Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168926497-30666-210474777522.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig6 Length=637
Score E Sequences producing significant alignments: (Bits) Value gi|3851001|gb|AAC72193.1| pyruvate dehydrogenase E1 beta subunit 380 2e-105 gi|115477529|ref|NP_001062360.1| Os08g0536000 [Oryza sativa (... 379 5e-105 gi|3850999|gb|AAC72192.1| pyruvate dehydrogenase E1 beta subunit 375 6e-104 gi|3851003|gb|AAC72194.1| pyruvate dehydrogenase E1 beta subunit 375 7e-104 gi|115480067|ref|NP_001063627.1| Os09g0509200 [Oryza sativa (... 370 2e-102 gi|15241286|ref|NP_199898.1| pyruvate dehydrogenase (acetyl-t... 369 5e-102 gi|520478|gb|AAA52225.1| pyruvate dehydrogenase E1 beta subun... 366 4e-101 gi|1709454|sp|P52904|ODPB_PEA Pyruvate dehydrogenase E1 compo... 363 2e-100 gi|116058357|emb|CAL53546.1| Branched chain alpha-keto acid d... 304 2e-82 gi|22711921|ref|NP_683783.1| pyruvate dehydrogenase E1 compon... 169 8e-42 gi|108773225|ref|YP_635737.1| beta subunit of pyruvate dehydr... 158 1e-38 gi|2982328|gb|AAC32149.1| pyruvate dehydrogenase E1 beta subunit 158 1e-38 gi|108710070|gb|ABF97865.1| Pyruvate dehydrogenase E1 compone... 157 4e-38 gi|115454325|ref|NP_001050763.1| Os03g0645100 [Oryza sativa (... 157 4e-38 gi|115489596|ref|NP_001067285.1| Os12g0616900 [Oryza sativa (... 155 9e-38 gi|2454184|gb|AAB86804.1| pyruvate dehydrogenase E1 beta subu... 155 1e-37 gi|15220670|ref|NP_174304.1| PDH-E1 BETA (PYRUVATE DEHYDROGEN... 155 1e-37 gi|21593379|gb|AAM65328.1| putative pyruvate dehydrogenase E1... 154 2e-37 gi|15226781|ref|NP_181006.1| transketolase [Arabidopsis thali... 154 2e-37 gi|108796799|ref|YP_636456.1| beta subunit of pyruvate dehydr... 154 3e-37 gi|108796697|ref|YP_636504.1| beta subunit of pyruvate dehydr... 149 1e-35 gi|11466393|ref|NP_038396.1| pyruvate dehydrogenase E1 compon... 147 4e-35 gi|115470781|ref|NP_001058989.1| Os07g0170100 [Oryza sativa (... 141 2e-33 gi|15231242|ref|NP_187954.1| DIN4 (DARK INDUCIBLE 4); 3-methy... 138 1e-32 gi|15222731|ref|NP_175947.1| BCDH BETA1 (BRANCHED-CHAIN ALPHA... 137 3e-32 gi|3746568|gb|AAC64005.1| branched-chain alpha-keto acid deca... 137 3e-32 gi|92871781|gb|ABE80687.1| TonB box, N-terminal [Medicago trunca 130 4e-30 gi|116055692|emb|CAL57777.1| Branched chain alpha-keto acid d... 110 3e-24 gi|4530522|gb|AAD22077.1| pyruvate dehydrogenase E1 beta subunit 89.0 1e-17 gi|92871786|gb|ABE80692.1| pyruvate dehydrogenase e1 componen... 84.0 4e-16 gi|4185881|emb|CAA07554.1| 1-deoxy-D-xylulose-5-phosphate syn... 63.5 6e-10 gi|3114573|gb|AAC33513.1| 1-deoxyxylulose-5-phosphate synthase [ 59.7 9e-09 gi|46361691|gb|AAS89341.1| 1-deoxy-D-xylulose-5-phosphate syntha 58.2 3e-08 gi|40317612|gb|AAP14354.2| 1-deoxy-D-xylulose-5-phosphate syn... 56.2 1e-07 gi|14334452|gb|AAK59424.1| putative DEF (CLA1) protein [Arabidop 56.2 1e-07 gi|16226685|gb|AAL16232.1|AF428463_1 AT4g15560/dl3821w [Arabidop 56.2 1e-07 gi|1399261|gb|AAC49368.1| DEF 56.2 1e-07 gi|25311124|pir||T52289 probable transketolase [imported] - A... 56.2 1e-07 gi|15234642|ref|NP_193291.1| CLA1 (CLOROPLASTOS ALTERADOS 1) ... 56.2 1e-07 gi|119358853|emb|CAL52263.2| Dxs 1-deoxy-D-xylulose-5-phospha... 55.5 2e-07 gi|46361693|gb|AAS89342.1| 1-deoxy-D-xylulose-5-phosphate syntha 55.5 2e-07 gi|92869038|gb|ABE78977.1| Deoxyxylulose-5-phosphate synthase [M 55.1 2e-07 gi|21322713|emb|CAD22530.1| 1-deoxy-D-xylulose 5-phosphate synth 55.1 2e-07 gi|21322715|emb|CAD22531.1| 1-deoxy-D-xylulose 5-phosphate synth 54.3 4e-07 gi|51234083|gb|AAT97962.1| putative 1-deoxy-D-xylulose 5-phos... 53.9 5e-07 gi|56785668|gb|AAW28999.1| 1-deoxy-D-xylulose-5-phosphate syntha 53.1 8e-07 gi|5059160|gb|AAD38941.1|AF143812_1 1-D-deoxyxylulose 5-phosp... 53.1 8e-07 gi|11691594|emb|CAA09804.2| 1-deoxyxylulose 5-phosphate synthase 53.1 8e-07 gi|35187002|gb|AAQ84169.1| 1-deoxy-D-xylulose 5-phosphate syn... 52.8 1e-06 gi|7446974|pir||D71420 hypothetical protein - Arabidopsis thalia 52.8 1e-06 gi|10178920|emb|CAC08458.1| 1-D-desoxyxylulose 5-phosphate sy... 52.8 1e-06 gi|30315812|sp|O78328|DXS_CAPAN Probable 1-deoxy-D-xylulose-5... 52.8 1e-06 gi|46488696|gb|AAS99588.1| chloroplast 1-deoxy-D-xylulose-5-p... 52.4 1e-06 gi|91771913|gb|ABE60813.1| CLA1-like protein [Brassica rapa] 52.0 2e-06 gi|94421690|gb|ABF18929.1| putative 1-deoxy-D-xylulose 5-phos... 51.6 2e-06 gi|115466348|ref|NP_001056773.1| Os06g0142900 [Oryza sativa (... 51.6 2e-06 gi|21593831|gb|AAM65798.1| 1-D-deoxyxylulose 5-phosphate synt... 51.6 2e-06 gi|30686265|ref|NP_850620.1| 1-deoxy-D-xylulose-5-phosphate synt 51.6 2e-06 gi|18403027|ref|NP_566686.1| 1-deoxy-D-xylulose-5-phosphate synt 51.6 2e-06 gi|55295806|dbj|BAD67657.1| putative 1-deoxy-D-xylulose 5-pho... 51.6 2e-06 gi|51969370|dbj|BAD43377.1| putative 1-D-deoxyxylulose 5-phos... 51.6 2e-06 gi|11994386|dbj|BAB02345.1| 1-deoxyxylulose-5-phosphate synth... 51.6 2e-06 gi|51970458|dbj|BAD43921.1| putative 1-D-deoxyxylulose 5-phos... 51.2 3e-06 gi|8000868|gb|AAD56390.2|AF182286_1 1-deoxy-D-xylulose-5-phospha 50.8 4e-06 gi|87299429|dbj|BAE79547.1| 1-deoxyxylulose 5-phosphate synth... 50.8 4e-06 gi|61656097|gb|AAX49359.1| 1-deoxy-D-xylulose 5-phosphate syntha 50.4 5e-06 gi|92884268|gb|ABE87288.1| Transketolase, C-terminal-like [Medic 50.1 7e-06 gi|15239030|ref|NP_196699.1| 1-deoxy-D-xylulose-5-phosphate s... 49.7 9e-06 gi|55733939|gb|AAV59446.1| putative 1-deoxy-D-xylulose 5-phos... 49.3 1e-05 gi|115463849|ref|NP_001055524.1| Os05g0408900 [Oryza sativa (... 49.3 1e-05 gi|2612941|gb|AAB88295.1| CLA1 transketolase-like protein [Oryza 49.3 1e-05 gi|9971824|gb|AAG10432.1| 1-deoxy-D-xylulose-5-phosphate synthas 48.9 2e-05 gi|55295805|dbj|BAD67656.1| 1-deoxy-D-xylulose 5-phosphate sy... 48.9 2e-05 gi|30144404|gb|AAP14353.1| 1-deoxy-D-xylulose-5-phosphate syn... 48.5 2e-05 gi|22797427|emb|CAD22155.2| 1-deoxy-D-xylulose 5-phosphate synth 48.5 2e-05 gi|115470975|ref|NP_001059086.1| Os07g0190000 [Oryza sativa (... 47.0 6e-05 gi|11493204|emb|CAC17468.1| 1-deoxy-D-xylulose 5-phosphate synth 47.0 6e-05 gi|46410858|gb|AAS94123.1| putative 1-deoxy-D-xylulose 5-phos... 46.6 8e-05 gi|117553508|gb|ABK35283.1| deoxyxylulose-5-phosphate synthas... 46.2 1e-04 gi|16930804|gb|AAL32062.1|AF443590_1 deoxy-D-xylulose-5-phosphat 45.4 2e-04 gi|40849969|gb|AAR95699.1| putative 1-D-deoxyxylulose 5-phosphat 42.7 0.001 gi|55792499|gb|AAV65347.1| plastid pyruvate dehydrogenase E1 ... 42.4 0.001 gi|118722794|gb|ABL10109.1| 1-D-deoxyxylulose 5-phosphate syntha 40.0 0.007 gi|61656095|gb|AAX49358.1| 1-deoxy-D-xylulose 5-phosphate syntha 39.7 0.009 gi|62319629|dbj|BAD95119.1| pyruvate dehydrogenase E1 compone... 35.8 0.14 gi|115448697|ref|NP_001048128.1| Os02g0749800 [Oryza sativa (... 34.3 0.39 gi|46390202|dbj|BAD15633.1| mitochondrial transcription termi... 34.3 0.39 gi|115461961|ref|NP_001054580.1| Os05g0136800 [Oryza sativa (... 32.0 2.0 gi|18411885|ref|NP_565175.1| RNA binding / nucleic acid bindi... 31.2 3.3 gi|42572157|ref|NP_974169.1| RNA binding / nucleic acid bindi... 31.2 3.3 gi|8572667|gb|AAF77117.1|AF230077_1 BotdiFLO protein [Botrychium 30.4 5.7 gi|8052542|gb|AAF71806.1|AC013430_15 F3F9.20 [Arabidopsis thalia 30.0 7.4 gi|115468552|ref|NP_001057875.1| Os06g0562300 [Oryza sativa (... 29.6 9.7 gi|53791799|dbj|BAD53744.1| putative H1 gene protein [Oryza s... 29.6 9.7
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 428 Number of extensions: 14 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 637 Length of database: 101054579 Length adjustment: 108 Effective length of query: 529 Effective length of database: 70452887 Effective search space: 7327100248 Effective search space used: 7327100248 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 65 (29.6 bits)