RID=1168928010-30571-45293667683.BLASTQ1, Contig61

Alignments
 

>gi|33772151|gb|AAQ54512.1|  chlorophyll a/b-binding protein type I [Malus x domestica]
Length=147

 Score =  120 bits (301),  Expect = 1e-27
 Identities = 58/67 (86%), Positives = 62/67 (92%), Gaps = 1/67 (1%)
 Frame = -3

Query  200  PSVLSSSKSKFA-AAVQLPGVGANGSHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRL  24
            PSVLSSSKSKFA +AVQLP +GAN S R SMSA+WMPG+PRPPYLDGSAPGDFGFDPLRL
Sbjct  17   PSVLSSSKSKFATSAVQLPSIGANASSRFSMSAEWMPGEPRPPYLDGSAPGDFGFDPLRL  76

Query  23   GEVPENL  3
            GEVPENL
Sbjct  77   GEVPENL  83


>gi|110224748|emb|CAL07974.1|  chlorophyll a/b-binding protein, photosystem I [Platanus x acerifolia]
Length=167

 Score =  114 bits (284),  Expect = 1e-25
 Identities = 54/66 (81%), Positives = 57/66 (86%), Gaps = 0/66 (0%)
 Frame = -3

Query  200  PSVLSSSKSKFAAAVQLPGVGANGSHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLG  21
            PS+LSSSKSKFA AV LPG  +N S R +MSADWMPGQPRPPYLDGSAPGDFGFDPL LG
Sbjct  16   PSLLSSSKSKFATAVALPGACSNASTRFTMSADWMPGQPRPPYLDGSAPGDFGFDPLLLG  75

Query  20   EVPENL  3
             VPENL
Sbjct  76   AVPENL  81


>gi|493723|emb|CAA45523.1|  photosystem I light-harvesting chlorophyll a/b-binding protein 
[Nicotiana tabacum]
Length=245

 Score =  103 bits (256),  Expect = 2e-22
 Identities = 50/66 (75%), Positives = 54/66 (81%), Gaps = 0/66 (0%)
 Frame = -3

Query  200  PSVLSSSKSKFAAAVQLPGVGANGSHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLG  21
            PSVLSSS SKFA AV +     +G+ R SMSA+WMPGQPRPPYLDGSAPGDFGFDPL LG
Sbjct  16   PSVLSSSYSKFAVAVPVCVGAVSGNSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLG  75

Query  20   EVPENL  3
            EVP NL
Sbjct  76   EVPSNL  81


>gi|170388|gb|AAA34140.1|  chlorophyll a/b-binding protein
 gi|225895|prf||1402358A  photosystem I protein CAB
Length=246

 Score =  100 bits (250),  Expect = 1e-21
 Identities = 49/66 (74%), Positives = 52/66 (78%), Gaps = 0/66 (0%)
 Frame = -3

Query  200  PSVLSSSKSKFAAAVQLPGVGANGSHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLG  21
            PS LSS+KSKFAAA+ +     N   R SMSADWMPGQPRP YLDGSAPGDFGFDPL LG
Sbjct  16   PSFLSSTKSKFAAAMPVSVGATNSMSRFSMSADWMPGQPRPSYLDGSAPGDFGFDPLGLG  75

Query  20   EVPENL  3
            EVP NL
Sbjct  76   EVPANL  81


>gi|82079|pir||S06329  chlorophyll a/b-binding protein type I precursor (cab-6B) - tomato
Length=245

 Score =  100 bits (250),  Expect = 1e-21
 Identities = 49/66 (74%), Positives = 52/66 (78%), Gaps = 0/66 (0%)
 Frame = -3

Query  200  PSVLSSSKSKFAAAVQLPGVGANGSHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLG  21
            PS LSS+KSKFAAA+ +     N   R SMSADWMPGQPRP YLDGSAPGDFGFDPL LG
Sbjct  16   PSFLSSTKSKFAAAMPVSVGATNSMSRFSMSADWMPGQPRPSYLDGSAPGDFGFDPLGLG  75

Query  20   EVPENL  3
            EVP NL
Sbjct  76   EVPANL  81


>gi|115764|sp|P12360|CB11_LYCES  Chlorophyll a-b binding protein 6A, chloroplast precursor (LHCI 
type I CAB-6A) (Light-harvesting complex I 26 kDa protein)
 gi|170494|gb|AAA34186.1|  chlorophyll a/b binding protein precursor
Length=246

 Score = 95.9 bits (237),  Expect = 4e-20
 Identities = 48/66 (72%), Positives = 51/66 (77%), Gaps = 0/66 (0%)
 Frame = -3

Query  200  PSVLSSSKSKFAAAVQLPGVGANGSHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLG  21
            PS LSS+KSKFAAA+ +     N   R SMSADWMPGQPRP YLDGSAPGDFGFD L LG
Sbjct  16   PSFLSSTKSKFAAAMPVYVGATNFMSRFSMSADWMPGQPRPSYLDGSAPGDFGFDSLGLG  75

Query  20   EVPENL  3
            EVP NL
Sbjct  76   EVPANL  81


>gi|13265501|gb|AAG40043.2|AF324692_1  AT3g54890 [Arabidopsis thaliana]
Length=241

 Score = 94.4 bits (233),  Expect = 1e-19
 Identities = 48/67 (71%), Positives = 53/67 (79%), Gaps = 3/67 (4%)
 Frame = -3

Query  200  PSVLSSSKSKFAAA-VQLPGVGANGSHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRL  24
            PS+LSSSKSKF +A V LP  G  G  R+ M+A WMPG+PRP YLDGSAPGDFGFDPL L
Sbjct  16   PSLLSSSKSKFVSAGVPLPNAGNVG--RIKMAAHWMPGEPRPAYLDGSAPGDFGFDPLGL  73

Query  23   GEVPENL  3
            GEVP NL
Sbjct  74   GEVPANL  80


>gi|30694148|ref|NP_850706.1|  LHCA1 [Arabidopsis thaliana]
Length=164

 Score = 94.0 bits (232),  Expect = 1e-19
 Identities = 48/67 (71%), Positives = 53/67 (79%), Gaps = 3/67 (4%)
 Frame = -3

Query  200  PSVLSSSKSKFAAA-VQLPGVGANGSHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRL  24
            PS+LSSSKSKF +A V LP  G  G  R+ M+A WMPG+PRP YLDGSAPGDFGFDPL L
Sbjct  16   PSLLSSSKSKFVSAGVPLPNAGNVG--RIRMAAHWMPGEPRPAYLDGSAPGDFGFDPLGL  73

Query  23   GEVPENL  3
            GEVP NL
Sbjct  74   GEVPANL  80


>gi|30694146|ref|NP_850705.1|  LHCA1 [Arabidopsis thaliana]
Length=207

 Score = 94.0 bits (232),  Expect = 1e-19
 Identities = 48/67 (71%), Positives = 53/67 (79%), Gaps = 3/67 (4%)
 Frame = -3

Query  200  PSVLSSSKSKFAAA-VQLPGVGANGSHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRL  24
            PS+LSSSKSKF +A V LP  G  G  R+ M+A WMPG+PRP YLDGSAPGDFGFDPL L
Sbjct  16   PSLLSSSKSKFVSAGVPLPNAGNVG--RIRMAAHWMPGEPRPAYLDGSAPGDFGFDPLGL  73

Query  23   GEVPENL  3
            GEVP NL
Sbjct  74   GEVPANL  80


>gi|15233115|ref|NP_191049.1|  LHCA1; chlorophyll binding [Arabidopsis thaliana]
 gi|11762180|gb|AAG40368.1|AF325016_1  AT3g54890 [Arabidopsis thaliana]
 gi|11908038|gb|AAG41448.1|AF326866_1  putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
 gi|12642856|gb|AAK00370.1|AF339688_1  putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
 gi|13605732|gb|AAK32859.1|AF361847_1  AT3g54890/F28P10_130 [Arabidopsis thaliana]
 gi|16207|emb|CAA39534.1|  chlorophyll A/B-binding protein [Arabidopsis thaliana]
 gi|166644|gb|AAA32759.1|  chlorophyll a/b-binding protein
 gi|4678304|emb|CAB41095.1|  chlorophyll a/b-binding protein [Arabidopsis thaliana]
 gi|17979245|gb|AAL49939.1|  AT3g54890/F28P10_130 [Arabidopsis thaliana]
 gi|20453135|gb|AAM19809.1|  AT3g54890/F28P10_130 [Arabidopsis thaliana]
 gi|23507771|gb|AAN38689.1|  At3g54890/F28P10_130 [Arabidopsis thaliana]
Length=241

 Score = 94.0 bits (232),  Expect = 1e-19
 Identities = 48/67 (71%), Positives = 53/67 (79%), Gaps = 3/67 (4%)
 Frame = -3

Query  200  PSVLSSSKSKFAAA-VQLPGVGANGSHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRL  24
            PS+LSSSKSKF +A V LP  G  G  R+ M+A WMPG+PRP YLDGSAPGDFGFDPL L
Sbjct  16   PSLLSSSKSKFVSAGVPLPNAGNVG--RIRMAAHWMPGEPRPAYLDGSAPGDFGFDPLGL  73

Query  23   GEVPENL  3
            GEVP NL
Sbjct  74   GEVPANL  80


>gi|20788|emb|CAA41404.1|  Type 1 chlorophyll a /b-binding protein [Pinus sylvestris]
Length=246

 Score = 89.0 bits (219),  Expect = 5e-18
 Identities = 43/62 (69%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
 Frame = -3

Query  188  SSSKSKFAAAVQLPGVGANGSHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE  9
            SS+KS+F +      VG     RVSMSA+WMPGQPRPP+LDGSAPGDFGFDPLRLG +PE
Sbjct  21   SSAKSRFFSPTSSL-VGRRHGSRVSMSAEWMPGQPRPPHLDGSAPGDFGFDPLRLGVIPE  79

Query  8    NL  3
            NL
Sbjct  80   NL  81


>gi|20790|emb|CAA41405.1|  Type 1 chlorophyll a /b-binding protein [Pinus sylvestris]
Length=207

 Score = 84.0 bits (206),  Expect = 1e-16
 Identities = 36/40 (90%), Positives = 39/40 (97%), Gaps = 0/40 (0%)
 Frame = -3

Query  122  RVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            RVSMSA+WMPGQPRPP+LDGSAPGDFGFDPLRLG +PENL
Sbjct  3    RVSMSAEWMPGQPRPPHLDGSAPGDFGFDPLRLGVIPENL  42


>gi|115467828|ref|NP_001057513.1|  Os06g0320500 [Oryza sativa (japonica cultivar-group)]
 gi|3789954|gb|AAC67558.1|  chlorophyll a/b-binding protein precursor [Oryza sativa]
 gi|54290899|dbj|BAD61582.1|  chlorophyll a/b-binding protein precursor [Oryza sativa (japonica 
cultivar-group)]
 gi|113595553|dbj|BAF19427.1|  Os06g0320500 [Oryza sativa (japonica cultivar-group)]
Length=241

 Score = 75.1 bits (183),  Expect = 7e-14
 Identities = 38/65 (58%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
 Frame = -3

Query  200  PSVLSSSKSKFAAAVQLPGVGANGSHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLG  21
            PS+L+ S ++    V      A  S RV+MSA+WMPGQPRP +LDGS+PGDFGFDPL L 
Sbjct  15   PSLLAPSSNRSRLPVC---AYATTSGRVTMSAEWMPGQPRPAHLDGSSPGDFGFDPLGLA  71

Query  20   EVPEN  6
             VPEN
Sbjct  72   TVPEN  76


>gi|6685157|gb|AAF23819.1|AF218305_2  chlorophyll a/b binding protein precursor [Hordeum vulgare]
Length=245

 Score = 72.4 bits (176),  Expect = 4e-13
 Identities = 32/44 (72%), Positives = 36/44 (81%), Gaps = 0/44 (0%)
 Frame = -3

Query  137  ANGSHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPEN  6
            A  S RV+MSA+W PGQPRP +LDGS+PGDFGFDPL L  VPEN
Sbjct  36   ATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFGFDPLGLATVPEN  79


>gi|21593722|gb|AAM65689.1|  light-harvesting complex protein [Arabidopsis thaliana]
Length=256

 Score = 57.4 bits (137),  Expect = 1e-08
 Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
 Frame = -3

Query  188  SSSKSKFAAAVQLPGVGANGSHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE  9
            SS  ++  ++V+  G G N +  V   A W+PG   PPYLDG+  GD+GFDPL LGE PE
Sbjct  21   SSVITRRISSVKAAGGGINPTVAVER-ATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPE  79

Query  8    NL  3
            +L
Sbjct  80   SL  81


>gi|4741942|gb|AAD28768.1|AF134121_1  Lhca5 protein [Arabidopsis thaliana]
Length=256

 Score = 57.4 bits (137),  Expect = 1e-08
 Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
 Frame = -3

Query  188  SSSKSKFAAAVQLPGVGANGSHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE  9
            SS  ++  ++V+  G G N +  V   A W+PG   PPYLDG+  GD+GFDPL LGE PE
Sbjct  21   SSVITRRISSVKAAGGGINPTVAVER-ATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPE  79

Query  8    NL  3
            +L
Sbjct  80   SL  81


>gi|115448873|ref|NP_001048216.1|  Os02g0764500 [Oryza sativa (japonica cultivar-group)]
 gi|46805727|dbj|BAD17114.1|  putative light-harvesting chlorophyll-a/b protein of photosystem 
I [Oryza sativa (japonica cultivar-group)]
 gi|113537747|dbj|BAF10130.1|  Os02g0764500 [Oryza sativa (japonica cultivar-group)]
Length=261

 Score = 57.4 bits (137),  Expect = 1e-08
 Identities = 24/35 (68%), Positives = 27/35 (77%), Gaps = 0/35 (0%)
 Frame = -3

Query  107  ADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            A W+PG   PP+LDG+ PGDFGFDPL LGE P NL
Sbjct  55   ATWLPGLDPPPHLDGTLPGDFGFDPLGLGEEPANL  89


>gi|15220077|ref|NP_175137.1|  LHCA5 [Arabidopsis thaliana]
 gi|30693978|ref|NP_849778.1|  LHCA5 [Arabidopsis thaliana]
 gi|12321000|gb|AAG50618.1|AC083835_3  light-harvesting complex protein [Arabidopsis thaliana]
 gi|17063199|gb|AAL32974.1|  At1g45474/F2G19.4 [Arabidopsis thaliana]
 gi|19699116|gb|AAL90924.1|  At1g45474/F2G19.4 [Arabidopsis thaliana]
 gi|62320735|dbj|BAD95402.1|  light-harvesting complex protein [Arabidopsis thaliana]
Length=256

 Score = 57.4 bits (137),  Expect = 1e-08
 Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
 Frame = -3

Query  188  SSSKSKFAAAVQLPGVGANGSHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE  9
            SS  ++  ++V+  G G N +  V   A W+PG   PPYLDG+  GD+GFDPL LGE PE
Sbjct  21   SSVITRRISSVKAAGGGINPTVAVER-ATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPE  79

Query  8    NL  3
            +L
Sbjct  80   SL  81


>gi|33438474|emb|CAE30280.1|  chlorophyll a /b binding protein [Beta vulgaris]
Length=252

 Score = 56.6 bits (135),  Expect = 3e-08
 Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
 Frame = -3

Query  158  VQLPGVGANGSHRV-SMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            V+LP   +  S +V +   +W+PG   P YL+GS PGD GFDPL L E PENL
Sbjct  36   VRLPSTSSTNSLKVEAKKGEWLPGLASPAYLNGSLPGDNGFDPLALAEDPENL  88


>gi|3789952|gb|AAC67557.1|  chlorophyll a/b-binding protein presursor [Oryza sativa]
Length=244

 Score = 56.2 bits (134),  Expect = 3e-08
 Identities = 24/40 (60%), Positives = 27/40 (67%), Gaps = 0/40 (0%)
 Frame = -3

Query  122  RVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            R     +W+PG P P YL+GS PGD GFDPL L E PENL
Sbjct  42   RAEAKGEWLPGLPSPTYLNGSLPGDNGFDPLGLAEDPENL  81


>gi|72580631|gb|AAR19267.2|  chlorophyll a/b binding protein presusor [Oryza sativa (japonica 
cultivar-group)]
Length=244

 Score = 56.2 bits (134),  Expect = 3e-08
 Identities = 24/40 (60%), Positives = 27/40 (67%), Gaps = 0/40 (0%)
 Frame = -3

Query  122  RVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            R     +W+PG P P YL+GS PGD GFDPL L E PENL
Sbjct  42   RAEAKGEWLPGLPSPTYLNGSLPGDNGFDPLGLAEDPENL  81


>gi|115476576|ref|NP_001061884.1|  Os08g0435900 [Oryza sativa (japonica cultivar-group)]
 gi|42407519|dbj|BAD10636.1|  putative chlorophyll a/b-binding protein precursor [Oryza sativa 
(japonica cultivar-group)]
 gi|113623853|dbj|BAF23798.1|  Os08g0435900 [Oryza sativa (japonica cultivar-group)]
Length=244

 Score = 56.2 bits (134),  Expect = 3e-08
 Identities = 24/40 (60%), Positives = 27/40 (67%), Gaps = 0/40 (0%)
 Frame = -3

Query  122  RVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            R     +W+PG P P YL+GS PGD GFDPL L E PENL
Sbjct  42   RAEAKGEWLPGLPSPTYLNGSLPGDNGFDPLGLAEDPENL  81


>gi|2306981|gb|AAB65793.1|  photosystem I antenna protein [Oryza sativa]
Length=265

 Score = 55.8 bits (133),  Expect = 4e-08
 Identities = 38/91 (41%), Positives = 42/91 (46%), Gaps = 28/91 (30%)
 Frame = -3

Query  191  LSSSKSKFAAAVQLPGV--------GANGSHRV------SMSAD--------------WM  96
            L S+ S F A   LPG         GA  S R+      S SA               W 
Sbjct  4    LVSNSSSFTAVAALPGAPRASSFLGGAGRSGRLLLRQAESSSARASFAVRAAAPDRPIWF  63

Query  95   PGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            PG   PP+LDGS PGDFGFDPL LG  PE+L
Sbjct  64   PGSTPPPWLDGSLPGDFGFDPLGLGSDPESL  94


>gi|15233120|ref|NP_191706.1|  LHCA2; chlorophyll binding [Arabidopsis thaliana]
 gi|6850838|emb|CAB71077.1|  Lhca2 protein [Arabidopsis thaliana]
Length=257

 Score = 55.5 bits (132),  Expect = 6e-08
 Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
 Frame = -3

Query  200  PSVLSSSKSKFAAAVQLPGVGANGSHRVSMSAD-----WMPGQPRPPYLDGSAPGDFGFD  36
            PS L   K +    + +P V    +   +++AD     W PG   P +LDGS PGDFGFD
Sbjct  17   PSFLGGKKLRLKKKLTVPAVSRQDASVRAVAADPDRPIWFPGSTPPEWLDGSLPGDFGFD  76

Query  35   PLRLGEVPENL  3
            PL L   P++L
Sbjct  77   PLGLSSDPDSL  87


>gi|115472983|ref|NP_001060090.1|  Os07g0577600 [Oryza sativa (japonica cultivar-group)]
 gi|34393511|dbj|BAC83072.1|  putative photosystem I antenna protein [Oryza sativa (japonica 
cultivar-group)]
 gi|113611626|dbj|BAF22004.1|  Os07g0577600 [Oryza sativa (japonica cultivar-group)]
Length=263

 Score = 55.5 bits (132),  Expect = 6e-08
 Identities = 23/33 (69%), Positives = 25/33 (75%), Gaps = 0/33 (0%)
 Frame = -3

Query  101  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            W PG   PP+LDGS PGDFGFDPL LG  PE+L
Sbjct  61   WFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESL  93


>gi|602359|emb|CAA57492.1|  Type II chlorophyll a/b binding protein from photosystem I [Pisum 
sativum]
Length=269

 Score = 55.5 bits (132),  Expect = 6e-08
 Identities = 23/33 (69%), Positives = 25/33 (75%), Gaps = 0/33 (0%)
 Frame = -3

Query  101  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            W PG   PP+LDGS PGDFGFDPL LG  PE+L
Sbjct  67   WFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESL  99


>gi|18539429|gb|AAL74385.1|AF359117_1  LHC I type II chlorophyll binding protein [Pinus sylvestris]
 gi|18539431|gb|AAL74386.1|AF359118_1  LHC I type II chlorophyll binding protein [Pinus sylvestris]
Length=137

 Score = 55.1 bits (131),  Expect = 7e-08
 Identities = 23/33 (69%), Positives = 24/33 (72%), Gaps = 0/33 (0%)
 Frame = -3

Query  101  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            W PG   PP+LDGS PGDFGFDPL LG  PE L
Sbjct  23   WFPGNTPPPWLDGSLPGDFGFDPLGLGSDPETL  55


>gi|20792|emb|CAA41406.1|  Type II chlorophyll a /b-binding protein [Pinus sylvestris]
Length=278

 Score = 55.1 bits (131),  Expect = 7e-08
 Identities = 23/33 (69%), Positives = 24/33 (72%), Gaps = 0/33 (0%)
 Frame = -3

Query  101  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            W PG   PP+LDGS PGDFGFDPL LG  PE L
Sbjct  76   WFPGNTPPPWLDGSLPGDFGFDPLGLGSDPETL  108


>gi|4741940|gb|AAD28767.1|AF134120_1  Lhca2 protein [Arabidopsis thaliana]
 gi|15451180|gb|AAK96861.1|  Lhca2 protein [Arabidopsis thaliana]
 gi|17529286|gb|AAL38870.1|  putative Lhca2 protein [Arabidopsis thaliana]
 gi|18377464|gb|AAL66898.1|  Lhca2 protein [Arabidopsis thaliana]
 gi|25083456|gb|AAN72081.1|  Lhca2 protein [Arabidopsis thaliana]
Length=257

 Score = 54.7 bits (130),  Expect = 1e-07
 Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
 Frame = -3

Query  200  PSVLSSSKSKFAAAVQLPGVGANGSHRVSMSAD-----WMPGQPRPPYLDGSAPGDFGFD  36
            PS L   K +    + +P V    +   +++AD     W PG   P +LDGS PGDFGFD
Sbjct  17   PSFLGGKKLRLKKKLTVPAVSRPDASVRAVAADPDRPIWFPGSTPPEWLDGSLPGDFGFD  76

Query  35   PLRLGEVPENL  3
            PL L   P++L
Sbjct  77   PLGLSSDPDSL  87


>gi|115766|sp|P13869|CB12_PETHY  Chlorophyll a-b binding protein, chloroplast precursor (LHCI 
type II CAB)
 gi|169214|gb|AAA33711.1|  chlorophyll binding protein precursor
 gi|226259|prf||1503272A  chlorophyll binding protein
Length=270

 Score = 54.7 bits (130),  Expect = 1e-07
 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 11/76 (14%)
 Frame = -3

Query  197  SVLSSSKSKFAAAVQL---PGVGANGSHRVSMSAD--------WMPGQPRPPYLDGSAPG  51
            S++ ++K+ F    +L     +   GS  V++SA         W PG   P +LDGS PG
Sbjct  25   SIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPG  84

Query  50   DFGFDPLRLGEVPENL  3
            DFGFDPL LG  PE+L
Sbjct  85   DFGFDPLGLGSDPESL  100


>gi|6470348|gb|AAF13731.1|  PSI light-harvesting antenna chlorophyll a/b-binding protein 
[Pisum sativum]
Length=252

 Score = 53.9 bits (128),  Expect = 2e-07
 Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = -3

Query  188  SSSKSKFAAAVQLPGVGANGSHRV-SMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVP  12
            SS K     A +  G   + S +V +   +W+PG   P YL GS PGD GFDPL L E P
Sbjct  26   SSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDP  85

Query  11   ENL  3
            ENL
Sbjct  86   ENL  88


>gi|115479363|ref|NP_001063275.1|  Os09g0439500 [Oryza sativa (japonica cultivar-group)]
 gi|51091350|dbj|BAD36085.1|  putative chlorophyll a/b-binding protein type II [Oryza sativa 
(japonica cultivar-group)]
 gi|51091400|dbj|BAD36143.1|  putative chlorophyll a/b-binding protein type II [Oryza sativa 
(japonica cultivar-group)]
 gi|113631508|dbj|BAF25189.1|  Os09g0439500 [Oryza sativa (japonica cultivar-group)]
Length=264

 Score = 53.9 bits (128),  Expect = 2e-07
 Identities = 23/33 (69%), Positives = 24/33 (72%), Gaps = 0/33 (0%)
 Frame = -3

Query  101  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            W PG   PP+LDGS PGDFGFDPL LG  PE L
Sbjct  62   WFPGSSPPPWLDGSLPGDFGFDPLGLGSDPELL  94


>gi|115765|sp|P10708|CB12_LYCES  Chlorophyll a-b binding protein 7, chloroplast precursor (LHCI 
type II CAB-7)
 gi|19180|emb|CAA32197.1|  chlorophyll a/b-binding protein [Solanum lycopersicum]
 gi|170431|gb|AAA34159.1|  chlorophyll a/b-binding protein
 gi|226546|prf||1601518A  chlorophyll a/b binding protein II
Length=270

 Score = 53.5 bits (127),  Expect = 2e-07
 Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
 Frame = -3

Query  137  ANGSHRVSMSAD-----WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            A  +  V ++AD     W PG   PP+LDGS PGDFGFDPL L   PE+L
Sbjct  51   ARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESL  100


>gi|551047|emb|CAA55864.1|  type II LHCI [Lolium temulentum]
Length=253

 Score = 53.1 bits (126),  Expect = 3e-07
 Identities = 22/33 (66%), Positives = 24/33 (72%), Gaps = 0/33 (0%)
 Frame = -3

Query  101  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            W PG   PP+LDGS PGDFGFDP  LG  PE+L
Sbjct  51   WFPGSTPPPWLDGSLPGDFGFDPWGLGSDPESL  83


>gi|666054|emb|CAA59049.1|  LHCI-680, photosystem I antenna protein [Hordeum vulgare subsp. 
vulgare]
Length=255

 Score = 53.1 bits (126),  Expect = 3e-07
 Identities = 22/33 (66%), Positives = 24/33 (72%), Gaps = 0/33 (0%)
 Frame = -3

Query  101  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            W PG   PP+LDGS PGDFGFDP  LG  PE+L
Sbjct  53   WFPGSTPPPWLDGSLPGDFGFDPWGLGSDPESL  85


>gi|100801744|emb|CAK24966.1|  chlorophyll a/b binding protein [Solanum tuberosum]
Length=251

 Score = 52.8 bits (125),  Expect = 4e-07
 Identities = 23/33 (69%), Positives = 24/33 (72%), Gaps = 0/33 (0%)
 Frame = -3

Query  101  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            W+PG   P YLDGS PGD GFDPL L E PENL
Sbjct  56   WLPGLASPDYLDGSLPGDNGFDPLGLAEDPENL  88


>gi|22753|emb|CAA78932.1|  Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem 
I [Pinus sylvestris]
Length=251

 Score = 52.8 bits (125),  Expect = 4e-07
 Identities = 23/42 (54%), Positives = 28/42 (66%), Gaps = 0/42 (0%)
 Frame = -3

Query  128  SHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            S +V    +W+PG   P YL+GS PGD GFDPL L E PE+L
Sbjct  46   SFKVEAKGEWLPGLSSPSYLNGSLPGDNGFDPLGLAEDPESL  87


>gi|829287|emb|CAA78901.1|  Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem 
I [Pinus sylvestris]
Length=244

 Score = 52.8 bits (125),  Expect = 4e-07
 Identities = 23/42 (54%), Positives = 28/42 (66%), Gaps = 0/42 (0%)
 Frame = -3

Query  128  SHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            S +V    +W+PG   P YL+GS PGD GFDPL L E PE+L
Sbjct  39   SFKVEAKGEWLPGLSSPSYLNGSLPGDNGFDPLGLAEDPESL  80


>gi|544700|gb|AAB29485.1|  light-harvesting complex I; LHC I [Hordeum vulgare]
Length=221

 Score = 52.4 bits (124),  Expect = 5e-07
 Identities = 25/44 (56%), Positives = 29/44 (65%), Gaps = 0/44 (0%)
 Frame = -3

Query  137  ANGSHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPEN  6
            A  S RV+MSA+W PGQPRP +L GS+P      PL L  VPEN
Sbjct  12   ATTSGRVTMSAEWFPGQPRPAHLAGSSPRGLRVRPLGLATVPEN  55


>gi|40714509|dbj|BAD06918.1|  light-harvesting chlorophyll-a/b protein of photosystem I [Chlamydomonas 
reinhardtii]
Length=264

 Score = 52.4 bits (124),  Expect = 5e-07
 Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 0/45 (0%)
 Frame = -3

Query  137  ANGSHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            + G+ R +    WMPG   P YL+G+ PGDFGFDPL LG+ P  L
Sbjct  49   SGGAKRDAALPSWMPGADLPGYLNGTLPGDFGFDPLYLGQDPVKL  93


>gi|18376587|emb|CAC81065.1|  putative chlorophyll A-B binding protein of LHCI type II precursor 
[Picea abies]
Length=278

 Score = 52.4 bits (124),  Expect = 5e-07
 Identities = 22/33 (66%), Positives = 23/33 (69%), Gaps = 0/33 (0%)
 Frame = -3

Query  101  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            W PG   PP+LDGS P DFGFDPL LG  PE L
Sbjct  76   WFPGTTPPPWLDGSLPADFGFDPLGLGSDPETL  108


>gi|544702|gb|AAB29486.1|  light-harvesting complex I; LHC I [Hordeum vulgare]
Length=231

 Score = 51.2 bits (121),  Expect = 1e-06
 Identities = 27/56 (48%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
 Frame = -3

Query  149  PGVGANGSHR-------VSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            P   A+GS R       V     W+PG   P YLDGS  GD GFDPL L E PE+L
Sbjct  13   PSPAASGSPRSTRRDVAVQAKGSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDL  68


>gi|27754356|gb|AAO22627.1|  putative light-harvesting chlorophyll a/b binding protein [Arabidopsis 
thaliana]
Length=270

 Score = 50.8 bits (120),  Expect = 1e-06
 Identities = 21/33 (63%), Positives = 23/33 (69%), Gaps = 0/33 (0%)
 Frame = -3

Query  101  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            W PG   P +LDGS PGDFGFDPL LG  P+ L
Sbjct  68   WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTL  100


>gi|8954053|gb|AAF82226.1|AC069143_2  Contains similarity to a chlorophyll a/b-binding protein type 
II from Arabidopsis thaliana gi|S46295 and contains a chlorophyll 
A-B binding proteins PF|00504 domain
Length=267

 Score = 50.8 bits (120),  Expect = 1e-06
 Identities = 21/33 (63%), Positives = 23/33 (69%), Gaps = 0/33 (0%)
 Frame = -3

Query  101  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            W PG   P +LDGS PGDFGFDPL LG  P+ L
Sbjct  68   WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTL  100


>gi|15221956|ref|NP_173349.1|  LHCA2*1; chlorophyll binding [Arabidopsis thaliana]
 gi|21554357|gb|AAM63464.1|  PSI type II chlorophyll a/b-binding protein, putative [Arabidopsis 
thaliana]
 gi|56381917|gb|AAV85677.1|  At1g19150 [Arabidopsis thaliana]
 gi|58331805|gb|AAW70400.1|  At1g19150 [Arabidopsis thaliana]
Length=270

 Score = 50.8 bits (120),  Expect = 1e-06
 Identities = 21/33 (63%), Positives = 23/33 (69%), Gaps = 0/33 (0%)
 Frame = -3

Query  101  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            W PG   P +LDGS PGDFGFDPL LG  P+ L
Sbjct  68   WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTL  100


>gi|575349|emb|CAA57877.1|  light-harvesting chlorophyll a /b binding protein [Nicotiana 
tabacum]
Length=200

 Score = 50.4 bits (119),  Expect = 2e-06
 Identities = 22/33 (66%), Positives = 23/33 (69%), Gaps = 0/33 (0%)
 Frame = -3

Query  101  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            W+PG   P YLDGS PGD GF PL L E PENL
Sbjct  5    WLPGLASPTYLDGSLPGDXGFAPLGLAEDPENL  37


>gi|27542569|gb|AAO16495.1|  light-harvesting complex I protein [Chlamydomonas reinhardtii]
Length=241

 Score = 50.4 bits (119),  Expect = 2e-06
 Identities = 20/33 (60%), Positives = 24/33 (72%), Gaps = 0/33 (0%)
 Frame = -3

Query  101  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            W PG P P +LDGS  GD+GFDPL LG+ P+ L
Sbjct  33   WFPGNPPPAHLDGSLAGDYGFDPLFLGQEPQTL  65


>gi|40714521|dbj|BAD06924.1|  light-harvesting chlorophyll-a/b protein of photosystem I [Chlamydomonas 
reinhardtii]
Length=241

 Score = 50.4 bits (119),  Expect = 2e-06
 Identities = 20/33 (60%), Positives = 24/33 (72%), Gaps = 0/33 (0%)
 Frame = -3

Query  101  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            W PG P P +LDGS  GD+GFDPL LG+ P+ L
Sbjct  33   WFPGNPPPAHLDGSLAGDYGFDPLFLGQEPQTL  65


>gi|20218813|emb|CAC84491.1|  putative chlorophyll a/b-binding protein type 4 [Pinus pinaster]
Length=251

 Score = 50.1 bits (118),  Expect = 2e-06
 Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 0/42 (0%)
 Frame = -3

Query  128  SHRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENL  3
            S +V    +W+PG   P YL+GS PGD G DPL L E PE+L
Sbjct  46   SFKVEAKGEWLPGLSSPSYLNGSLPGDNGXDPLGLAEDPESL  87


>gi|9624495|gb|AAF90200.1|AF287276_2  chlorophyll a/b-binding protein precursor [Hordeum vulgare]
Length=228

 Score = 49.7 bits (117),  Expect = 3e-06
 Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = -3

Query  188  SSSKSKFAAAVQLPGVGANGSHRVSMSA--DWMPGQPRPPYLDGSAPGDFGFDPLRLGEV  15
            S+S  +F       G+  +    V++ A   W+PG   P YLDGS  GD GFDPL L E 
Sbjct  1    SASSPRFLGDSGRVGLAKSTRRDVAVQAKGSWLPGLQSPAYLDGSLAGDNGFDPLALAED  60

Query  14   PENL  3
            PE+L
Sbjct  61   PEDL  64
Distribution of 100 Blast Hits on the Query Sequence
