Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168927495-6690-160948413843.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig45 Length=534
Score E Sequences producing significant alignments: (Bits) Value gi|115479501|ref|NP_001063344.1| Os09g0453400 [Oryza sativa (... 203 3e-52 gi|1946373|gb|AAB63091.1| putative signal peptidase I [Arabidops 202 8e-52 gi|30684587|ref|NP_180603.2| peptidase/ serine-type peptidase... 202 8e-52 gi|71535009|gb|AAZ32902.1| chloroplast thylakoidal processing pe 200 3e-51 gi|21553622|gb|AAM62715.1| chloroplast thylakoidal processing... 194 2e-49 gi|15222236|ref|NP_172171.1| peptidase/ serine-type peptidase... 194 2e-49 gi|115455549|ref|NP_001051375.1| Os03g0765200 [Oryza sativa (... 192 8e-49 gi|30687572|ref|NP_189102.2| peptidase/ serine-type peptidase... 175 1e-43 gi|9294054|dbj|BAB02011.1| unnamed protein product [Arabidopsis 175 1e-43 gi|25082936|gb|AAN72018.1| chloroplast thylakoidal processing... 172 5e-43 gi|115445459|ref|NP_001046509.1| Os02g0267000 [Oryza sativa (... 166 6e-41 gi|60543315|gb|AAX22255.1| At1g23470 [Arabidopsis thaliana] 64.3 2e-10 gi|108711246|gb|ABF99041.1| signal peptidase I family protein... 58.5 1e-08 gi|51969682|dbj|BAD43533.1| hypothetical protein [Arabidopsis... 58.2 2e-08 gi|4056468|gb|AAC98041.1| Contains similarity to gb|X66426 po... 57.8 2e-08 gi|42571613|ref|NP_973897.1| serine-type peptidase [Arabidops... 57.8 2e-08 gi|15231994|ref|NP_187510.1| peptidase/ serine-type peptidase... 55.8 9e-08 gi|115450727|ref|NP_001048964.1| Os03g0147900 [Oryza sativa (... 51.6 2e-06 gi|15220621|ref|NP_174289.1| peptidase/ transcription factor ... 51.6 2e-06 gi|30695525|ref|NP_175758.2| peptidase/ serine-type peptidase... 50.4 4e-06 gi|90265115|emb|CAC09477.2| H0806H05.10 [Oryza sativa (indica cu 50.1 5e-06 gi|92890617|gb|ABE90427.1| Peptidase S26A, signal peptidase I [M 48.9 1e-05 gi|115457068|ref|NP_001052134.1| Os04g0165600 [Oryza sativa (... 48.9 1e-05 gi|8778577|gb|AAF79585.1|AC007945_5 F28C11.10 [Arabidopsis thali 47.4 3e-05 gi|115486295|ref|NP_001068291.1| Os11g0620000 [Oryza sativa (... 47.0 4e-05 gi|108864588|gb|ABA94772.2| signal peptidase I family protein... 40.4 0.004 gi|15451599|gb|AAK98723.1|AC090485_2 Putative signal peptidas... 40.0 0.005 gi|22208508|gb|AAM94323.1| unknown protein [Sorghum bicolor] 36.2 0.072 gi|3746062|gb|AAC63837.1| hypothetical protein [Arabidopsis thal 35.0 0.16 gi|30684839|ref|NP_180672.2| unknown protein [Arabidopsis tha... 35.0 0.16 gi|38344766|emb|CAE01583.2| OSJNBa0068L06.9 [Oryza sativa (ja... 33.5 0.47 gi|15221421|ref|NP_172110.1| unknown protein [Arabidopsis tha... 31.2 2.3 gi|8844125|gb|AAF80217.1|AC025290_6 Contains similarity to an... 31.2 2.3 gi|20197833|gb|AAM15272.1| putative Mutator-like transposase ... 30.8 3.0 gi|77553326|gb|ABA96122.1| NB-ARC domain containing protein [... 30.4 4.0 gi|50725141|dbj|BAD33758.1| putative receptor kinase 5 [Oryza... 30.4 4.0 gi|115463579|ref|NP_001055389.1| Os05g0378800 [Oryza sativa (... 30.0 5.2 gi|115468702|ref|NP_001057950.1| Os06g0585900 [Oryza sativa (... 29.3 8.8 gi|115457112|ref|NP_001052156.1| Os04g0174900 [Oryza sativa (... 29.3 8.8 gi|23928440|gb|AAN40026.1| hypothetical protein [Zea mays] 29.3 8.8 gi|24634838|gb|AAN63212.1| maturase K [Haniffia albiflora] 29.3 8.8 gi|50726549|dbj|BAD34183.1| putative protein kinase Xa21 [Ory... 29.3 8.8
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 349 Number of extensions: 12 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 534 Length of database: 101054579 Length adjustment: 106 Effective length of query: 428 Effective length of database: 71019585 Effective search space: 5113410120 Effective search space used: 5113410120 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)