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BLASTX 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168927296-30653-111251362123.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig36
Length=284


Distribution of 76 Blast Hits on the Query Sequence



Related Structures

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|18409378|ref|NP_564977.1|  ATAMY3; alpha-amylase [Arabidops...  80.1    2e-15 UniGene infoGene info
gi|60652321|gb|AAX33233.1|  plastid alpha-amylase [Actinidia chin  80.1    2e-15
gi|12325228|gb|AAG52558.1|AC010675_6  putative alpha-amylase; 603  80.1    2e-15
gi|11139274|gb|AAG31655.1|  PRLI-interacting factor E [Arabidopsi  80.1    2e-15 UniGene info
gi|60652317|gb|AAX33231.1|  plastid alpha-amylase [Malus x domest  76.3    3e-14 UniGene info
gi|115439565|ref|NP_001044062.1|  Os01g0715400 [Oryza sativa (...  53.9    2e-07 Gene info
gi|115458194|ref|NP_001052697.1|  Os04g0403300 [Oryza sativa (...  47.4    2e-05 Gene info
gi|38346145|emb|CAE02023.2|  OSJNBb0118P14.5 [Oryza sativa (japon  47.4    2e-05 Gene info
gi|15222959|ref|NP_177740.1|  ATAMY2; alpha-amylase [Arabidops...  46.2    3e-05 UniGene infoGene info
gi|6573706|gb|AAF17626.1|AC009978_2  T23E18.6 [Arabidopsis thalia  46.2    3e-05
gi|116059924|emb|CAL55983.1|  alpha amylase 2 (IC) [Ostreococcus   44.7    1e-04
gi|46360130|gb|AAS88888.1|  AAMYI [Ostreococcus tauri]             44.7    1e-04
gi|60652323|gb|AAX33234.1|  cytosolic alpha-amylase [Malus x dome  44.7    1e-04
gi|1220453|gb|AAA91884.1|  alpha-amylase                           44.7    1e-04
gi|52851182|emb|CAH58639.1|  alpha-amylase [Plantago major]        43.5    2e-04
gi|68053506|gb|AAY85174.1|  alpha-amylase 2 [Manihot esculenta]    42.7    4e-04
gi|7532799|gb|AAF63239.1|AF153828_1  alpha-amylase [Malus x domes  40.0    0.002 UniGene info
gi|4455243|emb|CAB36742.1|  alpha-amylase-like protein [Arabid...  37.4    0.016
gi|18416465|ref|NP_567714.1|  AMY3 (ALPHA-AMYLASE-LIKE); alpha...  37.4    0.016 UniGene infoGene info
gi|21592633|gb|AAM64582.1|  alpha-amylase-like protein [Arabidops  37.0    0.021 UniGene info
gi|86211227|gb|ABC87289.1|  putative alpha-amylase [Ceratopteris   36.6    0.027
gi|92870751|gb|ABE79993.1|  hypothetical protein MtrDRAFT_AC14...  35.8    0.046
gi|169769|gb|AAA33894.1|  alpha-amylase                            35.4    0.060
gi|11263719|pir||JC7138  alpha-amylase (EC 3.2.1.1) isozyme III -  35.0    0.078
gi|322850|pir||PC1257  alpha-amylase (EC 3.2.1.1) (clone alpha...  35.0    0.078
gi|115476854|ref|NP_001062023.1|  Os08g0473600 [Oryza sativa (...  35.0    0.078 Gene info
gi|115469938|ref|NP_001058568.1|  Os06g0713800 [Oryza sativa (...  34.7    0.10  Gene info
gi|115479549|ref|NP_001063368.1|  Os09g0457600 [Oryza sativa (...  34.7    0.10  Gene info
gi|92887502|gb|ABE88909.1|  Alpha amylase, catalytic region; A...  34.3    0.13 
gi|21670851|dbj|BAC02435.1|  alpha-amylase [Ipomoea nil]           34.3    0.13 
gi|113776|sp|P04748|AMY4_HORVU  Alpha-amylase type B isozyme (...  34.3    0.13 
gi|3769330|dbj|BAA33879.1|  alpha-amylase [Phaseolus vulgaris]     33.9    0.17 
gi|20335|emb|CAA39776.1|  alpha-amylase [Oryza sativa (japonica c  33.5    0.23 
gi|86198284|dbj|BAE47517.2|  alpha-amylase [Hyacinthus orientalis  33.5    0.23 
gi|1065365|pdb|1AMY|   Chain  , Alpha-1,4 Glycan-4-Glucanohydr...  33.5    0.23  Related structures
gi|2851583|sp|P04063|AMY2_HORVU  Alpha-amylase type B isozyme ...  33.5    0.23 
gi|115448879|ref|NP_001048219.1|  Os02g0765400 [Oryza sativa (...  33.1    0.30  Gene info
gi|20167|emb|CAA34516.1|  alpha-amylase [Oryza sativa (japonica c  33.1    0.30 
gi|20339|emb|CAA39778.1|  alpha-amylase [Oryza sativa (japonica c  33.1    0.30 
gi|169753|gb|AAA33885.1|  alpha-amylase (EC 3.2.1.1)               33.1    0.30  UniGene info
gi|115479547|ref|NP_001063367.1|  Os09g0457400 [Oryza sativa (...  33.1    0.30  Gene info
gi|115479551|ref|NP_001063369.1|  Os09g0457800 [Oryza sativa (...  33.1    0.30  Gene info
gi|115448881|ref|NP_001048220.1|  Os02g0765600 [Oryza sativa (...  33.1    0.30  Gene info
gi|46805736|dbj|BAD17123.1|  putative alpha-amylase precursor ...  33.1    0.30  Gene info
gi|30962522|dbj|BAC76729.1|  alpha-amylase [Vigna angularis]       33.1    0.30 
gi|322849|pir||PC1258  alpha-amylase (EC 3.2.1.1) (clone alpha...  33.1    0.30 
gi|92887505|gb|ABE88912.1|  Alpha amylase, catalytic region [Medi  32.7    0.39 
gi|115476856|ref|NP_001062024.1|  Os08g0473900 [Oryza sativa (...  32.7    0.39  Gene info
gi|1220451|gb|AAA91883.1|  alpha-amylase                           32.7    0.39 
gi|169755|gb|AAA33886.1|  alpha-amylase (EC 3.2.1.1)               32.7    0.39  UniGene info
gi|169771|gb|AAA33895.1|  alpha-amylase                            32.7    0.39 
gi|78099755|sp|P27933|AMY3D_ORYSA  Alpha-amylase isozyme 3D pr...  32.7    0.39 
gi|11263717|pir||JC7137  alpha-amylase (EC 3.2.1.1) isozyme I - r  32.7    0.39 
gi|166977|gb|AAA32925.1|  alpha-amylase 1                          32.3    0.51  UniGene infoGene info
gi|458456|gb|AAA16513.1|  alpha amylase precursor                  32.3    0.51 
gi|166985|gb|AAA98615.1|  alpha-amylase                            32.3    0.51 
gi|166979|gb|AAA32926.1|  alpha-amylase 1                          32.3    0.51 
gi|295804|emb|CAA33298.1|  alpha-amylase [Hordeum vulgare] >gi...  32.3    0.51 
gi|228404|prf||1803517A  alpha amylase                             32.0    0.66 
gi|113781|sp|P17859|AMYA_VIGMU  Alpha-amylase precursor (1,4-a...  32.0    0.66 
gi|426482|gb|AAA50161.1|  alpha-amylase                            31.6    0.87  UniGene infoGene info
gi|116058767|emb|CAL54474.1|  alpha amylase 3 (IC) [Ostreococcus   30.8    1.5  
gi|166993|gb|AAA32932.1|  alpha-amylase type B, EC 3.2.1.1         30.8    1.5   UniGene infoGene info
gi|113778|sp|P04750|AMY6_HORVU  Alpha-amylase type B isozyme p...  30.8    1.5  
gi|113775|sp|P08117|AMY3_WHEAT  Alpha-amylase AMY3 precursor (...  30.8    1.5  
gi|60652319|gb|AAX33232.1|  secreted alpha-amylase [Malus x domes  30.0    2.5   UniGene info
gi|31321914|gb|AAM09952.1|  alpha-amylase [Eleusine coracana subs  29.6    3.3  
gi|166981|gb|AAA32927.1|  alpha-amylase 2                          28.9    5.6   UniGene info
gi|71041521|pdb|1RP8|A  Chain A, Crystal Structure Of Barley A...  28.9    5.6   Related structures
gi|41052591|dbj|BAD07933.1|  putative COP1 [Oryza sativa (japo...  28.9    5.6   Gene info
gi|33357016|pdb|1HT6|A  Chain A, Crystal Structure At 1.5a Res...  28.9    5.6   Related structures
gi|113765|sp|P00693|AMY1_HORVU  Alpha-amylase type A isozyme p...  28.9    5.6   Gene info
gi|322847|pir||PC1259  alpha-amylase (EC 3.2.1.1) (clone alpha...  28.9    5.6  
gi|108710545|gb|ABF98340.1|  expressed protein [Oryza sativa (jap  28.5    7.3  
gi|27552541|gb|AAO19364.1|  hypothetical protein [Oryza sativa...  28.5    7.3   Gene info
gi|166983|gb|AAA32928.1|  alpha-amylase 2                          28.5    7.3  
Alignments
>gi|18409378|ref|NP_564977.1| UniGene infoGene info ATAMY3; alpha-amylase [Arabidopsis thaliana] gi|15215738|gb|AAK91414.1| UniGene infoGene info At1g69830/T17F3_14 [Arabidopsis thaliana] gi|23308479|gb|AAN18209.1| UniGene infoGene info At1g69830/T17F3_14 [Arabidopsis thaliana] Length=887 Score = 80.1 bits (196), Expect = 2e-15 Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 0/48 (0%) Frame = -3 Query 273 KAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWELS 130 K+ERDVYAAIID+K+AMKIGPG YEPP+ SQ WS A+EG YKVWE S Sbjct 840 KSERDVYAAIIDEKVAMKIGPGHYEPPNGSQNWSVAVEGRDYKVWETS 887 >gi|60652321|gb|AAX33233.1| plastid alpha-amylase [Actinidia chinensis] Length=895 Score = 80.1 bits (196), Expect = 2e-15 Identities = 38/48 (79%), Positives = 40/48 (83%), Gaps = 0/48 (0%) Frame = -3 Query 273 KAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWELS 130 KAERDVYAAIID K+AMKIGPG YEP S QRWS A+EGN YKVWE S Sbjct 848 KAERDVYAAIIDKKVAMKIGPGFYEPASGPQRWSLAVEGNDYKVWEAS 895 >gi|12325228|gb|AAG52558.1|AC010675_6 putative alpha-amylase; 60344-64829 [Arabidopsis thaliana] Length=826 Score = 80.1 bits (196), Expect = 2e-15 Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 0/48 (0%) Frame = -3 Query 273 KAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWELS 130 K+ERDVYAAIID+K+AMKIGPG YEPP+ SQ WS A+EG YKVWE S Sbjct 779 KSERDVYAAIIDEKVAMKIGPGHYEPPNGSQNWSVAVEGRDYKVWETS 826 >gi|11139274|gb|AAG31655.1| UniGene info PRLI-interacting factor E [Arabidopsis thaliana] Length=120 Score = 80.1 bits (196), Expect = 2e-15 Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 0/48 (0%) Frame = -3 Query 273 KAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWELS 130 K+ERDVYAAIID+K+AMKIGPG YEPP+ SQ WS A+EG YKVWE S Sbjct 73 KSERDVYAAIIDEKVAMKIGPGHYEPPNGSQNWSVAVEGRDYKVWETS 120 >gi|60652317|gb|AAX33231.1| UniGene info plastid alpha-amylase [Malus x domestica] Length=901 Score = 76.3 bits (186), Expect = 3e-14 Identities = 35/51 (68%), Positives = 40/51 (78%), Gaps = 0/51 (0%) Frame = -3 Query 282 KPVKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWELS 130 K KAERDVYAAIID+K+A+KIGPG YEP S Q W+ +LEG YKVWE S Sbjct 851 KITKAERDVYAAIIDEKVAIKIGPGHYEPASGPQNWNKSLEGRDYKVWEAS 901 >gi|115439565|ref|NP_001044062.1| Gene info Os01g0715400 [Oryza sativa (japonica cultivar-group)] gi|113533593|dbj|BAF05976.1| Gene info Os01g0715400 [Oryza sativa (japonica cultivar-group)] Length=876 Score = 53.9 bits (128), Expect = 2e-07 Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 1/51 (1%) Frame = -3 Query 282 KPVKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWELS 130 K +KAE ++YAA ID+++ MKIG G +E PS W A EG YKVWE+S Sbjct 826 KILKAEGNLYAAEIDERVTMKIGAGHFE-PSGPTNWVVAAEGQDYKVWEVS 875 >gi|115458194|ref|NP_001052697.1| Gene info Os04g0403300 [Oryza sativa (japonica cultivar-group)] gi|113564268|dbj|BAF14611.1| Gene info Os04g0403300 [Oryza sativa (japonica cultivar-group)] Length=469 Score = 47.4 bits (111), Expect = 2e-05 Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 2/48 (4%) Frame = -3 Query 282 KPVKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVW 139 K ++A D+Y+AI+DDKL MKIG GS+ P W A G+ Y VW Sbjct 397 KILEASSDLYSAIVDDKLCMKIGDGSWCP--SGPEWKLAASGDRYAVW 442 >gi|38346145|emb|CAE02023.2| Gene info OSJNBb0118P14.5 [Oryza sativa (japonica cultivar-group)] Length=412 Score = 47.4 bits (111), Expect = 2e-05 Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 2/48 (4%) Frame = -3 Query 282 KPVKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVW 139 K ++A D+Y+AI+DDKL MKIG GS+ P W A G+ Y VW Sbjct 365 KILEASSDLYSAIVDDKLCMKIGDGSWCP--SGPEWKLAASGDRYAVW 410 >gi|15222959|ref|NP_177740.1| UniGene infoGene info ATAMY2; alpha-amylase [Arabidopsis thaliana] gi|21537093|gb|AAM61434.1| UniGene infoGene info alpha-amylase, putative [Arabidopsis thaliana] gi|62320476|dbj|BAD94995.1| UniGene infoGene info alpha-amylase like protein [Arabidopsis thaliana] gi|98960989|gb|ABF58978.1| UniGene infoGene info At1g76130 [Arabidopsis thaliana] Length=413 Score = 46.2 bits (108), Expect = 3e-05 Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 2/46 (4%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVW 139 +KAE ++YAAI+ +K+ MK+G GS+ P R W+ A G+ Y VW Sbjct 368 LKAESNLYAAIVGEKICMKLGDGSWCPSGRD--WTLATSGHRYAVW 411 >gi|6573706|gb|AAF17626.1|AC009978_2 T23E18.6 [Arabidopsis thaliana] Length=412 Score = 46.2 bits (108), Expect = 3e-05 Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 2/46 (4%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVW 139 +KAE ++YAAI+ +K+ MK+G GS+ P R W+ A G+ Y VW Sbjct 367 LKAESNLYAAIVGEKICMKLGDGSWCPSGRD--WTLATSGHRYAVW 410 >gi|116059924|emb|CAL55983.1| alpha amylase 2 (IC) [Ostreococcus tauri] Length=468 Score = 44.7 bits (104), Expect = 1e-04 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 3/48 (6%) Frame = -3 Query 282 KPVKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVW 139 K VK E+ +YAA+ID+ L MKIGPG + S W L G + +W Sbjct 415 KIVKCEQTMYAAVIDNNLLMKIGPGHF---SADGNWELQLSGQDFAIW 459 >gi|46360130|gb|AAS88888.1| AAMYI [Ostreococcus tauri] Length=992 Score = 44.7 bits (104), Expect = 1e-04 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 3/48 (6%) Frame = -3 Query 282 KPVKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVW 139 K VK E+ +YAA+ID+ L MKIGPG + S W L G + +W Sbjct 939 KIVKCEQTMYAAVIDNNLLMKIGPGHF---SADGNWELQLSGQDFAIW 983 >gi|60652323|gb|AAX33234.1| cytosolic alpha-amylase [Malus x domestica] Length=414 Score = 44.7 bits (104), Expect = 1e-04 Identities = 21/46 (45%), Positives = 32/46 (69%), Gaps = 2/46 (4%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVW 139 ++A+ ++Y+AII +K+ MKIG GS+ P SR W+ A G+ Y VW Sbjct 369 LEAQPNLYSAIIGEKICMKIGDGSWCPASR--EWTLATSGHRYAVW 412 >gi|1220453|gb|AAA91884.1| alpha-amylase Length=407 Score = 44.7 bits (104), Expect = 1e-04 Identities = 19/47 (40%), Positives = 33/47 (70%), Gaps = 2/47 (4%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 ++A+ ++YAA ID+K+++KIG GS+ P + W+ A G+ Y VW+ Sbjct 362 LEAQPNLYAATIDEKVSVKIGDGSWSPAGK--EWTLATSGHRYAVWQ 406 >gi|52851182|emb|CAH58639.1| alpha-amylase [Plantago major] Length=413 Score = 43.5 bits (101), Expect = 2e-04 Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 2/47 (4%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 ++A+ ++YAA I DK++MKIG GS+ P + W+ A G+ Y VW+ Sbjct 368 IEAQPNLYAANIGDKVSMKIGDGSWCPSGK--EWTLATSGHRYAVWQ 412 >gi|68053506|gb|AAY85174.1| alpha-amylase 2 [Manihot esculenta] Length=407 Score = 42.7 bits (99), Expect = 4e-04 Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 2/47 (4%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 ++A+ ++Y+AII +K+ MKIG GS+ P + W+ A G+ Y VW+ Sbjct 362 LEAQPNLYSAIIGEKICMKIGDGSWCPAGK--EWTLATSGHRYAVWQ 406 >gi|7532799|gb|AAF63239.1|AF153828_1 UniGene info alpha-amylase [Malus x domestica] Length=413 Score = 40.0 bits (92), Expect = 0.002 Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVW 139 ++A+ ++Y+A+I +K+ MKIG GS+ P R W+ A G+ Y VW Sbjct 368 LEAQPNLYSAMIGEKVCMKIGDGSWCPAGR--EWTLATCGHRYAVW 411 >gi|4455243|emb|CAB36742.1| alpha-amylase-like protein [Arabidopsis thaliana] gi|7269350|emb|CAB79409.1| alpha-amylase-like protein [Arabidopsis thaliana] Length=428 Score = 37.4 bits (85), Expect = 0.016 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 0/45 (0%) Frame = -3 Query 270 AERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 AE D+Y A+IDDK+ MKIGP ++ A G + VWE Sbjct 382 AEADLYLAMIDDKVIMKIGPKQDVGTLVPSNFALAYSGLDFAVWE 426 >gi|18416465|ref|NP_567714.1| UniGene infoGene info AMY3 (ALPHA-AMYLASE-LIKE); alpha-amylase [Arabidopsis thaliana] gi|17528998|gb|AAL38709.1| UniGene infoGene info putative alpha-amylase [Arabidopsis thaliana] gi|21436163|gb|AAM51369.1| UniGene infoGene info putative alpha-amylase [Arabidopsis thaliana] Length=423 Score = 37.4 bits (85), Expect = 0.016 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 0/45 (0%) Frame = -3 Query 270 AERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 AE D+Y A+IDDK+ MKIGP ++ A G + VWE Sbjct 377 AEADLYLAMIDDKVIMKIGPKQDVGTLVPSNFALAYSGLDFAVWE 421 >gi|21592633|gb|AAM64582.1| UniGene info alpha-amylase-like protein [Arabidopsis thaliana] Length=423 Score = 37.0 bits (84), Expect = 0.021 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 0/45 (0%) Frame = -3 Query 270 AERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 AE D+Y A+IDDK+ MKIGP ++ A G + +WE Sbjct 377 AEADLYLAMIDDKVIMKIGPKQDVGTLVPSNFALAYSGLDFAIWE 421 >gi|86211227|gb|ABC87289.1| putative alpha-amylase [Ceratopteris richardii] Length=164 Score = 36.6 bits (83), Expect = 0.027 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 6/49 (12%) Frame = -3 Query 270 AERDVYAAIIDDKLAMKIGP----GSYEPPSRSQRWSSALEGNGYKVWE 136 A+ D+Y A I+D + MKIGP G P + W A G+ Y VWE Sbjct 116 ADHDLYVAAINDNVIMKIGPKFDIGDLAP--NLEEWKVAAVGHEYCVWE 162 >gi|92870751|gb|ABE79993.1| hypothetical protein MtrDRAFT_AC148609g31v1 [Medicago truncatula] Length=64 Score = 35.8 bits (81), Expect = 0.046 Identities = 15/30 (50%), Positives = 24/30 (80%), Gaps = 0/30 (0%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSR 187 ++A+++VY+AII +K+ MKIG GS+ P R Sbjct 27 LEAKQNVYSAIIGEKVCMKIGDGSWSPSRR 56 >gi|169769|gb|AAA33894.1| alpha-amylase Length=443 Score = 35.4 bits (80), Expect = 0.060 Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 8/50 (16%) Frame = -3 Query 267 ERDVYAAIIDDKLAMKIGP----GSYEPPSRSQRWSSALEGNGYKVWELS 130 + D Y A ID K+ MKIG S PP + A GNGY VWE S Sbjct 383 DADAYVAEIDGKVVMKIGSRYDVSSLIPPG----FHLAAHGNGYAVWEKS 428 >gi|11263719|pir||JC7138 alpha-amylase (EC 3.2.1.1) isozyme III - rice Length=437 Score = 35.0 bits (79), Expect = 0.078 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 0/47 (0%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 +KAE D+Y A+ID K+ K+GP + GN Y VWE Sbjct 378 LKAEGDIYVAMIDGKVITKLGPRYDAGGIIPSDFHVVAHGNDYCVWE 424 >gi|322850|pir||PC1257 alpha-amylase (EC 3.2.1.1) (clone alphaAmy8-C) - rice (fragment) Length=69 Score = 35.0 bits (79), Expect = 0.078 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 0/47 (0%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 +KAE D+Y A+ID K+ K+GP + GN Y VWE Sbjct 10 LKAEGDIYVAMIDGKVITKLGPRYDAGGIIPSDFHVVAHGNDYCVWE 56 >gi|115476854|ref|NP_001062023.1| Gene info Os08g0473600 [Oryza sativa (japonica cultivar-group)] gi|113683|sp|P27934|AMY3E_ORYSA Alpha-amylase isozyme 3E precursor (1,4-alpha-D-glucan glucanohydrolase) gi|169773|gb|AAA33896.1| Gene info alpha-amylase gi|42407385|dbj|BAD09374.1| Gene info alpha-amylase isozyme 3E precursor [Oryza sativa (japonica cultivar-group)] gi|42408198|dbj|BAD09334.1| Gene info alpha-amylase isozyme 3E precursor [Oryza sativa (japonica cultivar-group)] gi|113623992|dbj|BAF23937.1| Gene info Os08g0473600 [Oryza sativa (japonica cultivar-group)] Length=437 Score = 35.0 bits (79), Expect = 0.078 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 0/47 (0%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 +KAE D+Y A+ID K+ K+GP + GN Y VWE Sbjct 378 LKAEGDIYVAMIDGKVITKLGPRYDAGGIIPSDFHVVAHGNDYCVWE 424 >gi|115469938|ref|NP_001058568.1| Gene info Os06g0713800 [Oryza sativa (japonica cultivar-group)] gi|78099752|sp|P27935|AMY2A_ORYSA Alpha-amylase isozyme 2A precursor (1,4-alpha-D-glucan glucanohydrolase) (Alpha-amylase isozyme C2) gi|53792927|dbj|BAD54103.1| Gene info alpha-amylase isozyme 2A precursor [Oryza sativa (japonica cultivar-group)] gi|113596608|dbj|BAF20482.1| Gene info Os06g0713800 [Oryza sativa (japonica cultivar-group)] Length=445 Score = 34.7 bits (78), Expect = 0.10 Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 8/48 (16%) Frame = -3 Query 267 ERDVYAAIIDDKLAMKIGP----GSYEPPSRSQRWSSALEGNGYKVWE 136 + D Y A ID K+ MKIG S PP + A GNGY VWE Sbjct 383 DADAYVAEIDGKVVMKIGSRYDVSSLIPPG----FHLAAHGNGYAVWE 426 >gi|115479549|ref|NP_001063368.1| Gene info Os09g0457600 [Oryza sativa (japonica cultivar-group)] gi|113680|sp|P27937|AMY3B_ORYSA Alpha-amylase isozyme 3B precursor (1,4-alpha-D-glucan glucanohydrolase) gi|20337|emb|CAA39777.1| Gene info alpha-amylase [Oryza sativa (japonica cultivar-group)] gi|169775|gb|AAA33897.1| alpha-amylase precursor (EC 3.2.1.1) gi|51536197|dbj|BAD38368.1| Gene info Alpha-amylase isozyme 3B precursor (1,4-alpha-D-glucan glucanohydrolase) [Oryza sativa (japonica cultivar-group)] gi|113631601|dbj|BAF25282.1| Gene info Os09g0457600 [Oryza sativa (japonica cultivar-group)] Length=438 Score = 34.7 bits (78), Expect = 0.10 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 0/51 (0%) Frame = -3 Query 282 KPVKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWELS 130 K + AE DVY A+IDDK+ KIG + GN Y +WE S Sbjct 377 KILAAEGDVYVAMIDDKVITKIGTRYDVGNLIPSDFHVVAHGNNYCIWEKS 427 >gi|92887502|gb|ABE88909.1| Alpha amylase, catalytic region; Alpha-amylase beta-sheet, C-terminal [Medicago truncatula] Length=402 Score = 34.3 bits (77), Expect = 0.13 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 8/50 (16%) Frame = -3 Query 270 AERDVYAAIIDDKLAMKIGP----GSYEPPSRSQRWSSALEGNGYKVWEL 133 AE D+Y A I +K+ +KIGP G+ PP+ A G Y VWE+ Sbjct 356 AENDLYMANIGNKIIVKIGPKLDLGNLLPPNA----QVATSGQDYAVWEI 401 >gi|21670851|dbj|BAC02435.1| alpha-amylase [Ipomoea nil] Length=424 Score = 34.3 bits (77), Expect = 0.13 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 8/49 (16%) Frame = -3 Query 270 AERDVYAAIIDDKLAMKIGP----GSYEPPSRSQRWSSALEGNGYKVWE 136 A+ D Y A IDDK+ MKIG G+ PP+ ++ G Y VWE Sbjct 377 ADADAYVAKIDDKVIMKIGSKYDVGNLIPPN----FNLVTSGQDYAVWE 421 >gi|113776|sp|P04748|AMY4_HORVU Alpha-amylase type B isozyme (1,4-alpha-D-glucan glucanohydrolase) (Clone 103) gi|166989|gb|AAA32930.1| UniGene info alpha-amylase type B, EC 3.2.1.1 Length=153 Score = 34.3 bits (77), Expect = 0.13 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 8/51 (15%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGP----GSYEPPSRSQRWSSALEGNGYKVWE 136 ++A+ D+Y A ID K+ +K+GP G+ P + A GN Y VWE Sbjct 105 IEADADLYLAEIDGKVIVKLGPRYDVGNLIPGG----FEGAAHGNDYAVWE 151 >gi|3769330|dbj|BAA33879.1| alpha-amylase [Phaseolus vulgaris] Length=420 Score = 33.9 bits (76), Expect = 0.17 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 0/45 (0%) Frame = -3 Query 270 AERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 AE D+Y A ID+K+ +KIGP + A G Y VWE Sbjct 376 AEGDLYVAKIDNKIMVKIGPKMDLGKLIPSNFHVATSGQDYAVWE 420 >gi|20335|emb|CAA39776.1| alpha-amylase [Oryza sativa (japonica cultivar-group)] Length=440 Score = 33.5 bits (75), Expect = 0.23 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 0/47 (0%) Frame = -3 Query 270 AERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWELS 130 AE D+Y A++D+++ KIGP + GN Y VWE S Sbjct 383 AESDMYVAMVDERVITKIGPRIEVGNIIPSDFHIVAHGNDYCVWEKS 429 >gi|86198284|dbj|BAE47517.2| alpha-amylase [Hyacinthus orientalis] Length=419 Score = 33.5 bits (75), Expect = 0.23 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 0/47 (0%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 + ++ D+Y A++D+K+ +KIGP + G Y VWE Sbjct 372 IASDNDIYVAVVDEKVIVKIGPKVDVWNLVPTEYKLVASGKDYAVWE 418 >gi|1065365|pdb|1AMY| Related structures Chain , Alpha-1,4 Glycan-4-Glucanohydrolase (Alpha-Amylase, High Pi Isozyme (Amy2)) (E.C.3.2.1.1) gi|4699831|pdb|1AVA|A Related structures Chain A, Amy2BASI PROTEIN-Protein Complex From Barley Seed gi|4699832|pdb|1AVA|B Related structures Chain B, Amy2BASI PROTEIN-Protein Complex From Barley Seed gi|5542105|pdb|1BG9| Related structures Chain , Barley Alpha-Amylase With Substrate Analogue Acarbose Length=403 Score = 33.5 bits (75), Expect = 0.23 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 8/51 (15%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGP----GSYEPPSRSQRWSSALEGNGYKVWE 136 ++A+ D+Y A ID K+ +K+GP G+ P + A GN Y VWE Sbjct 355 IEADADLYLAEIDGKVIVKLGPRYDVGNLIPGG----FKVAAHGNDYAVWE 401 >gi|2851583|sp|P04063|AMY2_HORVU Alpha-amylase type B isozyme precursor (1,4-alpha-D-glucan glucanohydrolase) (AMY2-2) (High pI alpha-amylase) gi|166995|gb|AAA98790.1| alpha-amylase type B isozyme precursor [Hordeum vulgare subsp. vulgare] Length=427 Score = 33.5 bits (75), Expect = 0.23 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 8/51 (15%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGP----GSYEPPSRSQRWSSALEGNGYKVWE 136 ++A+ D+Y A ID K+ +K+GP G+ P + A GN Y VWE Sbjct 379 IEADADLYLAEIDGKVIVKLGPRYDVGNLIPGG----FKVAAHGNDYAVWE 425 >gi|115448879|ref|NP_001048219.1| Gene info Os02g0765400 [Oryza sativa (japonica cultivar-group)] gi|113537750|dbj|BAF10133.1| Gene info Os02g0765400 [Oryza sativa (japonica cultivar-group)] Length=58 Score = 33.1 bits (74), Expect = 0.30 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 0/47 (0%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 ++A+ D+Y A ID K+ K+GP + + G+GY VWE Sbjct 10 MEADSDLYLAEIDGKVITKVGPRYDVEHLIPEGFQVVAHGDGYAVWE 56 >gi|20167|emb|CAA34516.1| alpha-amylase [Oryza sativa (japonica cultivar-group)] Length=428 Score = 33.1 bits (74), Expect = 0.30 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 0/47 (0%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 ++A+ D+Y A ID K+ KIGP + + G+GY +WE Sbjct 380 MEADSDLYLAEIDGKVITKIGPRYDVEHLIPEGFQVVAHGDGYAIWE 426 >gi|20339|emb|CAA39778.1| alpha-amylase [Oryza sativa (japonica cultivar-group)] Length=437 Score = 33.1 bits (74), Expect = 0.30 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 0/47 (0%) Frame = -3 Query 270 AERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWELS 130 A+ DVY A+IDDK+ KIG + GN Y VWE S Sbjct 381 ADGDVYVAMIDDKVITKIGTRYDVGNLIPSDFHVVAHGNNYCVWEKS 427 >gi|169753|gb|AAA33885.1| UniGene info alpha-amylase (EC 3.2.1.1) Length=434 Score = 33.1 bits (74), Expect = 0.30 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 0/47 (0%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 ++A+ D+Y A ID K+ KIGP + + G+GY +WE Sbjct 386 MEADSDLYLAEIDGKVITKIGPRYDVEHLIPEGFQVVAHGDGYAIWE 432 >gi|115479547|ref|NP_001063367.1| Gene info Os09g0457400 [Oryza sativa (japonica cultivar-group)] gi|78099753|sp|P27932|AMY3A_ORYSA Alpha-amylase isozyme 3A precursor (1,4-alpha-D-glucan glucanohydrolase) gi|51536195|dbj|BAD38366.1| Gene info Alpha-amylase isozyme 3A precursor (1,4-alpha-D-glucan glucanohydrolase) [Oryza sativa (japonica cultivar-group)] gi|113631600|dbj|BAF25281.1| Gene info Os09g0457400 [Oryza sativa (japonica cultivar-group)] Length=440 Score = 33.1 bits (74), Expect = 0.30 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 0/47 (0%) Frame = -3 Query 270 AERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWELS 130 AE D+Y A++D+++ KIGP + GN Y VWE S Sbjct 383 AESDMYVAMVDERVITKIGPRIDVGNIIPSDFHIVAHGNDYCVWEKS 429 >gi|115479551|ref|NP_001063369.1| Gene info Os09g0457800 [Oryza sativa (japonica cultivar-group)] gi|78099754|sp|P27939|AMY3C_ORYSA Alpha-amylase isozyme 3C precursor (1,4-alpha-D-glucan glucanohydrolase) gi|51536198|dbj|BAD38369.1| Gene info Alpha-amylase isozyme 3C precursor (1,4-alpha-D-glucan glucanohydrolase) [Oryza sativa (japonica cultivar-group)] gi|113631602|dbj|BAF25283.1| Gene info Os09g0457800 [Oryza sativa (japonica cultivar-group)] Length=437 Score = 33.1 bits (74), Expect = 0.30 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 0/47 (0%) Frame = -3 Query 270 AERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWELS 130 A+ DVY A+IDDK+ KIG + GN Y VWE S Sbjct 381 ADGDVYVAMIDDKVITKIGTRYDVGNLIPSDFHVVAHGNNYCVWEKS 427 >gi|115448881|ref|NP_001048220.1| Gene info Os02g0765600 [Oryza sativa (japonica cultivar-group)] gi|78099758|sp|P17654|AMY1_ORYSA Alpha-amylase precursor (1,4-alpha-D-glucan glucanohydrolase) (Isozyme 1B) gi|46805738|dbj|BAD17125.1| Gene info alpha-amylase [Oryza sativa (japonica cultivar-group)] gi|46806065|dbj|BAD17313.1| Gene info alpha-amylase [Oryza sativa (japonica cultivar-group)] gi|113537751|dbj|BAF10134.1| Gene info Os02g0765600 [Oryza sativa (japonica cultivar-group)] Length=434 Score = 33.1 bits (74), Expect = 0.30 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 0/47 (0%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 ++A+ D+Y A ID K+ KIGP + + G+GY +WE Sbjct 386 MEADSDLYLAEIDGKVITKIGPRYDVEHLIPEGFQVVAHGDGYAIWE 432 >gi|46805736|dbj|BAD17123.1| Gene info putative alpha-amylase precursor [Oryza sativa (japonica cultivar-group)] gi|46806063|dbj|BAD17311.1| Gene info putative alpha-amylase precursor [Oryza sativa (japonica cultivar-group)] Length=428 Score = 33.1 bits (74), Expect = 0.30 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 0/47 (0%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 ++A+ D+Y A ID K+ K+GP + + G+GY VWE Sbjct 380 MEADSDLYLAEIDGKVITKVGPRYDVEHLIPEGFQVVAHGDGYAVWE 426 >gi|30962522|dbj|BAC76729.1| alpha-amylase [Vigna angularis] Length=421 Score = 33.1 bits (74), Expect = 0.30 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 0/49 (0%) Frame = -3 Query 282 KPVKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 K + +E D+Y A ID+K+ +KIGP + A G Y VWE Sbjct 373 KILASEGDLYVAKIDNKIMVKIGPKMDLGNLIPSNFHVATSGQDYAVWE 421 >gi|322849|pir||PC1258 alpha-amylase (EC 3.2.1.1) (clone alphaAmy7-C) - rice (fragment) Length=58 Score = 33.1 bits (74), Expect = 0.30 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 0/47 (0%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 ++A+ D+Y A ID K+ KIGP + + G+GY +WE Sbjct 10 MEADSDLYLAEIDGKVITKIGPRYDVEHLIPEGFQVVAHGDGYAIWE 56 >gi|92887505|gb|ABE88912.1| Alpha amylase, catalytic region [Medicago truncatula] Length=421 Score = 32.7 bits (73), Expect = 0.39 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 0/45 (0%) Frame = -3 Query 270 AERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 A+ D+Y A ID+K+ +KIGP + A G Y VWE Sbjct 377 ADADLYVAKIDNKIIVKIGPRMDLGNLIPSNFHVATSGQDYAVWE 421 >gi|115476856|ref|NP_001062024.1| Gene info Os08g0473900 [Oryza sativa (japonica cultivar-group)] gi|113623993|dbj|BAF23938.1| Gene info Os08g0473900 [Oryza sativa (japonica cultivar-group)] Length=476 Score = 32.7 bits (73), Expect = 0.39 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 0/47 (0%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 V A+ D Y A++D+K+ +KIG + + + G Y VWE Sbjct 418 VVADADAYVAVVDEKVMVKIGTRYDVGNAVPSDFHQTVHGKDYSVWE 464 >gi|1220451|gb|AAA91883.1| alpha-amylase Length=349 Score = 32.7 bits (73), Expect = 0.39 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 8/49 (16%) Frame = -3 Query 270 AERDVYAAIIDDKLAMKIGP----GSYEPPSRSQRWSSALEGNGYKVWE 136 ++ D+Y A+I K+ +KIGP G+ PP+ + A G Y VWE Sbjct 302 SDSDLYIAMIHHKIIVKIGPKLDLGNLIPPN----YEVATSGQDYAVWE 346 >gi|169755|gb|AAA33886.1| UniGene info alpha-amylase (EC 3.2.1.1) Length=434 Score = 32.7 bits (73), Expect = 0.39 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 0/47 (0%) Frame = -3 Query 276 VKAERDVYAAIIDDKLAMKIGPGSYEPPSRSQRWSSALEGNGYKVWE 136 V A+ D Y A++D+K+ +KIG + + + G Y VWE Sbjct 376 VVADADAYVAVVDEKVMVKIGTRYDVGNAVPSDFHQTVHGKDYSVWE 422
  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 170
Number of extensions: 1
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 284
Length of database: 101054579
Length adjustment: 64
Effective length of query: 220
Effective length of database: 82920243
Effective search space: 2487607290
Effective search space used: 2487607290
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)