RID=1168927984-29451-108277722869.BLASTQ1, Contig59

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168927984-29451-108277722869.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Score E Sequences producing significant alignments: (Bits) Value gi|15226936|ref|NP_178339.1| ATPP2-B8 [Arabidopsis thaliana] ... 31.2 1.1

gi|312944|emb|CAA47329.1| cysteine synthase [Spinacia oleracea] 29.6 3.3 gi|464226|gb|AAA16973.1| O-acetylserine-(thiol)-lyase 29.6 3.3 gi|12644209|sp|P32260|CYSKP_SPIOL Cysteine synthase, chloropl... 29.6 3.3 gi|303902|dbj|BAA03542.1| cysteine synthase [Spinacia oleracea] 29.6 3.3

Alignments

 

>gi|15226936|ref|NP_178339.1|  ATPP2-B8 [Arabidopsis thaliana]
 gi|3894166|gb|AAC78516.1|  putative phloem-specific lectin [Arabidopsis thaliana]
Length=305

 Score = 31.2 bits (69),  Expect = 1.1
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +1

Query  37   RTWTYSLDDFSNNVRDVDDPPITCEALIVPYTSAGDS-LSPLISKTSIVALXS  192
            +T   S  D S+ V ++DD P  C ++IV +TS  D+ +   +SKT   A+ S
Sbjct  20   KTLRLSASDKSHGVAELDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKS  72


>gi|312944|emb|CAA47329.1|  cysteine synthase [Spinacia oleracea]
Length=383

 Score = 29.6 bits (65),  Expect = 3.3
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
 Frame = +1

Query  70   NNVRDVDDPPITCEA--LIVPYTSAG----DSLSPLISKTSIVALXSLS  198
            NN + V   PITC+A  L  P T  G    + +S LI KT +V L ++S
Sbjct  39   NNFKKVSSSPITCKAVSLSPPSTIEGLNIAEDVSQLIGKTPMVYLNNVS  87


>gi|464226|gb|AAA16973.1|  O-acetylserine-(thiol)-lyase
Length=390

 Score = 29.6 bits (65),  Expect = 3.3
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
 Frame = +1

Query  70   NNVRDVDDPPITCEA--LIVPYTSAG----DSLSPLISKTSIVALXSLS  198
            NN + V   PITC+A  L  P T  G    + +S LI KT +V L ++S
Sbjct  39   NNFKKVSSSPITCKAVSLSPPSTIEGLNIAEDVSQLIGKTPMVYLNNVS  87


>gi|12644209|sp|P32260|CYSKP_SPIOL  Cysteine synthase, chloroplast precursor (O-acetylserine sulfhydrylase) 
(O-acetylserine (Thiol)-lyase) (CSase B) (CS-B) (OAS-TL 
B)
Length=383

 Score = 29.6 bits (65),  Expect = 3.3
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
 Frame = +1

Query  70   NNVRDVDDPPITCEA--LIVPYTSAG----DSLSPLISKTSIVALXSLS  198
            NN + V   PITC+A  L  P T  G    + +S LI KT +V L ++S
Sbjct  39   NNFKKVSSSPITCKAVSLSPPSTIEGLNIAEDVSQLIGKTPMVYLNNVS  87


>gi|303902|dbj|BAA03542.1|  cysteine synthase [Spinacia oleracea]
Length=383

 Score = 29.6 bits (65),  Expect = 3.3
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
 Frame = +1

Query  70   NNVRDVDDPPITCEA--LIVPYTSAG----DSLSPLISKTSIVALXSLS  198
            NN + V   PITC+A  L  P T  G    + +S LI KT +V L ++S
Sbjct  39   NNFKKVSSSPITCKAVSLSPPSTIEGLNIAEDVSQLIGKTPMVYLNNVS  87

Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 198 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 247 Length of database: 101054579 Length adjustment: 53 Effective length of query: 194 Effective length of database: 86037082 Effective search space: 2495075378 Effective search space used: 2495075378 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)

Distribution of 5 Blast Hits on the Query Sequence