj|BAD25658.1| hypothetical protein [Oryza sativ... 28.9 5.8 gi|42407706|dbj|BAD08854.1| hypothetical protein [Oryza sativa ( 28.9 5.8 gi|116057179|emb|CAL51606.1| unnamed protein product [Ostreococc 28.5 7.5 gi|115460960|ref|NP_001054080.1| Os04g0649100 [Oryza sativa (... 28.5 7.5 gi|115451937|ref|NP_001049569.1| Os03g0251000 [Oryza sativa (... 28.5 7.5 gi|7715606|gb|AAF68124.1|AC010793_19 F20B17.7 [Arabidopsis thali 28.5 7.5 gi|42563356|ref|NP_178082.2| ATP binding / kinase/ protein ki... 28.5 7.5 gi|38345500|emb|CAE01667.2| OSJNBa0010D21.13 [Oryza sativa (japo 28.5 7.5 gi|115453429|ref|NP_001050315.1| Os03g0400700 [Oryza sativa (... 28.1 9.8 gi|75261516|sp|Q6L3L0|R1B23_SOLDE Putative late blight resist... 28.1 9.8 gi|75261520|sp|Q6L3N7|R1C3_SOLDE Putative late blight resista... 28.1 9.8 gi|14018071|gb|AAK52134.1|AC084380_7 hypothetical protein [Or... 28.1 9.8 gi|41400381|gb|AAS07042.1| minus agglutinin [Chlamydomonas reinh 28.1 9.8 gi|27652140|gb|AAO17559.1| opaque 2 [Zea mays subsp. parviglumis 28.1 9.8 gi|68159639|gb|AAY86426.1| Opaque-2 [Zea mays] 28.1 9.8 gi|68159681|gb|AAY86457.1| Opaque-2 [Zea mays subsp. parviglumis 28.1 9.8 gi|68159631|gb|AAY86420.1| Opaque-2 [Zea mays] 28.1 9.8 gi|55296859|dbj|BAD68296.1| hypothetical protein [Oryza sativa ( 28.1 9.8 gi|34395373|dbj|BAC84442.1| unknown protein [Oryza sativa (ja... 28.1 9.8
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 161 Number of extensions: 1 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 258 Length of database: 101054579 Length adjustment: 56 Effective length of query: 202 Effective length of database: 85187035 Effective search space: 2555611050 Effective search space used: 2555611050 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)