Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168927280-6469-127040022572.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig35 Length=640
Score E Sequences producing significant alignments: (Bits) Value gi|15233141|ref|NP_191713.1| aminopeptidase/ catalytic/ pepti... 311 2e-84 gi|115466598|ref|NP_001056898.1| Os06g0163600 [Oryza sativa (... 287 3e-77 gi|116059343|emb|CAL55050.1| unnamed protein product [Ostreococc 107 5e-23 gi|115443879|ref|NP_001045719.1| Os02g0121600 [Oryza sativa (... 32.0 2.0 gi|14253155|emb|CAC39317.1| VMP2 protein [Volvox carteri f. naga 32.0 2.0 gi|62734191|gb|AAX96300.1| At1g34320 [Oryza sativa (japonica ... 29.6 9.8 gi|258215|gb|AAB23813.1| NaPRP3 [Nicotiana alata] 29.6 9.8
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 483 Number of extensions: 0 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 640 Length of database: 101054579 Length adjustment: 108 Effective length of query: 532 Effective length of database: 70452887 Effective search space: 7397553135 Effective search space used: 7397553135 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 65 (29.6 bits)