RID=1168927415-14094-164565034474.BLASTQ1, Contig41

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168927415-14094-164565034474.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig41
Length=481

Distribution of 15 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|110738742|dbj|BAF01295.1|  hypothetical protein [Arabidopsis t  73.9    2e-13
gi|8778825|gb|AAF79824.1|AC026875_4  T6D22.8 [Arabidopsis thalian  73.9    2e-13
gi|30680443|ref|NP_172277.2|  unknown protein [Arabidopsis tha...  73.9    2e-13 
gi|15226390|ref|NP_180403.1|  unknown protein [Arabidopsis tha...  37.7    0.019 
gi|22531158|gb|AAM97083.1|  unknown protein [Arabidopsis thali...  37.7    0.019 
gi|15217686|ref|NP_176642.1|  signal transducer [Arabidopsis t...  32.7    0.63  
gi|6633828|gb|AAF19687.1|AC009519_21  F1N19.18 [Arabidopsis thali  32.7    0.63 
gi|92890070|gb|ABE90138.1|  conserved hypothetical protein [Medic  30.8    2.4  
gi|55167999|gb|AAV43867.1|  hypothetical protein [Oryza sativa...  30.8    2.4  
gi|55773830|dbj|BAD72368.1|  hypothetical protein [Oryza sativa (  30.8    2.4  
gi|4309972|gb|AAB81875.2|  hypothetical protein [Arabidopsis t...  29.6    5.3  
gi|15232096|ref|NP_186784.1|  transporter [Arabidopsis thalian...  29.6    5.3   
gi|29027772|dbj|BAC65908.1|  hypothetical protein [Oryza sativa (  29.6    5.3   
gi|46805207|dbj|BAD17687.1|  hypothetical protein [Oryza sativ...  29.3    6.9   
gi|115445109|ref|NP_001046334.1|  Os02g0224300 [Oryza sativa (...  28.9    9.0

Alignments

 

>gi|110738742|dbj|BAF01295.1|  hypothetical protein [Arabidopsis thaliana]
Length=802

 Score = 73.9 bits (180),  Expect = 2e-13
 Identities = 53/143 (37%), Positives = 72/143 (50%), Gaps = 26/143 (18%)
 Frame = -2

Query  480  WFAFQDDRIGNAPVATSPTEVMD-EINLNGTANggnsssddevvvgeeDEL--NESKQLV  310
            WF FQDDR G+ P  T+ +  +D E+N    AN  +S  D+ VV  E+D+L  N     +
Sbjct  581  WFTFQDDRFGSTPSDTAGSNTIDVELNKTYNANTSSSDDDEVVVGEEDDDLTGNPKDNAL  640

Query  309  NGTSTSSAMNGFNNFMSGGDLNPQGERANASHDMGFFRFDTPEN-EDLFGGRPLPEWVGW  133
            N T T+  M                        + FF F+T +  E+ F  +P PEWVGW
Sbjct  641  NTTETNFQMES---------------------PLDFFDFNTSQKAEEAFAEQP-PEWVGW  678

Query  132  GESSDLQVGGSSKNPFLDDDSLD  64
            GE SD+Q  G+  NPF+DDD  D
Sbjct  679  GEPSDMQASGTGLNPFIDDDDDD  701


>gi|8778825|gb|AAF79824.1|AC026875_4  T6D22.8 [Arabidopsis thaliana]
Length=990

 Score = 73.9 bits (180),  Expect = 2e-13
 Identities = 53/143 (37%), Positives = 72/143 (50%), Gaps = 26/143 (18%)
 Frame = -2

Query  480  WFAFQDDRIGNAPVATSPTEVMD-EINLNGTANggnsssddevvvgeeDEL--NESKQLV  310
            WF FQDDR G+ P  T+ +  +D E+N    AN  +S  D+ VV  E+D+L  N     +
Sbjct  769  WFTFQDDRFGSTPSDTAGSNTIDVELNKTYNANTSSSDDDEVVVGEEDDDLTGNPKDNAL  828

Query  309  NGTSTSSAMNGFNNFMSGGDLNPQGERANASHDMGFFRFDTPEN-EDLFGGRPLPEWVGW  133
            N T T+  M                        + FF F+T +  E+ F  +P PEWVGW
Sbjct  829  NTTETNFQMES---------------------PLDFFDFNTSQKAEEAFAEQP-PEWVGW  866

Query  132  GESSDLQVGGSSKNPFLDDDSLD  64
            GE SD+Q  G+  NPF+DDD  D
Sbjct  867  GEPSDMQASGTGLNPFIDDDDDD  889


>gi|30680443|ref|NP_172277.2|  unknown protein [Arabidopsis thaliana]
 gi|22022590|gb|AAM83251.1|  At1g07990/T6D22_5 [Arabidopsis thaliana]
 gi|28416501|gb|AAO42781.1|  At1g07990/T6D22_5 [Arabidopsis thaliana]
Length=802

 Score = 73.9 bits (180),  Expect = 2e-13
 Identities = 53/143 (37%), Positives = 72/143 (50%), Gaps = 26/143 (18%)
 Frame = -2

Query  480  WFAFQDDRIGNAPVATSPTEVMD-EINLNGTANggnsssddevvvgeeDEL--NESKQLV  310
            WF FQDDR G+ P  T+ +  +D E+N    AN  +S  D+ VV  E+D+L  N     +
Sbjct  581  WFTFQDDRFGSTPSDTAGSNTIDVELNKTYNANTSSSDDDEVVVGEEDDDLTGNPKDNAL  640

Query  309  NGTSTSSAMNGFNNFMSGGDLNPQGERANASHDMGFFRFDTPEN-EDLFGGRPLPEWVGW  133
            N T T+  M                        + FF F+T +  E+ F  +P PEWVGW
Sbjct  641  NTTETNFQMES---------------------PLDFFDFNTSQKAEEAFAEQP-PEWVGW  678

Query  132  GESSDLQVGGSSKNPFLDDDSLD  64
            GE SD+Q  G+  NPF+DDD  D
Sbjct  679  GEPSDMQASGTGLNPFIDDDDDD  701


>gi|15226390|ref|NP_180403.1|  unknown protein [Arabidopsis thaliana]
 gi|4432841|gb|AAD20690.1|  hypothetical protein [Arabidopsis thaliana]
Length=826

 Score = 37.7 bits (86),  Expect = 0.019
 Identities = 47/163 (28%), Positives = 69/163 (42%), Gaps = 51/163 (31%)
 Frame = -2

Query  480  WFAFQDDRIGNAPVATSPTEVMDEINLNGTAN---ggnsssddevvvgeeDELNESKQLV  310
            WF FQDDR  N    TS T +++++N+N T N     +S  +  V   E+D+L E  + +
Sbjct  622  WFTFQDDRFSN---PTSDT-MIEDVNMNETTNANDSSSSDDELLVEEEEDDDLTEKSKNI  677

Query  309  NGTSTSSAMNGFNNFMSGGDLNPQGERANASHDMGFFRFDTPENEDLFGGRPLPEWVGWG  130
            + ++ S++ +   N  S                         EN D              
Sbjct  678  SPSNLSTSDSTSINISS-------------------------ENND--------------  698

Query  129  ESSDLQVGGSSKNPFLDDDSLDVNQPSHTETVITEVGSPSNGE  1
            E SD+QV  SS NPF+D   LDV      E VI    SP++ E
Sbjct  699  EPSDMQVTSSSLNPFIDVPMLDVK----PEPVIPN-SSPTSSE  736


>gi|22531158|gb|AAM97083.1|  unknown protein [Arabidopsis thaliana]
 gi|28059493|gb|AAO30063.1|  unknown protein [Arabidopsis thaliana]
Length=503

 Score = 37.7 bits (86),  Expect = 0.019
 Identities = 47/163 (28%), Positives = 69/163 (42%), Gaps = 51/163 (31%)
 Frame = -2

Query  480  WFAFQDDRIGNAPVATSPTEVMDEINLNGTAN---ggnsssddevvvgeeDELNESKQLV  310
            WF FQDDR  N    TS T +++++N+N T N     +S  +  V   E+D+L E  + +
Sbjct  299  WFTFQDDRFSN---PTSDT-MIEDVNMNETTNANDSSSSDDELLVEEEEDDDLTEKSKNI  354

Query  309  NGTSTSSAMNGFNNFMSGGDLNPQGERANASHDMGFFRFDTPENEDLFGGRPLPEWVGWG  130
            + ++ S++ +   N  S                         EN D              
Sbjct  355  SPSNLSTSDSTSINISS-------------------------ENND--------------  375

Query  129  ESSDLQVGGSSKNPFLDDDSLDVNQPSHTETVITEVGSPSNGE  1
            E SD+QV  SS NPF+D   LDV      E VI    SP++ E
Sbjct  376  EPSDMQVTSSSLNPFIDVPMLDVK----PEPVIPN-SSPTSSE  413


>gi|15217686|ref|NP_176642.1|  signal transducer [Arabidopsis thaliana]
 gi|42571997|ref|NP_974089.1|  signal transducer [Arabidopsis thaliana]
 gi|17381206|gb|AAL36415.1|  unknown protein [Arabidopsis thaliana]
 gi|20465811|gb|AAM20010.1|  unknown protein [Arabidopsis thaliana]
Length=647

 Score = 32.7 bits (73),  Expect = 0.63
 Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
 Frame = -2

Query  195  FDTPEN-EDLFG---GRPLPEWVGWGESSDLQ-VGGSSKNPFLDDDSLDVNQPSHTET-V  34
            FD PE   D FG       PE V       LQ +G S K    DDDS D  +PSHT++ V
Sbjct  14   FDAPEVVSDDFGLHLWTSTPESVSTRRRKFLQSMGLSFKKTATDDDSEDELEPSHTDSNV  73

Query  33   ITEVGSPSNG  4
            ++EV + S+G
Sbjct  74   VSEVVNVSSG  83


>gi|6633828|gb|AAF19687.1|AC009519_21  F1N19.18 [Arabidopsis thaliana]
Length=667

 Score = 32.7 bits (73),  Expect = 0.63
 Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
 Frame = -2

Query  195  FDTPEN-EDLFG---GRPLPEWVGWGESSDLQ-VGGSSKNPFLDDDSLDVNQPSHTET-V  34
            FD PE   D FG       PE V       LQ +G S K    DDDS D  +PSHT++ V
Sbjct  14   FDAPEVVSDDFGLHLWTSTPESVSTRRRKFLQSMGLSFKKTATDDDSEDELEPSHTDSNV  73

Query  33   ITEVGSPSNG  4
            ++EV + S+G
Sbjct  74   VSEVVNVSSG  83


>gi|92890070|gb|ABE90138.1|  conserved hypothetical protein [Medicago truncatula]
Length=201

 Score = 30.8 bits (68),  Expect = 2.4
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = +1

Query  328  IQLILLSNYHLIITTAVTTICGAIQVDLIHHLCGGCGHRCITNSVILE  471
            + L+LL   H+++T+ VT  CG  + DL+H +     +R + N  ILE
Sbjct  10   LYLLLLVFSHILLTSPVTCACGEKEKDLLHDI---NTYRKVLNLPILE  54


>gi|55167999|gb|AAV43867.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
 gi|55168292|gb|AAV44158.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=89

 Score = 30.8 bits (68),  Expect = 2.4
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 0/24 (0%)
 Frame = -2

Query  162  GRPLPEWVGWGESSDLQVGGSSKN  91
            GRP  +  GWG S +LQ GG ++N
Sbjct  32   GRPTAKAAGWGGSRELQEGGGARN  55


>gi|55773830|dbj|BAD72368.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=197

 Score = 30.8 bits (68),  Expect = 2.4
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 0/24 (0%)
 Frame = -2

Query  162  GRPLPEWVGWGESSDLQVGGSSKN  91
            GRP  +  GWG S +LQ GG ++N
Sbjct  140  GRPAAKAAGWGGSRELQEGGGARN  163


>gi|4309972|gb|AAB81875.2|  hypothetical protein [Arabidopsis thaliana]
 gi|7267505|emb|CAB77988.1|  hypothetical protein [Arabidopsis thaliana]
Length=779

 Score = 29.6 bits (65),  Expect = 5.3
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
 Frame = +1

Query  169  QVLVFWCVKPE----ESHIMRSICSLTLWIQVSTTHEIVKSIHRTGSRCAIH*LFAFIQL  336
            QVLVFWC++P+    +     S   L L I +S        +    S+C I  L A I L
Sbjct  514  QVLVFWCIQPDIAGGKHEYWSSFAPLPLEIVLSAGQRARDGV----SQCNIFHLAAEISL  569

Query  337  ILLSNYHLIITTAVTTI  387
             L   + +++T+ V T+
Sbjct  570  EL---FGIVLTSLVLTL  583


>gi|15232096|ref|NP_186784.1|  transporter [Arabidopsis thaliana]
 gi|6094559|gb|AAF03501.1|AC010676_11  putative peptide transporter [Arabidopsis thaliana]
Length=563

 Score = 29.6 bits (65),  Expect = 5.3
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
 Frame = +2

Query  95   LLEPPTCK--SEDSPHPTHSGKGLPPNKSS---FSGVSNLK  202
            L E P CK  +ED   P+ + KGL  ++SS   FSG+ N+K
Sbjct  271  LEERPLCKCETEDIETPSTTSKGLEDDESSKTVFSGIDNVK  311


>gi|29027772|dbj|BAC65908.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=150

 Score = 29.6 bits (65),  Expect = 5.3
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query  367  TTAVTTICGAIQVDLIHHLC-GGCGHRCITNSVILECK  477
            T A TT C A+ V+ +  +  G CGHRC+    I++ +
Sbjct  23   TAATTTNCCAVCVEPLEWVAIGPCGHRCVCARCIVQVR  60


>gi|46805207|dbj|BAD17687.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
 gi|49387959|dbj|BAD25057.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=256

 Score = 29.3 bits (64),  Expect = 6.9
 Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 13/81 (16%)
 Frame = -2

Query  291  SAMNGFNNFMSGGDLNPQGERANASHDMGFFRFDTPENEDLFGGRPLPEWVGWGESSDLQ  112
            SA  G  +  S GD    G+R +    +GF             G P P+  G G S   Q
Sbjct  68   SAARGGGDGDSDGDGGSGGDRRSGGRALGF-------------GTPTPDPTGGGTSVPAQ  114

Query  111  VGGSSKNPFLDDDSLDVNQPS  49
             G     P    D  D  QP+
Sbjct  115  PGKRMAQPETRGDGRDSRQPT  135


>gi|115445109|ref|NP_001046334.1|  Os02g0224300 [Oryza sativa (japonica cultivar-group)]
 gi|46805645|dbj|BAD17064.1|  high molecular weight glutenin subunit x-like protein [Oryza 
sativa (japonica cultivar-group)]
 gi|113535865|dbj|BAF08248.1|  Os02g0224300 [Oryza sativa (japonica cultivar-group)]
Length=421

 Score = 28.9 bits (63),  Expect = 9.0
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +2

Query  74   SSSRNGFLLEPPTCKSEDSP---HPTHSGKGLPPNKSSFSGVSNLKNPIS*EAFALSPCG  244
            + S  G+  +PPT  +   P       SG G PP ++ +      +   S  ++   P G
Sbjct  244  AGSHPGYSSQPPTSAASSYPVQGSAPQSGYGAPPPQTGYGTQPQPQGGYSQGSYGAPPQG  303

Query  245  FKSPP  259
             K+PP
Sbjct  304  QKAPP  308

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 322
Number of extensions: 7
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 481
Length of database: 101054579
Length adjustment: 104
Effective length of query: 377
Effective length of database: 71586283
Effective search space: 4008831848
Effective search space used: 4008831848
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 63 (28.9 bits)