Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168927866-23218-38902222492.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig53 Length=318
Score E Sequences producing significant alignments: (Bits) Value gi|6015065|sp|O23755|EF2_BETVU Elongation factor 2 (EF-2) >gi... 212 3e-55 gi|92887256|gb|ABE88774.1| Translation factor; Elongation fac... 210 1e-54 gi|4650842|dbj|BAA77028.1| elongation factor 2 [Lithospermum ery 210 1e-54 gi|115446385|ref|NP_001046972.1| Os02g0519900 [Oryza sativa (... 209 2e-54 gi|115456914|ref|NP_001052057.1| Os04g0118400 [Oryza sativa (... 209 2e-54 gi|71535003|gb|AAZ32899.1| elongation factor 2 [Medicago sativa] 209 2e-54 gi|62321134|dbj|BAD94254.1| hypothetical protein [Arabidopsis th 206 3e-53 gi|62321142|dbj|BAD94268.1| hypothetical protein [Arabidopsis th 206 3e-53 gi|29824421|gb|AAP04170.1| putative elongation factor [Arabid... 206 3e-53 gi|6056373|gb|AAF02837.1|AC009894_8 elongation factor EF-2 [Arab 206 3e-53 gi|23397287|gb|AAN31925.1| putative elongation factor [Arabidops 206 3e-53 gi|30696056|ref|NP_849818.1| LOS1; GTP binding / translation ... 206 3e-53 gi|115439863|ref|NP_001044211.1| Os01g0742200 [Oryza sativa (... 204 1e-52 gi|92887257|gb|ABE88775.1| Elongation factor Tu, domain 2; Tr... 193 1e-49 gi|119167|sp|P28996|EF2_CHLKE Elongation factor 2 (EF-2) >gi|... 193 2e-49 gi|71534926|gb|AAZ32867.1| elongation factor 2 [Medicago sativa] 192 3e-49 gi|81157943|dbj|BAE48222.1| elongation factor 2 [Chlorella pyren 181 7e-46 gi|116054850|emb|CAL56927.1| Mitochondrial elongation factor (IS 176 2e-44 gi|32400836|gb|AAP80650.1|AF475129_1 elongation factor [Triticum 169 3e-42 gi|115439649|ref|NP_001044104.1| Os01g0723000 [Oryza sativa (... 166 2e-41 gi|10798636|emb|CAC12818.1| elongation factor 2 [Nicotiana tabac 132 3e-31 gi|58500286|gb|AAW78583.1| elongation factor 2 [Triticum monococ 130 2e-30 gi|115468878|ref|NP_001058038.1| Os06g0608300 [Oryza sativa (... 121 8e-28 gi|92872219|gb|ABE80951.1| Translation factor; Elongation fac... 120 2e-27 gi|62320053|dbj|BAD94207.1| elongation factor like protein [Arab 116 2e-26 gi|15221423|ref|NP_172112.1| GTP binding / translation elonga... 116 2e-26 gi|15238745|ref|NP_197905.1| GTP binding / translation elonga... 114 1e-25 gi|116058602|emb|CAL54309.1| Mitochondrial translation elonga... 112 4e-25 gi|115446589|ref|NP_001047074.1| Os02g0543300 [Oryza sativa (... 65.9 4e-11 gi|115454371|ref|NP_001050786.1| Os03g0650700 [Oryza sativa (... 65.1 7e-11 gi|62318773|dbj|BAD93810.1| hypothetical protein [Arabidopsis th 63.9 2e-10 gi|116056337|emb|CAL56720.1| Mitochondrial elongation factor (IS 60.8 1e-09 gi|15228918|ref|NP_188938.1| GTP binding / translation factor... 56.6 2e-08 gi|9294187|dbj|BAB02089.1| elongation factor EF-2 [Arabidopsis t 56.6 2e-08 gi|92877074|gb|ABE84294.1| Elongation factor Tu, domain 2; Tr... 55.1 7e-08 gi|92872951|gb|ABE81469.1| Elongation factor Tu, domain 2 [Me... 43.9 2e-04 gi|115459660|ref|NP_001053430.1| Os04g0538100 [Oryza sativa (... 43.5 2e-04 gi|38567873|emb|CAE03022.3| OSJNBa0091D06.15 [Oryza sativa (japo 43.5 2e-04 gi|13936347|gb|AAK40271.1| translation elongation factor EF-G... 43.5 2e-04 gi|13936363|gb|AAK40279.1| translation elongation factor EF-G... 43.5 2e-04 gi|14532624|gb|AAK64040.1| unknown protein [Arabidopsis thaliana 43.5 2e-04 gi|18407650|ref|NP_564801.1| GTP binding / translation elonga... 43.5 2e-04 gi|62320893|dbj|BAD93878.1| elongation factor G [Arabidopsis tha 43.1 3e-04 gi|461999|sp|P34811|EFGC_SOYBN Elongation factor G, chloroplast 43.1 3e-04 gi|2119927|pir||S35701 translation elongation factor EF-G, chlor 43.1 3e-04 gi|402753|emb|CAA50573.1| translation elongation factor EF-G [Gl 43.1 3e-04 gi|82907701|gb|ABB93052.1| translation elongation factor G [Aegi 41.6 8e-04 gi|82907717|gb|ABB93060.1| translation elongation factor G [Aegi 41.6 8e-04 gi|82907735|gb|ABB93069.1| translation elongation factor G [T... 41.6 8e-04 gi|82907709|gb|ABB93056.1| translation elongation factor G [Aegi 41.6 8e-04 gi|61378740|gb|AAX45018.1| translation elongation factor G [P... 41.6 8e-04 gi|61378694|gb|AAX44995.1| translation elongation factor G [Brom 41.6 8e-04 gi|61378750|gb|AAX45023.1| translation elongation factor G [A... 41.6 8e-04 gi|61378724|gb|AAX45010.1| translation elongation factor G [Hord 41.6 8e-04 gi|61378696|gb|AAX44996.1| translation elongation factor G [Agro 41.6 8e-04 gi|61378716|gb|AAX45006.1| translation elongation factor G [F... 41.6 8e-04 gi|61378692|gb|AAX44994.1| translation elongation factor G [Brom 41.6 8e-04 gi|61378712|gb|AAX45004.1| translation elongation factor G [E... 41.6 8e-04 gi|61378742|gb|AAX45019.1| translation elongation factor G [P... 41.6 8e-04 gi|61378698|gb|AAX44997.1| translation elongation factor G [A... 41.6 8e-04 gi|61378730|gb|AAX45013.1| translation elongation factor G [H... 41.6 8e-04 gi|61378718|gb|AAX45007.1| translation elongation factor G [H... 41.6 8e-04 gi|61378706|gb|AAX45001.1| translation elongation factor G [Aegi 41.6 8e-04 gi|61378744|gb|AAX45020.1| translation elongation factor G [Psat 41.6 8e-04 gi|38504705|gb|AAR22927.1| translation elongation factor EF-G... 41.6 8e-04 gi|116059008|emb|CAL54715.1| Mitochondrial elongation factor (IS 39.7 0.003 gi|61378700|gb|AAX44998.1| translation elongation factor G [Aust 39.3 0.004 gi|15225397|ref|NP_182029.1| GTP binding / translation elonga... 37.4 0.016 gi|15220073|ref|NP_175135.1| GTP binding / translation elonga... 37.4 0.016 gi|92894526|gb|ABE92268.1| Translation factor; Elongation fac... 35.8 0.046 gi|116058950|emb|CAL54657.1| Mitochondrial translation elonga... 35.0 0.078 gi|110742891|dbj|BAE99343.1| putative mitochondrial elongation f 33.5 0.23 gi|14091865|gb|AAK53868.1|AC016781_22 Mitochondrial elongatio... 33.5 0.23 gi|115453801|ref|NP_001050501.1| Os03g0565500 [Oryza sativa (... 33.5 0.23 gi|10129885|dbj|BAB13514.1| mitochondrial elongation factor G... 33.5 0.23 gi|38327302|gb|AAR17698.1| GTP-binding protein TypA [Trifolium p 32.3 0.50 gi|92892027|gb|ABE91045.1| elongation factor G [Medicago truncat 32.0 0.66 gi|30684509|ref|NP_851035.1| GTP binding / translation elonga... 31.6 0.86 gi|16649147|gb|AAL24425.1| GTP-binding protein typA (tyrosine... 31.6 0.86 gi|30684514|ref|NP_568289.3| GTP binding / translation elonga... 31.6 0.86 gi|9758030|dbj|BAB08691.1| GTP-binding protein typA (tyrosine... 31.6 0.86 gi|422015|pir||S30607 translation elongation factor eEF-2 - whea 30.4 1.9 gi|115445587|ref|NP_001046573.1| Os02g0285800 [Oryza sativa (... 29.6 3.3 gi|115448097|ref|NP_001047828.1| Os02g0699000 [Oryza sativa (... 28.9 5.6 gi|110737000|dbj|BAF00455.1| hypothetical protein [Arabidopsis t 28.5 7.3 gi|115483863|ref|NP_001065593.1| Os11g0117700 [Oryza sativa (... 28.5 7.3 gi|15240110|ref|NP_201488.1| ASL1 [Arabidopsis thaliana] >gi|... 28.5 7.3 gi|34420134|gb|AAQ67412.1| (+)-larreatricin hydroxylase [Larrea 28.1 9.5 gi|629464|pir||B48210 ezy-1 protein precursor (clone 10) - Chlam 28.1 9.5 gi|585115|sp|Q08354|EZY1_CHLRE Ezy-1 protein precursor >gi|29918 28.1 9.5
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 216 Number of extensions: 6 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 318 Length of database: 101054579 Length adjustment: 75 Effective length of query: 243 Effective length of database: 79803404 Effective search space: 2473905524 Effective search space used: 2473905524 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)