RID=1168928029-14593-194467614971.BLASTQ1, Contig62

Alignments
 

>gi|18402995|ref|NP_564563.1|  FTSH1; ATP-dependent peptidase/ ATPase/ metallopeptidase [Arabidopsis 
thaliana]
 gi|17865766|sp|Q39102|FTSH1_ARATH  Cell division protease ftsH homolog 1, chloroplast precursor
 gi|5734790|gb|AAD50055.1|AC007980_20  ATP-dependent metalloprotease [Arabidopsis thaliana]
 gi|20268684|gb|AAM14046.1|  putative chloroplast FtsH protease [Arabidopsis thaliana]
 gi|21689847|gb|AAM67567.1|  putative chloroplast FtsH protease [Arabidopsis thaliana]
Length=716

 Score =  388 bits (996),  Expect = 1e-107
 Identities = 197/225 (87%), Positives = 211/225 (93%), Gaps = 1/225 (0%)
 Frame = -3

Query  678  DGXSDALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  499
            D  SDALERI+AGP +   + S+ ++R  VAYHEAGHALVGALMPEYDPVAKISIIPRGQ
Sbjct  493  DEISDALERIIAGPEKKNAVVSEEKKR-LVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  551

Query  498  AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSR  319
            AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSR
Sbjct  552  AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSR  611

Query  318  VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYT  139
            VARQM+ERFGFSKKIGQVA+GGPGGNPF+GQQMSSQKDYSMATAD+VD+EVRELVE AY 
Sbjct  612  VARQMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYSMATADIVDAEVRELVEKAYK  671

Query  138  RAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKTELYVS  4
            RA +IITTHIDILHKLAQLLIEKETVDGEEFMSLFIDG+ ELY+S
Sbjct  672  RATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYIS  716


>gi|115470052|ref|NP_001058625.1|  Os06g0725900 [Oryza sativa (japonica cultivar-group)]
 gi|75321991|sp|Q5Z974|FTSH_ORYSA  Cell division protease ftsH homolog, chloroplast precursor
 gi|54291028|dbj|BAD61706.1|  putative chloroplast FtsH protease [Oryza sativa (japonica cultivar-group)]
 gi|113596665|dbj|BAF20539.1|  Os06g0725900 [Oryza sativa (japonica cultivar-group)]
Length=686

 Score =  387 bits (994),  Expect = 2e-107
 Identities = 200/225 (88%), Positives = 211/225 (93%), Gaps = 1/225 (0%)
 Frame = -3

Query  678  DGXSDALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  499
            D  SDALERI+AGP +   + S+ +RR  VAYHEAGHALVGALMPEYDPVAKISIIPRGQ
Sbjct  463  DEISDALERIIAGPEKKNAVVSEEKRR-LVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  521

Query  498  AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSR  319
            AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG ENVTTGASNDFMQVSR
Sbjct  522  AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQENVTTGASNDFMQVSR  581

Query  318  VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYT  139
            VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVD+EVRELVE AY+
Sbjct  582  VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVEKAYS  641

Query  138  RAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKTELYVS  4
            RA QIITTHIDILHKLAQLL+EKETVDGEEFMSLFIDG+ EL+V+
Sbjct  642  RATQIITTHIDILHKLAQLLMEKETVDGEEFMSLFIDGQAELFVA  686


>gi|18422193|ref|NP_568604.1|  VAR1 (VARIEGATED 1); ATP-dependent peptidase/ ATPase/ metallopeptidase 
[Arabidopsis thaliana]
 gi|17865467|sp|Q9FH02|FTSH2_ARATH  Cell division protease ftsH homolog 2, chloroplast precursor
 gi|10177012|dbj|BAB10200.1|  cell division protein FtsH [Arabidopsis thaliana]
 gi|22022513|gb|AAM83215.1|  AT5g42270/K5J14_7 [Arabidopsis thaliana]
Length=704

 Score =  384 bits (987),  Expect = 1e-106
 Identities = 199/225 (88%), Positives = 209/225 (92%), Gaps = 1/225 (0%)
 Frame = -3

Query  678  DGXSDALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  499
            D  SDALERI+AGP +   + S+ ++R  VAYHEAGHALVGALMPEYDPVAKISIIPRGQ
Sbjct  481  DEISDALERIIAGPEKKNAVVSEEKKR-LVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  539

Query  498  AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSR  319
            AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSR
Sbjct  540  AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSR  599

Query  318  VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYT  139
            VARQMVERFGFSKKIGQVA+GG GGNPFLGQ MSSQKDYSMATADVVD+EVRELVE AY 
Sbjct  600  VARQMVERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKDYSMATADVVDAEVRELVEKAYV  659

Query  138  RAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKTELYVS  4
            RAK+IITT IDILHKLAQLLIEKETVDGEEFMSLFIDG+ ELYVS
Sbjct  660  RAKEIITTQIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYVS  704


>gi|37538489|gb|AAQ93011.1|  FtsH-like protein precursor [Lycopersicon esculentum]
Length=708

 Score =  380 bits (976),  Expect = 3e-105
 Identities = 197/225 (87%), Positives = 207/225 (92%), Gaps = 1/225 (0%)
 Frame = -3

Query  678  DGXSDALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  499
            D  SDALERI+AGP +   + S  +++  VAYHEAGHALVGALMPEYDPVAKISIIPRGQ
Sbjct  485  DEISDALERIIAGPEKKNAVVSDEKKK-LVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  543

Query  498  AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSR  319
            AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG +NVTTGASNDFMQVSR
Sbjct  544  AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQDNVTTGASNDFMQVSR  603

Query  318  VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYT  139
            VARQMVER GFSKKIGQVAIGG GGNPFLGQQMS+QKDYSMATADVVD+EVRELVE AY 
Sbjct  604  VARQMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYSMATADVVDAEVRELVEKAYE  663

Query  138  RAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKTELYVS  4
            RA QIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGK ELY+S
Sbjct  664  RATQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELYIS  708


>gi|1483215|emb|CAA68141.1|  chloroplast FtsH protease [Arabidopsis thaliana]
Length=709

 Score =  379 bits (972),  Expect = 7e-105
 Identities = 193/218 (88%), Positives = 205/218 (94%), Gaps = 1/218 (0%)
 Frame = -3

Query  678  DGXSDALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  499
            D  SDALERI+AGP +   + S+ ++R  VAYHEAGHALVGALMPEYDPVAKISIIPRGQ
Sbjct  493  DEISDALERIIAGPEKKNAVVSEEKKR-LVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  551

Query  498  AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSR  319
            AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSR
Sbjct  552  AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSR  611

Query  318  VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYT  139
            VARQM+ERFGFSKKIGQVA+GGPGGNPF+GQQMSSQKDYSMATAD+VD+EVRELVE AY 
Sbjct  612  VARQMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYSMATADIVDAEVRELVEKAYK  671

Query  138  RAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDG  25
            RA +IITTHIDILHKLAQLLIEKETVDGEEFMSLFIDG
Sbjct  672  RATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDG  709


>gi|17865457|sp|O82150|FTSH_TOBAC  Cell division protease ftsH homolog, chloroplast precursor (DS9)
 gi|5804782|dbj|BAA33755.2|  chloroplast FtsH protease [Nicotiana tabacum]
Length=714

 Score =  376 bits (965),  Expect = 5e-104
 Identities = 195/225 (86%), Positives = 206/225 (91%), Gaps = 1/225 (0%)
 Frame = -3

Query  678  DGXSDALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  499
            D  SDALERI+AGP +   + S  +++  VAYHEAGHALVGALMPEYDPVAKISIIPRGQ
Sbjct  484  DEISDALERIIAGPEKKNAVVSDEKKK-LVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  542

Query  498  AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSR  319
            AGGLTFFAPSEERLESGLYSRSYLENQMAVALG RVAEEVIFG +NVTTGASNDFMQVSR
Sbjct  543  AGGLTFFAPSEERLESGLYSRSYLENQMAVALGERVAEEVIFGQDNVTTGASNDFMQVSR  602

Query  318  VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYT  139
            VARQMVER GFSKKIGQVAIGG GGNPFLGQQMS+QKDYSMATADVVD+EVRELVE AY 
Sbjct  603  VARQMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYSMATADVVDAEVRELVERAYE  662

Query  138  RAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKTELYVS  4
            RA +IITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGK ELY+S
Sbjct  663  RATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELYIS  707


>gi|17865463|sp|Q9BAE0|FTSH_MEDSA  Cell division protease ftsH homolog, chloroplast precursor
 gi|13183728|gb|AAK15322.1|AF332134_1  FtsH protease [Medicago sativa]
Length=706

 Score =  374 bits (959),  Expect = 2e-103
 Identities = 195/225 (86%), Positives = 206/225 (91%), Gaps = 2/225 (0%)
 Frame = -3

Query  678  DGXSDALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  499
            D  +DALERI+AGP +   + S+ +++  VAYHEAGHALVGALMPEYDPVAKISIIPRGQ
Sbjct  484  DEIADALERIIAGPEKKNAVVSEEKKK-LVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  542

Query  498  AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSR  319
            AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV FG +NVTTGASNDFMQVSR
Sbjct  543  AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV-FGQDNVTTGASNDFMQVSR  601

Query  318  VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYT  139
            VARQMVERFGFSKKIGQVAIGG GGNPFLGQQMSSQKDYSMATAD+VD EVRELV+ AY 
Sbjct  602  VARQMVERFGFSKKIGQVAIGGGGGNPFLGQQMSSQKDYSMATADIVDKEVRELVDKAYE  661

Query  138  RAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKTELYVS  4
            RA QII THIDILHKLAQLLIEKETVDGEEFMSLFIDGK ELYVS
Sbjct  662  RATQIINTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELYVS  706


>gi|2077957|emb|CAA73318.1|  ATPase [Arabidopsis thaliana]
Length=634

 Score =  345 bits (884),  Expect = 1e-94
 Identities = 176/210 (83%), Positives = 191/210 (90%), Gaps = 1/210 (0%)
 Frame = -3

Query  678  DGXSDALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  499
            D  SDALERI+AGP +   + S+ ++R  VAYHEAGHAL G   PEY+PVAKISIIPRGQ
Sbjct  425  DEISDALERIIAGPEKKNAVVSEEKKR-LVAYHEAGHALGGCSYPEYNPVAKISIIPRGQ  483

Query  498  AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSR  319
            AGGLTFFAPSEERLESGLYSRSYLENQMA +LGGRVAEEVIFGDENVTTGASNDFMQVSR
Sbjct  484  AGGLTFFAPSEERLESGLYSRSYLENQMACSLGGRVAEEVIFGDENVTTGASNDFMQVSR  543

Query  318  VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYT  139
            VARQM+ERFGFSKKIGQVA+GGPGGNPF+GQQMSSQKDYSMATAD+VD+EVRELVE AY 
Sbjct  544  VARQMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYSMATADIVDAEVRELVEKAYK  603

Query  138  RAKQIITTHIDILHKLAQLLIEKETVDGEE  49
            RA +IITTHIDILHKLAQLLIEKETV GE+
Sbjct  604  RATEIITTHIDILHKLAQLLIEKETVAGED  633


>gi|2492515|sp|Q39444|FTSH_CAPAN  Cell division protease ftsH homolog, chloroplast precursor
 gi|929013|emb|CAA62084.1|  ATPase [Capsicum annuum]
Length=662

 Score =  344 bits (882),  Expect = 2e-94
 Identities = 179/203 (88%), Positives = 188/203 (92%), Gaps = 1/203 (0%)
 Frame = -3

Query  678  DGXSDALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  499
            D  SDALERI+AGP +   + S  +++  VAYHEAGHALVGALMPEYDPVAKISIIPRGQ
Sbjct  461  DEISDALERIIAGPEKKNAVVSDEKKK-LVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  519

Query  498  AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSR  319
            AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG++NVTTGASNDFMQVSR
Sbjct  520  AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEDNVTTGASNDFMQVSR  579

Query  318  VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYT  139
            VARQMVER GFSKKIGQVAIGG GGNPFLGQQMS+QKDYSMATADVVDSEVRELVE AY 
Sbjct  580  VARQMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYSMATADVVDSEVRELVEKAYE  639

Query  138  RAKQIITTHIDILHKLAQLLIEK  70
            RAKQIITTHIDILHKLAQLLIEK
Sbjct  640  RAKQIITTHIDILHKLAQLLIEK  662


>gi|85376634|gb|ABC70534.1|  ATPase [Vitis pseudoreticulata]
Length=199

 Score =  152 bits (384),  Expect = 1e-36
 Identities = 78/96 (81%), Positives = 85/96 (88%), Gaps = 1/96 (1%)
 Frame = -3

Query  678  DGXSDALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  499
            D  SDALERI+AGP +   + S  +++  VAYHEAGHALVGALMPEYDPVAKISIIPRGQ
Sbjct  102  DEISDALERIIAGPEKKNAVVSDEKKK-LVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  160

Query  498  AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRV  391
            AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGR+
Sbjct  161  AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRL  196


>gi|87240674|gb|ABD32532.1|  Peptidase S26A, signal peptidase I; AAA ATPase; Peptidase M, 
neutral zinc metallopeptidases, zinc-binding site; Peptidase 
M41, FtsH extracellular [Medicago truncatula]
Length=671

 Score =  151 bits (382),  Expect = 2e-36
 Identities = 88/217 (40%), Positives = 134/217 (61%), Gaps = 10/217 (4%)
 Frame = -3

Query  666  DALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL  487
            D+++RI+AG     M   + +    VAYHE GHA+   L P +DPV K++++PRGQA GL
Sbjct  444  DSIDRIVAGMEGTTMTDGKCKI--LVAYHEVGHAICATLTPGHDPVQKVTLVPRGQAKGL  501

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
            T+F PS++     L S++ L  ++   LGGR AEEVIFG+  +TTGA+ D  Q++++ARQ
Sbjct  502  TWFIPSDDPF---LISKNQLFARIVGGLGGRAAEEVIFGETEITTGAAGDLQQITQIARQ  558

Query  306  MVERFGFSKKIGQVAIGGPG-GNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAK  130
            MV  +G S +IG   +  P   +  +  +M ++   S   A+ +D+ VR ++ETAY  AK
Sbjct  559  MVTTYGMS-EIGPWTLIDPSVQSSDVVLRMLARNSMSEKLAEDIDNSVRHIIETAYEVAK  617

Query  129  QIITTHIDILHKLAQLLIEKETVDGEEFMSL---FID  28
              I  + D + KL  +L+E ET+ G+EF S+   FID
Sbjct  618  NHIKNNRDAIDKLVDVLLENETLSGDEFKSILSEFID  654


>gi|84468286|dbj|BAE71226.1|  putative zinc dependent protease [Trifolium pratense]
Length=692

 Score =  151 bits (382),  Expect = 2e-36
 Identities = 87/224 (38%), Positives = 138/224 (61%), Gaps = 8/224 (3%)
 Frame = -3

Query  666  DALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL  487
            D+++RI+AG  EG ++ +  + +N VAYHE GHA+ G L P +DPV K++++PRGQA GL
Sbjct  465  DSIDRIVAG-MEGTVM-TDGKSKNLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGL  522

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
            T+F PSE+     L S+  L  ++   LGGR AEE+IFG+  VTTGA+ D  Q++ +A+Q
Sbjct  523  TWFIPSEDPT---LISKQQLFARIVGGLGGRAAEEIIFGEPEVTTGAAGDLQQITSLAKQ  579

Query  306  MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQ  127
            MV  FG S       + G   N  +  +M ++   S   A+ +DS ++ + + AY  A +
Sbjct  580  MVVTFGMSDIGPWSLMDGSAQNGDVIMRMMARNSMSEKLAEDIDSAIKRISDEAYEIALK  639

Query  126  IITTHIDILHKLAQLLIEKETVDGEEF---MSLFIDGKTELYVS  4
             I  + + + K+ ++L+EKET+ G+EF   +S F++   E  VS
Sbjct  640  HIRNNREAIDKIVEVLLEKETITGDEFRVLLSEFVEIPPENVVS  683


>gi|15010596|gb|AAK73957.1|  At2g30950/F7F1.16 [Arabidopsis thaliana]
 gi|20147395|gb|AAM10407.1|  At2g30950/F7F1.16 [Arabidopsis thaliana]
Length=339

 Score =  149 bits (375),  Expect = 1e-35
 Identities = 85/210 (40%), Positives = 132/210 (62%), Gaps = 6/210 (2%)
 Frame = -3

Query  666  DALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL  487
            D+++RI+AG  EG ++ +  + ++ VAYHE GHA+ G L P +D V K+++IPRGQA GL
Sbjct  106  DSIDRIVAG-MEGTVM-TDGKSKSLVAYHEVGHAVCGTLTPGHDAVQKVTLIPRGQARGL  163

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
            T+F PS+   +  L S+  L  ++   LGGR AEE+IFGD  VTTGA  D  Q++ +ARQ
Sbjct  164  TWFIPSD---DPTLISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGAVGDLQQITGLARQ  220

Query  306  MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQ  127
            MV  FG S  IG  ++        +  +M ++   S   A+ +DS V++L ++AY  A  
Sbjct  221  MVTTFGMS-DIGPWSLMDSSAQSDVIMRMMARNSMSEKLAEDIDSAVKKLSDSAYEIALS  279

Query  126  IITTHIDILHKLAQLLIEKETVDGEEFMSL  37
             I  + + + KL ++L+EKET+ G+EF ++
Sbjct  280  HIKNNREAMDKLVEVLLEKETIGGDEFRAI  309


>gi|30684767|ref|NP_850156.1|  VAR2 (VARIEGATED 2); ATP-dependent peptidase/ ATPase/ metallopeptidase/ 
zinc ion binding [Arabidopsis thaliana]
 gi|7650138|gb|AAF65925.1|AF135189_1  zinc dependent protease [Arabidopsis thaliana]
 gi|3201633|gb|AAC20729.1|  FtsH protease (VAR2) [Arabidopsis thaliana]
Length=695

 Score =  149 bits (375),  Expect = 1e-35
 Identities = 85/210 (40%), Positives = 132/210 (62%), Gaps = 6/210 (2%)
 Frame = -3

Query  666  DALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL  487
            D+++RI+AG  EG ++ +  + ++ VAYHE GHA+ G L P +D V K+++IPRGQA GL
Sbjct  462  DSIDRIVAG-MEGTVM-TDGKSKSLVAYHEVGHAVCGTLTPGHDAVQKVTLIPRGQARGL  519

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
            T+F PS+   +  L S+  L  ++   LGGR AEE+IFGD  VTTGA  D  Q++ +ARQ
Sbjct  520  TWFIPSD---DPTLISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGAVGDLQQITGLARQ  576

Query  306  MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQ  127
            MV  FG S  IG  ++        +  +M ++   S   A+ +DS V++L ++AY  A  
Sbjct  577  MVTTFGMS-DIGPWSLMDSSAQSDVIMRMMARNSMSEKLAEDIDSAVKKLSDSAYEIALS  635

Query  126  IITTHIDILHKLAQLLIEKETVDGEEFMSL  37
             I  + + + KL ++L+EKET+ G+EF ++
Sbjct  636  HIKNNREAMDKLVEVLLEKETIGGDEFRAI  665


>gi|66954652|dbj|BAD99306.1|  FtsH protease [Solanum lycopersicum]
Length=672

 Score =  147 bits (372),  Expect = 3e-35
 Identities = 87/213 (40%), Positives = 132/213 (61%), Gaps = 11/213 (5%)
 Frame = -3

Query  666  DALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL  487
            D+++RI+AG  EG  + +  + +  VAYHE GHA+   L P +D V K+++IPRGQA GL
Sbjct  445  DSIDRIVAG-MEGTTM-TDGKNKILVAYHEVGHAVCATLTPGHDAVQKVTLIPRGQARGL  502

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
            T+F P E+     L S+  L  ++   LGGR AEE+IFG+  +TTGA+ D  Q++++ARQ
Sbjct  503  TWFIPGEDPT---LISKKQLFARIVGGLGGRAAEEIIFGEPEITTGAAGDLQQITQIARQ  559

Query  306  MVERFGFSKKIGQVAIGGP---GGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTR  136
            MV  FG S +IG  A+  P    G+  L  +M ++   S   A+ +D  VR ++E AY  
Sbjct  560  MVTMFGMS-EIGPWALTDPAAQSGDVVL--RMLARNQMSEKLAEDIDESVRHIIERAYEI  616

Query  135  AKQIITTHIDILHKLAQLLIEKETVDGEEFMSL  37
            AK  I  + + + KL  +L+EKET+ G+EF ++
Sbjct  617  AKNHIRNNREAIDKLVDVLLEKETLTGDEFRAI  649


>gi|115469444|ref|NP_001058321.1|  Os06g0669400 [Oryza sativa (japonica cultivar-group)]
 gi|113596361|dbj|BAF20235.1|  Os06g0669400 [Oryza sativa (japonica cultivar-group)]
Length=609

 Score =  145 bits (365),  Expect = 2e-34
 Identities = 84/213 (39%), Positives = 135/213 (63%), Gaps = 11/213 (5%)
 Frame = -3

Query  666  DALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL  487
            D+++RI+AG  EG ++ +  + ++ VAYHE GHA+ G L P +DPV K+++IPRGQA GL
Sbjct  382  DSIDRIVAG-MEGTVM-TDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLIPRGQARGL  439

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
            T+F P +   +  L SR  L  ++   LGGR AEE+IFG+  VTTGA+ D  Q++ +A+Q
Sbjct  440  TWFIPMD---DPTLISRQQLFARIVGGLGGRAAEEIIFGEPEVTTGAAGDLQQITGLAKQ  496

Query  306  MVERFGFSKKIGQVAI---GGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTR  136
            MV  FG S  IG  ++   G   G+  +  +M ++   S   A+ +D+ V+ L + AY  
Sbjct  497  MVVTFGMS-DIGPWSLMDSGAQSGDVIM--RMMARNSMSEKLAEDIDTAVKRLSDEAYEI  553

Query  135  AKQIITTHIDILHKLAQLLIEKETVDGEEFMSL  37
            A   I ++ + + K+ ++L+EKET+ G+EF ++
Sbjct  554  ALSQIRSNREAMDKIVEVLLEKETLSGDEFRAI  586


>gi|91806862|gb|ABE66158.1|  FtsH protease [Arabidopsis thaliana]
Length=688

 Score =  145 bits (365),  Expect = 2e-34
 Identities = 83/211 (39%), Positives = 130/211 (61%), Gaps = 7/211 (3%)
 Frame = -3

Query  666  DALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL  487
            D+++RI+AG    KM+  + +    VAYHE GHA+   L   +DPV K++++PRGQA GL
Sbjct  459  DSIDRIVAGMEGTKMIDGKSKA--IVAYHEVGHAICATLTEGHDPVQKVTLVPRGQARGL  516

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
            T+F P E+     L S+  L  ++   LGGR AE+VIFG+  +TTGA+ D  QV+ +ARQ
Sbjct  517  TWFLPGEDPT---LVSKQQLFARIVGGLGGRAAEDVIFGEPEITTGAAGDLQQVTEIARQ  573

Query  306  MVERFGFSKKIGQVAIGGPG-GNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAK  130
            MV  FG S +IG  A+  P      +  +M ++   S   A+ +DS V++++  AY  AK
Sbjct  574  MVTMFGMS-EIGPWALTDPAVKQNDVVLRMLARNSMSEKLAEDIDSCVKKIIGDAYEVAK  632

Query  129  QIITTHIDILHKLAQLLIEKETVDGEEFMSL  37
            + +  + + + KL  +L+EKET+ G+EF ++
Sbjct  633  KHVRNNREAIDKLVDVLLEKETLTGDEFRAI  663


>gi|18417611|ref|NP_568311.1|  FTSH6; ATP-dependent peptidase/ ATPase/ metallopeptidase [Arabidopsis 
thaliana]
 gi|7671494|emb|CAB89335.1|  FtsH-like protein Pftf precursor-like [Arabidopsis thaliana]
Length=687

 Score =  145 bits (365),  Expect = 2e-34
 Identities = 83/211 (39%), Positives = 130/211 (61%), Gaps = 7/211 (3%)
 Frame = -3

Query  666  DALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL  487
            D+++RI+AG    KM+  + +    VAYHE GHA+   L   +DPV K++++PRGQA GL
Sbjct  458  DSIDRIVAGMEGTKMIDGKSKA--IVAYHEVGHAICATLTEGHDPVQKVTLVPRGQARGL  515

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
            T+F P E+     L S+  L  ++   LGGR AE+VIFG+  +TTGA+ D  QV+ +ARQ
Sbjct  516  TWFLPGEDPT---LVSKQQLFARIVGGLGGRAAEDVIFGEPEITTGAAGDLQQVTEIARQ  572

Query  306  MVERFGFSKKIGQVAIGGPG-GNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAK  130
            MV  FG S +IG  A+  P      +  +M ++   S   A+ +DS V++++  AY  AK
Sbjct  573  MVTMFGMS-EIGPWALTDPAVKQNDVVLRMLARNSMSEKLAEDIDSCVKKIIGDAYEVAK  631

Query  129  QIITTHIDILHKLAQLLIEKETVDGEEFMSL  37
            + +  + + + KL  +L+EKET+ G+EF ++
Sbjct  632  KHVRNNREAIDKLVDVLLEKETLTGDEFRAI  662


>gi|52075838|dbj|BAD45446.1|  putative FtsH-like protein Pftf precursor [Oryza sativa (japonica 
cultivar-group)]
Length=676

 Score =  145 bits (365),  Expect = 2e-34
 Identities = 84/213 (39%), Positives = 135/213 (63%), Gaps = 11/213 (5%)
 Frame = -3

Query  666  DALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL  487
            D+++RI+AG  EG ++ +  + ++ VAYHE GHA+ G L P +DPV K+++IPRGQA GL
Sbjct  449  DSIDRIVAG-MEGTVM-TDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLIPRGQARGL  506

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
            T+F P +   +  L SR  L  ++   LGGR AEE+IFG+  VTTGA+ D  Q++ +A+Q
Sbjct  507  TWFIPMD---DPTLISRQQLFARIVGGLGGRAAEEIIFGEPEVTTGAAGDLQQITGLAKQ  563

Query  306  MVERFGFSKKIGQVAI---GGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTR  136
            MV  FG S  IG  ++   G   G+  +  +M ++   S   A+ +D+ V+ L + AY  
Sbjct  564  MVVTFGMS-DIGPWSLMDSGAQSGDVIM--RMMARNSMSEKLAEDIDTAVKRLSDEAYEI  620

Query  135  AKQIITTHIDILHKLAQLLIEKETVDGEEFMSL  37
            A   I ++ + + K+ ++L+EKET+ G+EF ++
Sbjct  621  ALSQIRSNREAMDKIVEVLLEKETLSGDEFRAI  653


>gi|52075839|dbj|BAD45447.1|  putative chloroplast protease [Oryza sativa (japonica cultivar-group)]
Length=472

 Score =  145 bits (365),  Expect = 2e-34
 Identities = 84/213 (39%), Positives = 135/213 (63%), Gaps = 11/213 (5%)
 Frame = -3

Query  666  DALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL  487
            D+++RI+AG  EG ++ +  + ++ VAYHE GHA+ G L P +DPV K+++IPRGQA GL
Sbjct  245  DSIDRIVAG-MEGTVM-TDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLIPRGQARGL  302

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
            T+F P +   +  L SR  L  ++   LGGR AEE+IFG+  VTTGA+ D  Q++ +A+Q
Sbjct  303  TWFIPMD---DPTLISRQQLFARIVGGLGGRAAEEIIFGEPEVTTGAAGDLQQITGLAKQ  359

Query  306  MVERFGFSKKIGQVAI---GGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTR  136
            MV  FG S  IG  ++   G   G+  +  +M ++   S   A+ +D+ V+ L + AY  
Sbjct  360  MVVTFGMS-DIGPWSLMDSGAQSGDVIM--RMMARNSMSEKLAEDIDTAVKRLSDEAYEI  416

Query  135  AKQIITTHIDILHKLAQLLIEKETVDGEEFMSL  37
            A   I ++ + + K+ ++L+EKET+ G+EF ++
Sbjct  417  ALSQIRSNREAMDKIVEVLLEKETLSGDEFRAI  449


>gi|21954076|gb|AAK76625.2|  putative FtsH protease [Arabidopsis thaliana]
Length=501

 Score =  143 bits (361),  Expect = 5e-34
 Identities = 82/210 (39%), Positives = 132/210 (62%), Gaps = 6/210 (2%)
 Frame = -3

Query  666  DALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL  487
            D+++RI+AG  EG ++ +  + ++ VAYHE GHA+ G L P +D V K+++IPRGQA GL
Sbjct  271  DSIDRIVAG-MEGTVM-TDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTLIPRGQARGL  328

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
            T+F PS+   +  L S+  L  ++   LGGR AEEVIFG+  VTTGA +D  Q++ +A+Q
Sbjct  329  TWFIPSD---DPTLISKQQLFARIVGGLGGRAAEEVIFGESEVTTGAVSDLQQITGLAKQ  385

Query  306  MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQ  127
            MV  FG S +IG  ++        +  +M ++   S   A+ +D+ V+ L + AY  A  
Sbjct  386  MVTTFGMS-EIGPWSLMDSSEQSDVIMRMMARNSMSEKLANDIDTAVKTLSDKAYEIALS  444

Query  126  IITTHIDILHKLAQLLIEKETVDGEEFMSL  37
             I  + + + K+ ++L+EKET+ G+EF ++
Sbjct  445  QIRNNREAMDKIVEILLEKETMSGDEFRAI  474


>gi|6692685|gb|AAF24819.1|AC007592_12  F12K11.22 [Arabidopsis thaliana]
Length=662

 Score =  143 bits (361),  Expect = 5e-34
 Identities = 82/210 (39%), Positives = 132/210 (62%), Gaps = 6/210 (2%)
 Frame = -3

Query  666  DALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL  487
            D+++RI+AG  EG ++ +  + ++ VAYHE GHA+ G L P +D V K+++IPRGQA GL
Sbjct  455  DSIDRIVAG-MEGTVM-TDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTLIPRGQARGL  512

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
            T+F PS+   +  L S+  L  ++   LGGR AEEVIFG+  VTTGA +D  Q++ +A+Q
Sbjct  513  TWFIPSD---DPTLISKQQLFARIVGGLGGRAAEEVIFGESEVTTGAVSDLQQITGLAKQ  569

Query  306  MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQ  127
            MV  FG S +IG  ++        +  +M ++   S   A+ +D+ V+ L + AY  A  
Sbjct  570  MVTTFGMS-EIGPWSLMDSSEQSDVIMRMMARNSMSEKLANDIDTAVKTLSDKAYEIALS  628

Query  126  IITTHIDILHKLAQLLIEKETVDGEEFMSL  37
             I  + + + K+ ++L+EKET+ G+EF ++
Sbjct  629  QIRNNREAMDKIVEILLEKETMSGDEFRAI  658


>gi|42561751|ref|NP_563766.3|  FTSH8; ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc 
ion binding [Arabidopsis thaliana]
 gi|16930423|gb|AAL31897.1|AF419565_1  At1g06430/F12K11_24 [Arabidopsis thaliana]
 gi|27363292|gb|AAO11565.1|  At1g06430/F12K11_24 [Arabidopsis thaliana]
 gi|28392858|gb|AAO41866.1|  putative FtsH protease [Arabidopsis thaliana]
Length=685

 Score =  143 bits (361),  Expect = 5e-34
 Identities = 82/210 (39%), Positives = 132/210 (62%), Gaps = 6/210 (2%)
 Frame = -3

Query  666  DALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL  487
            D+++RI+AG  EG ++ +  + ++ VAYHE GHA+ G L P +D V K+++IPRGQA GL
Sbjct  455  DSIDRIVAG-MEGTVM-TDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTLIPRGQARGL  512

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
            T+F PS+   +  L S+  L  ++   LGGR AEEVIFG+  VTTGA +D  Q++ +A+Q
Sbjct  513  TWFIPSD---DPTLISKQQLFARIVGGLGGRAAEEVIFGESEVTTGAVSDLQQITGLAKQ  569

Query  306  MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQ  127
            MV  FG S +IG  ++        +  +M ++   S   A+ +D+ V+ L + AY  A  
Sbjct  570  MVTTFGMS-EIGPWSLMDSSEQSDVIMRMMARNSMSEKLANDIDTAVKTLSDKAYEIALS  628

Query  126  IITTHIDILHKLAQLLIEKETVDGEEFMSL  37
             I  + + + K+ ++L+EKET+ G+EF ++
Sbjct  629  QIRNNREAMDKIVEILLEKETMSGDEFRAI  658


>gi|84468324|dbj|BAE71245.1|  putative zinc dependent protease [Trifolium pratense]
Length=702

 Score =  143 bits (361),  Expect = 5e-34
 Identities = 81/210 (38%), Positives = 129/210 (61%), Gaps = 5/210 (2%)
 Frame = -3

Query  666  DALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL  487
            D+++RI+AG  EG ++ +  + ++ VAYHE GHA+ G L P +D V K+++IPRGQA GL
Sbjct  475  DSIDRIVAG-MEGTLM-TDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTLIPRGQARGL  532

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
            T+F PS+   +  L S+  L  ++   LGGR AEE+IFG+  VTTGA  D  Q++ +ARQ
Sbjct  533  TWFIPSD---DPTLISKQQLFARIVGGLGGRAAEEIIFGEPEVTTGAGGDLQQITGIARQ  589

Query  306  MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQ  127
            MV  FG S       +     +  +  +M ++   S   A+ +D+ V+ L + AY  A +
Sbjct  590  MVVTFGMSDIGPWSLMDSSAQSGDVIMRMMARNSMSEKLAEDIDTAVKRLSDEAYEIALE  649

Query  126  IITTHIDILHKLAQLLIEKETVDGEEFMSL  37
             I  + + + K+ ++L+EKET+ G+EF +L
Sbjct  650  QIRNNREAIDKIVEVLLEKETLSGDEFRAL  679


>gi|51535393|dbj|BAD37263.1|  putative chloroplast protease [Oryza sativa (japonica cultivar-group)]
 gi|51535559|dbj|BAD37477.1|  putative chloroplast protease [Oryza sativa (japonica cultivar-group)]
Length=686

 Score =  142 bits (359),  Expect = 9e-34
 Identities = 88/213 (41%), Positives = 128/213 (60%), Gaps = 10/213 (4%)
 Frame = -3

Query  666  DALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL  487
            D+++RI+AG     M   + +    VAYHE GHA+   L   +D V K+++IPRGQA GL
Sbjct  457  DSIDRIVAGLEGTSMTDGKSKM--LVAYHEIGHAVCATLTAGHDEVQKVTLIPRGQARGL  514

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
            T+F P EE  +  L SR  +   +   LGGR AEEV+FG+  VTTGA+ D  QV+RVAR+
Sbjct  515  TWFLPGEE--DPALVSRQQIFAGIVGGLGGRAAEEVVFGEPEVTTGAAGDLQQVTRVARR  572

Query  306  MVERFGFSKKIGQVAIGGP---GGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTR  136
            MV  FG S +IG  A+  P   GG+  L  +M ++   S   A  +D+ VR +V+ AY  
Sbjct  573  MVTAFGMS-EIGPWALAEPAAQGGDVVL--RMLARSSMSERLAADIDAAVRTIVDEAYEV  629

Query  135  AKQIITTHIDILHKLAQLLIEKETVDGEEFMSL  37
            AK  +  +   + +L  +L+EKET+ G+EF ++
Sbjct  630  AKAHVRRNRAAIDQLVDVLMEKETLGGDEFRAI  662


>gi|3808101|emb|CAA09935.1|  chloroplast protease [Capsicum annuum]
Length=693

 Score =  141 bits (356),  Expect = 2e-33
 Identities = 79/210 (37%), Positives = 132/210 (62%), Gaps = 5/210 (2%)
 Frame = -3

Query  666  DALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL  487
            D+++RI+AG  EG ++ +  + ++ VAYHE GHA+ G L P +DPV K+++IPRGQA GL
Sbjct  466  DSIDRIVAG-MEGTVM-TDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLIPRGQAKGL  523

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
            T+F P++   +  L S+  L  ++   LGGR AEEVIFG   VTTGA+ D  Q++ +A+Q
Sbjct  524  TWFIPAD---DPTLISKQQLFARIVGGLGGRAAEEVIFGAPEVTTGAAGDLQQITSLAKQ  580

Query  306  MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQ  127
            MV  FG S+      +     +  +  +M ++   S   A+ +D+ V+ L ++AY  A  
Sbjct  581  MVVTFGMSELGPWSLMDASAQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDSAYEIALS  640

Query  126  IITTHIDILHKLAQLLIEKETVDGEEFMSL  37
             I ++ + + K+ ++L+E+ET+ G+EF ++
Sbjct  641  QIRSNREAIDKIVEVLLEQETMTGDEFRAI  670


>gi|4325041|gb|AAD17230.1|  FtsH-like protein Pftf precursor [Nicotiana tabacum]
Length=693

 Score =  140 bits (352),  Expect = 6e-33
 Identities = 79/210 (37%), Positives = 130/210 (61%), Gaps = 5/210 (2%)
 Frame = -3

Query  666  DALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL  487
            D+++RI+AG  EG ++ +  + ++ VAYHE GHA+ G L P +D V K+++IPRGQA GL
Sbjct  466  DSIDRIVAG-MEGTVM-TDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTLIPRGQAKGL  523

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
            T+F P++   +  L S+  L  ++   LGGR AEEVIFG+  VTTGA+ D  Q++ +A+Q
Sbjct  524  TWFIPAD---DPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQ  580

Query  306  MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQ  127
            MV  FG S+      +     +  +  +M ++   S   A+ +D  V+ L ++AY  A  
Sbjct  581  MVVTFGMSELGPWSLMDSSAQSGDVIMRMMARNSMSEKLAEDIDGAVKRLSDSAYEIALT  640

Query  126  IITTHIDILHKLAQLLIEKETVDGEEFMSL  37
             I  + + + K+ ++L+EKET+ G+EF ++
Sbjct  641  HIRNNREAIDKIVEVLLEKETMTGDEFRAI  670


>gi|116059740|emb|CAL55447.1|  26S proteasome regulatory complex, ATPase RPT1 (ISS) [Ostreococcus 
tauri]
Length=662

 Score =  139 bits (349),  Expect = 1e-32
 Identities = 88/222 (39%), Positives = 117/222 (52%), Gaps = 47/222 (21%)
 Frame = -3

Query  669  SDALERILAGP-REGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG  493
            +DALERI+AG  REG ++  + +R   VAYHEAGHALVGALMP+YDP             
Sbjct  423  ADALERIIAGAAREGAVMSEKKKR--LVAYHEAGHALVGALMPDYDP-------------  467

Query  492  GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVA  313
                          G  S S+         GG  A  V           ++         
Sbjct  468  -------------GGPKSPSFH--------GGNAASRV----------PASTLXXXXXXX  496

Query  312  RQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRA  133
            R MVE+ GFSK+IGQ+AI   GG  FLG       DYS  TA +VD EV+ LV  AY RA
Sbjct  497  RMMVEQMGFSKRIGQIAIKTGGGQSFLGNDAGRAADYSATTAGIVDEEVKILVTAAYRRA  556

Query  132  KQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKTELYV  7
            K ++  +I +LH +A++L+EKE +DG+EF  + +  K+ELY+
Sbjct  557  KDLVQENIAVLHAVAEVLMEKENIDGDEFEQIMLKAKSELYL  598


>gi|116000717|emb|CAL50397.1|  AAA+-type ATPase (ISS) [Ostreococcus tauri]
Length=636

 Score =  139 bits (349),  Expect = 1e-32
 Identities = 85/213 (39%), Positives = 130/213 (61%), Gaps = 11/213 (5%)
 Frame = -3

Query  666  DALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL  487
            D+++RI+AG  EG  L S  + ++ VAYHE GHA+ G L P +D V K+++IPRGQA GL
Sbjct  407  DSVDRIVAG-MEGTRL-SDGKAKSLVAYHEVGHAICGTLTPGHDAVQKVTLIPRGQAKGL  464

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
            T+F P E   +  L S+  +  ++  ALGGR AEEVIFG+  VTTGAS+D  QV+ +A+Q
Sbjct  465  TWFIPGE---DPSLISKQQIFARVVGALGGRAAEEVIFGEAEVTTGASSDLNQVASMAKQ  521

Query  306  MVERFGFSKKIGQVAIGGP---GGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTR  136
            MV  FG S  +G  A+  P   GG+  +  +M ++   S   A+ +D   + + + AY  
Sbjct  522  MVTTFGMS-DVGPWALQDPSAQGGDMIM--RMMARNSMSEKLANDIDVATKRIADEAYEV  578

Query  135  AKQIITTHIDILHKLAQLLIEKETVDGEEFMSL  37
            A + I  + +++  + + L+E ET+ GE F  +
Sbjct  579  ALKHIRDNREVIDVITEELMEVETMTGERFREI  611


>gi|30526336|gb|AAP32310.1|  putative FtsH protease [Lycopersicon esculentum]
Length=714

 Score =  137 bits (345),  Expect = 4e-32
 Identities = 85/216 (39%), Positives = 122/216 (56%), Gaps = 14/216 (6%)
 Frame = -3

Query  663  ALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT  484
            A ++I+ G        SQ  R+   AYHE GHALV        PV K +I+PRG A G+ 
Sbjct  458  AKDKIMMGSERKSAFISQESRK-LTAYHEGGHALVAIHTDGALPVHKATIVPRGMALGMV  516

Query  483  FFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQM  304
               P ++       SR  +  ++ VA+GGRVAEE+IFG+  VT+G S+D  Q +++AR M
Sbjct  517  AQLPEKDETS---ISRKQMLARLDVAMGGRVAEELIFGESEVTSGPSDDLKQATKLARTM  573

Query  303  VERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQI  124
            V +FG SK++G V           G+ MS++      T  +++ EVREL+E AY  AK I
Sbjct  574  VTKFGMSKEVGLVTHNYDDN----GKSMSTE------TRLLIEKEVRELLERAYNNAKTI  623

Query  123  ITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKTE  16
            +TTH   LH LA  L+EKET+ G +  +L    K++
Sbjct  624  LTTHNKELHALANALLEKETLTGGQIKALLAQVKSQ  659


>gi|116055643|emb|CAL57728.1|  26S proteasome regulatory complex, ATPase RPT5 (ISS) [Ostreococcus 
tauri]
Length=610

 Score =  134 bits (337),  Expect = 3e-31
 Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 16/209 (7%)
 Frame = -3

Query  663  ALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT  484
            A +RIL G      + +   R+   AYHE GHALV        PV K +I+PRGQA G+ 
Sbjct  412  AKDRILMGAERTSAILTPENRK-LTAYHEGGHALVALRTKGARPVHKATIVPRGQALGMV  470

Query  483  FFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQM  304
               P ++ L+    +R  L   + V +GGRVAEE+IFG + +TTGAS+D  Q +R+AR+M
Sbjct  471  MQLPEKDELQM---TRRQLLAMLDVTMGGRVAEELIFGSDEITTGASSDLQQATRLAREM  527

Query  303  VERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQI  124
            V R+G S  +G            L  Q  +  + S  T  +++ EV+ +++ AY RAK +
Sbjct  528  VTRYGMSDTVG------------LASQDYASDELSSETRQLIEIEVKAMLDAAYKRAKDL  575

Query  123  ITTHIDILHKLAQLLIEKETVDGEEFMSL  37
            +T H   LH +A+ L++ E++ G E   L
Sbjct  576  LTKHEGDLHAIARRLLDSESLSGNELKEL  604


>gi|18401040|ref|NP_565616.1|  FTSH4; ATP-dependent peptidase/ ATPase/ metallopeptidase [Arabidopsis 
thaliana]
 gi|20197264|gb|AAC31223.2|  FtsH protease, putative [Arabidopsis thaliana]
Length=717

 Score =  130 bits (327),  Expect = 5e-30
 Identities = 84/227 (37%), Positives = 124/227 (54%), Gaps = 22/227 (9%)
 Frame = -3

Query  684  AXDGXSD--------ALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPV  529
            A DG  D        A +RI+ G      + S   R+   A+HE GHALV        PV
Sbjct  445  AMDGSKDVTMSDLEFAKDRIMMGSERKSAVISDESRK-LTAFHEGGHALVAIHTEGALPV  503

Query  528  AKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTG  349
             K +I+PRG A G+    P ++       SR  +  ++ V +GGRVAEE+IFG+  VT+G
Sbjct  504  HKATIVPRGMALGMVSQLPDKDETS---ISRKQMLARLDVCMGGRVAEELIFGESEVTSG  560

Query  348  ASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSE  169
            AS+D  Q +++AR MV +FG SK++G VA          G+ MS++      T  +++SE
Sbjct  561  ASSDLEQATKLARAMVTKFGMSKEVGLVAHNYDDN----GKSMSTE------TRLLIESE  610

Query  168  VRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFID  28
            V++L+E AY  AK I+T +   LH LA  L++ ET+ G++   L  D
Sbjct  611  VKQLLEKAYNNAKTILTVYNKELHALANALLQHETLSGKQIKELLTD  657


>gi|47969542|emb|CAG25608.1|  ftsH-like protease [Pisum sativum]
Length=706

 Score =  130 bits (326),  Expect = 6e-30
 Identities = 79/216 (36%), Positives = 122/216 (56%), Gaps = 14/216 (6%)
 Frame = -3

Query  663  ALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT  484
            A ++I+ G      + S+  R+   A+HE GHALV        PV K +I+PRG A G+ 
Sbjct  459  ARDKIMMGSERKSAVISEESRKT-TAFHEGGHALVAVHTDGALPVHKATIVPRGMALGMV  517

Query  483  FFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQM  304
               P +++     +SR  +  ++ V +GGRVAEE+IFG+  VT+GAS+D  Q + +AR+M
Sbjct  518  SQLPDKDQTS---HSRKQMLARLDVCMGGRVAEELIFGESEVTSGASSDLSQATSLAREM  574

Query  303  VERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQI  124
            V ++G S ++G V           G+ MSS+      T  +++ EV+ L+E AY  AK I
Sbjct  575  VTKYGMSTEVGPVTHNYYDN----GRSMSSE------TRLLIEKEVKNLLERAYNNAKTI  624

Query  123  ITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKTE  16
            +TTH   LH LA  L+E+ET+ G +   L    K++
Sbjct  625  LTTHEKELHALANALLEQETLTGSQINELLAKVKSQ  660


>gi|92898245|gb|ABE94111.1|  DNA repair protein RadA; Peptidase M41, FtsH [Medicago truncatula]
Length=707

 Score =  129 bits (324),  Expect = 1e-29
 Identities = 79/209 (37%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
 Frame = -3

Query  663  ALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT  484
            A ++IL G      + S+  R+   A+HE GHALV        PV K +I+PRG A G+ 
Sbjct  460  ARDKILMGSERKSAVISEETRK-MTAFHEGGHALVAIHSDGALPVHKATIVPRGMALGMV  518

Query  483  FFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQM  304
               P +++     +SR  +  ++ V +GGRVAEE+IFG+  VT+GAS+D  + +++ARQM
Sbjct  519  SQLPDKDQTS---HSRKQMLAELDVCMGGRVAEELIFGESEVTSGASSDLSKATKLARQM  575

Query  303  VERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQI  124
            V ++G S ++G V           G+ MSS+      T  +++ EV+ L+E AY  AK I
Sbjct  576  VTKYGMSTEVGPVTHNYYDD----GRSMSSE------TRLLIEKEVKNLLERAYNNAKTI  625

Query  123  ITTHIDILHKLAQLLIEKETVDGEEFMSL  37
            +TTH   LH LA  L+E ET+ G +   L
Sbjct  626  LTTHEKELHALANALLEHETLTGSQIKDL  654


>gi|15021761|gb|AAK77908.1|AF397903_1  AAA-metalloprotease FtsH [Pisum sativum]
Length=810

 Score =  129 bits (323),  Expect = 1e-29
 Identities = 76/213 (35%), Positives = 121/213 (56%), Gaps = 14/213 (6%)
 Frame = -3

Query  678  DGXSDALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  499
            D    A++RI+ G  +   + S++ RR  VAYHEAGHA+ G  +   DP+ K++I+PRG 
Sbjct  558  DHFEAAIDRIIGGLEKKNKVISKLERRT-VAYHEAGHAVTGWFLEHTDPLLKVTIVPRGT  616

Query  498  AG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVS  322
            A  G   + P+E  L++    +  L +   + LGGR AE+V+ G   ++TGA ND  +V+
Sbjct  617  AALGFAQYVPNENLLKT----KEQLFDMTCMTLGGRAAEKVLIG--TISTGAQNDLEKVT  670

Query  321  RVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAY  142
            ++    V  +GFS+K+G ++       P     M   K YS  T  ++D+EVRE V  AY
Sbjct  671  KMTYAQVAVYGFSEKVGLLSF------PQREDSMEMTKPYSSKTGAIIDTEVREWVNKAY  724

Query  141  TRAKQIITTHIDILHKLAQLLIEKETVDGEEFM  43
             R  Q+I  H   + ++A+LL+EKE +  E+ +
Sbjct  725  ERTIQLIEEHKAKVAEIAELLLEKEVLHQEDLL  757


>gi|52076370|dbj|BAD45191.1|  cell division protein ftsH (ftsH)-like [Oryza sativa (japonica 
cultivar-group)]
Length=294

 Score =  128 bits (322),  Expect = 2e-29
 Identities = 80/209 (38%), Positives = 115/209 (55%), Gaps = 14/209 (6%)
 Frame = -3

Query  663  ALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT  484
            A +RI+ G      + S   R+   AYHE GHALV        PV K +I+PRG A G+ 
Sbjct  42   AKDRIMMGSERKSAVISDESRK-LTAYHEGGHALVAIHTEGAHPVHKATIVPRGMALGMV  100

Query  483  FFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQM  304
               P ++       SR  +  ++ V +GGRVAEE+IFGD  VT+GAS+DF Q + VAR M
Sbjct  101  AQLPDKDETS---VSRKQMLARLDVCMGGRVAEELIFGDSEVTSGASSDFQQATAVARAM  157

Query  303  VERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQI  124
            V ++G SK++G V+          G+ MS++      T  +++ EV+  VE AY  AK I
Sbjct  158  VTKYGMSKQLGFVSYNYEDD----GKSMSTE------TRLLIEKEVKCFVENAYNNAKNI  207

Query  123  ITTHIDILHKLAQLLIEKETVDGEEFMSL  37
            +  H   LH LA  L+E ET+ G +  ++
Sbjct  208  LIKHNKELHALANALLEHETLTGAQIKNI  236


>gi|115437804|ref|NP_001043385.1|  Os01g0574500 [Oryza sativa (japonica cultivar-group)]
 gi|20521392|dbj|BAB91903.1|  cell division protein ftsH (ftsH)-like [Oryza sativa (japonica 
cultivar-group)]
 gi|113532916|dbj|BAF05299.1|  Os01g0574500 [Oryza sativa (japonica cultivar-group)]
Length=715

 Score =  128 bits (322),  Expect = 2e-29
 Identities = 80/209 (38%), Positives = 115/209 (55%), Gaps = 14/209 (6%)
 Frame = -3

Query  663  ALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT  484
            A +RI+ G      + S   R+   AYHE GHALV        PV K +I+PRG A G+ 
Sbjct  463  AKDRIMMGSERKSAVISDESRK-LTAYHEGGHALVAIHTEGAHPVHKATIVPRGMALGMV  521

Query  483  FFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQM  304
               P ++       SR  +  ++ V +GGRVAEE+IFGD  VT+GAS+DF Q + VAR M
Sbjct  522  AQLPDKDETS---VSRKQMLARLDVCMGGRVAEELIFGDSEVTSGASSDFQQATAVARAM  578

Query  303  VERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQI  124
            V ++G SK++G V+          G+ MS++      T  +++ EV+  VE AY  AK I
Sbjct  579  VTKYGMSKQLGFVSYNYEDD----GKSMSTE------TRLLIEKEVKCFVENAYNNAKNI  628

Query  123  ITTHIDILHKLAQLLIEKETVDGEEFMSL  37
            +  H   LH LA  L+E ET+ G +  ++
Sbjct  629  LIKHNKELHALANALLEHETLTGAQIKNI  657


>gi|85543015|gb|ABC71388.1|  putative FtsH protease [Triticum monococcum]
Length=531

 Score =  127 bits (319),  Expect = 4e-29
 Identities = 80/203 (39%), Positives = 113/203 (55%), Gaps = 14/203 (6%)
 Frame = -3

Query  663  ALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT  484
            A +RI+ G      + S   R+   AYHE GHALV        PV K +I+PRG A G+ 
Sbjct  335  AKDRIMMGSERKSAVISDECRK-LTAYHEGGHALVAMHTDGAHPVHKATIVPRGMALGMV  393

Query  483  FFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQM  304
               P ++       SR  +  ++ V +GGRVAEE+IFGD  VT+GAS+DF Q + +AR M
Sbjct  394  AQLPDKDETS---VSRKQMLARLDVCMGGRVAEELIFGDSEVTSGASSDFEQATLMARAM  450

Query  303  VERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQI  124
            V ++G SK++G V+          G+ MSS+      T  +++ EV+  +E AY  AK I
Sbjct  451  VTQYGMSKQVGLVSYNYEED----GKTMSSE------TRLLIEEEVKNFLEKAYNNAKAI  500

Query  123  ITTHIDILHKLAQLLIEKETVDG  55
            +T H   LH LA  L+E ET+ G
Sbjct  501  LTKHNKELHALANALLEHETMSG  523


>gi|115464291|ref|NP_001055745.1|  Os05g0458400 [Oryza sativa (japonica cultivar-group)]
 gi|113579296|dbj|BAF17659.1|  Os05g0458400 [Oryza sativa (japonica cultivar-group)]
Length=822

 Score =  126 bits (316),  Expect = 9e-29
 Identities = 72/208 (34%), Positives = 120/208 (57%), Gaps = 14/208 (6%)
 Frame = -3

Query  663  ALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GL  487
            A++RI+ G  +   + S++ RR  VAYHE+GHA+ G  +   +P+ K++I+PRG A  G 
Sbjct  574  AIDRIIGGLEKKNKVISKLERRT-VAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGF  632

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
              + P+E  L     ++  L +   + LGGR AEEV+ G   ++TGA ND  +V+++   
Sbjct  633  AQYVPNENLL----MTKEQLFDMTCMTLGGRAAEEVLIG--RISTGAQNDLEKVTKMTYA  686

Query  306  MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQ  127
             V  +GFS+K+G ++       P         K YS  TA ++D EVRE V  AY +  +
Sbjct  687  QVAVYGFSEKVGLLSF------PQRDDGFEMTKPYSNQTASIIDDEVREWVGKAYKKTVE  740

Query  126  IITTHIDILHKLAQLLIEKETVDGEEFM  43
            +IT H + + K+A++L+EKE +  ++ +
Sbjct  741  LITEHKEQVAKIAEMLLEKEVLHQDDLV  768


>gi|52353449|gb|AAU44017.1|  putative AAA-metalloprotease FtsH (fragment) [Oryza sativa (japonica 
cultivar-group)]
Length=475

 Score =  126 bits (316),  Expect = 9e-29
 Identities = 72/208 (34%), Positives = 120/208 (57%), Gaps = 14/208 (6%)
 Frame = -3

Query  663  ALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GL  487
            A++RI+ G  +   + S++ RR  VAYHE+GHA+ G  +   +P+ K++I+PRG A  G 
Sbjct  227  AIDRIIGGLEKKNKVISKLERRT-VAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGF  285

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
              + P+E  L     ++  L +   + LGGR AEEV+ G   ++TGA ND  +V+++   
Sbjct  286  AQYVPNENLL----MTKEQLFDMTCMTLGGRAAEEVLIG--RISTGAQNDLEKVTKMTYA  339

Query  306  MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQ  127
             V  +GFS+K+G ++       P         K YS  TA ++D EVRE V  AY +  +
Sbjct  340  QVAVYGFSEKVGLLSF------PQRDDGFEMTKPYSNQTASIIDDEVREWVGKAYKKTVE  393

Query  126  IITTHIDILHKLAQLLIEKETVDGEEFM  43
            +IT H + + K+A++L+EKE +  ++ +
Sbjct  394  LITEHKEQVAKIAEMLLEKEVLHQDDLV  421


>gi|115437800|ref|NP_001043384.1|  Os01g0574400 [Oryza sativa (japonica cultivar-group)]
 gi|20521391|dbj|BAB91902.1|  cell division protein-like [Oryza sativa (japonica cultivar-group)]
 gi|113532915|dbj|BAF05298.1|  Os01g0574400 [Oryza sativa (japonica cultivar-group)]
Length=709

 Score =  126 bits (316),  Expect = 9e-29
 Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 14/209 (6%)
 Frame = -3

Query  663  ALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT  484
            A +RI+ G      + S   R+   AYHE GHALV        PV K +I+PRG+  G+ 
Sbjct  456  AKDRIMMGSERKSAVISDESRK-LTAYHEGGHALVAIHTEGARPVHKATIVPRGRTLGMV  514

Query  483  FFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQM  304
               P ++      +SR  +   + V++ GRVAEE+IFGD  VT+GAS+DF   +++AR M
Sbjct  515  SQLPEKDETS---FSRKQMLAWLDVSMAGRVAEELIFGDSEVTSGASSDFQNATKMARAM  571

Query  303  VERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQI  124
            V ++G SK++G V+          G+ MS++      T  +++ EV+ L+E AY  AK I
Sbjct  572  VTKYGMSKQLGFVSYNYEDD----GKSMSTE------TRLLIEQEVKSLLENAYNNAKTI  621

Query  123  ITTHIDILHKLAQLLIEKETVDGEEFMSL  37
            +T H    H LAQ L+E ET+ G +   +
Sbjct  622  LTKHSKEHHVLAQALLEHETLTGAQIKKI  650


>gi|92898239|gb|ABE94105.1|  Peptidase M41 [Medicago truncatula]
Length=301

 Score =  125 bits (315),  Expect = 1e-28
 Identities = 78/216 (36%), Positives = 119/216 (55%), Gaps = 14/216 (6%)
 Frame = -3

Query  663  ALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT  484
            A ++I+ G      + S+  R+N  A+HE GHALV        PV K +I+PRG A G+ 
Sbjct  54   ARDKIIMGSERRSAVISEESRKN-TAFHEGGHALVAIHTDGALPVYKATIVPRGNALGMV  112

Query  483  FFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQM  304
               P ++      YSR  +   + V +GG VAEE++FG+  +T+G+S+D  + + VARQM
Sbjct  113  SQLPDKDITS---YSRKQMLANLDVCMGGLVAEELVFGENELTSGSSSDLSKATNVARQM  169

Query  303  VERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQI  124
            V  FG S ++G+V           G+ MSS+      T  +++ EV++L + AY  AK I
Sbjct  170  VTEFGMSTEVGRVTHNYYDD----GRSMSSE------TRLLIEKEVKKLFDRAYKNAKTI  219

Query  123  ITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKTE  16
            +TTH   LH LA  L+E ET+ G +   L    K++
Sbjct  220  LTTHEKELHALANALMEHETLTGSQIKELLAKVKSQ  255


>gi|115440989|ref|NP_001044774.1|  Os01g0842600 [Oryza sativa (japonica cultivar-group)]
 gi|19571026|dbj|BAB86453.1|  putative AAA-metalloprotease FtsH [Oryza sativa (japonica cultivar-group)]
 gi|113534305|dbj|BAF06688.1|  Os01g0842600 [Oryza sativa (japonica cultivar-group)]
Length=802

 Score =  124 bits (312),  Expect = 3e-28
 Identities = 70/210 (33%), Positives = 121/210 (57%), Gaps = 14/210 (6%)
 Frame = -3

Query  663  ALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GL  487
            A++R++ G  +   + S++ RR  VAYHE+GHA+ G  +   +P+ K++I+PRG A  G 
Sbjct  559  AIDRVIGGLEKKNKVISKLERRT-VAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGF  617

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
              + P++  L     ++  L +   + LGGR AEEV+ G   ++TGA ND  +V+++   
Sbjct  618  AQYVPNDNLL----MTKEQLFDMTCMTLGGRAAEEVLIG--KISTGAQNDLEKVTKMTYA  671

Query  306  MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQ  127
             V  +GFS+K+G ++       P         K YS  TA ++D+EVRE V  AY +  +
Sbjct  672  QVAVYGFSEKVGLLSF------PQREDGFEMSKPYSSQTASIIDTEVREWVAKAYEKTVE  725

Query  126  IITTHIDILHKLAQLLIEKETVDGEEFMSL  37
            +I  H D + ++A+LL+EKE +  ++ + +
Sbjct  726  LIKQHKDQVAQIAELLLEKEVLHQDDLVQV  755


>gi|92873588|gb|ABE82014.1|  AAA ATPase; Bacterial luciferase-like; Peptidase M41, FtsH extracellular 
[Medicago truncatula]
Length=807

 Score =  124 bits (311),  Expect = 3e-28
 Identities = 76/215 (35%), Positives = 121/215 (56%), Gaps = 16/215 (7%)
 Frame = -3

Query  678  DGXSDALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  499
            D    A++RI+ G  +   + S+  RR  VAYHEAGHA+ G  +   +P+ K++I+PRG 
Sbjct  557  DHFEAAIDRIIGGLEKKNRVISKRERRT-VAYHEAGHAVAGWFLEHCEPLLKVTIVPRGT  615

Query  498  AG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVS  322
            A  G   + PSE  L +    +  L +   + LGGR AE+V+ G   ++TGA ND  +V+
Sbjct  616  AALGFAQYVPSENLLRT----KEQLLDMTCMTLGGRAAEQVLIGA--ISTGAQNDLEKVT  669

Query  321  RVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAY  142
            ++    V  +GFS+K+G ++   P      G      K YS  T +++D EVR+ V  AY
Sbjct  670  KMTYAQVAIYGFSEKVGLLSF--PQNEDQFG------KPYSGDTGNIIDQEVRDWVNHAY  721

Query  141  TRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL  37
             R  Q+I  H + L ++A+LL+EKE +  E+ + +
Sbjct  722  ERTVQLIEEHKEKLAQIAELLLEKEVLHQEDLVRI  756


>gi|92898241|gb|ABE94107.1|  AAA ATPase; Peptidase M41, FtsH [Medicago truncatula]
Length=745

 Score =  123 bits (308),  Expect = 7e-28
 Identities = 77/216 (35%), Positives = 118/216 (54%), Gaps = 14/216 (6%)
 Frame = -3

Query  663  ALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT  484
            A ++I+ G      + S+  R+   A+HE GHALV        PV K +I+PRG A G+ 
Sbjct  458  ARDKIMMGSERKSAVISEESRK-ITAFHEGGHALVAIHTDGAFPVHKATIVPRGTALGMV  516

Query  483  FFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQM  304
               P +++     +SR  +  ++ V +GGRVAEE+IFG+  VT+GA +D    + +AR+M
Sbjct  517  SQLPDKDQ---NTHSRKQMLAELDVCMGGRVAEELIFGESEVTSGAYSDLSNATSLAREM  573

Query  303  VERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQI  124
            V  +G S ++G V           G+ MSS+      T  +++ EV+ L+E AY  AK I
Sbjct  574  VAEYGMSTEVGPVTHNYYDD----GRSMSSE------TRLLIEKEVKNLLERAYNNAKFI  623

Query  123  ITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKTE  16
            +TTH   LH LA  L+E ET+ G +   L    K++
Sbjct  624  LTTHDKELHALANALLEHETLTGSQIKELLAKVKSQ  659


>gi|116060233|emb|CAL56292.1|  AAA+-type ATPase (ISS) [Ostreococcus tauri]
Length=795

 Score =  122 bits (307),  Expect = 1e-27
 Identities = 74/209 (35%), Positives = 114/209 (54%), Gaps = 10/209 (4%)
 Frame = -3

Query  663  ALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT  484
            A +R+L G      + S+  RR   AYHEAGHALV        P+ K +I+PRG A G+ 
Sbjct  536  ARDRVLMGAERKSAVLSEENRR-LTAYHEAGHALVALKTDATLPIHKATIMPRGSALGMV  594

Query  483  FFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQM  304
               P ++       +R  L  ++ V +GGR+AEE+IFG + VTTGAS D  Q +R+A  M
Sbjct  595  MQLPDKDETS---VNRKQLMARLDVCMGGRLAEELIFGPDEVTTGASGDLQQATRLAFYM  651

Query  303  VERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQI  124
            +   G +  +G V +    G    G+  S       +T   VD+EV +L++ + TR +++
Sbjct  652  ISDVGMNSNLGPVHLSSIRGGGAAGRGASG------STESAVDAEVIKLLKESQTRVQKL  705

Query  123  ITTHIDILHKLAQLLIEKETVDGEEFMSL  37
            + ++   LH +A+ L+EKET+ G E   L
Sbjct  706  LKSNARDLHTIAKALMEKETLTGNEIREL  734


>gi|92868752|gb|ABE78727.1|  AAA ATPase; Peptidase M41, FtsH extracellular [Medicago truncatula]
Length=681

 Score =  121 bits (303),  Expect = 3e-27
 Identities = 69/215 (32%), Positives = 123/215 (57%), Gaps = 14/215 (6%)
 Frame = -3

Query  678  DGXSDALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQ  499
            D    A++RI+ G  +   + S+  RR  VAYHEAGH + G  +   +P+ K++I+PRG 
Sbjct  434  DHFEAAIDRIIGGLEKKNKVISKKDRRT-VAYHEAGHVVAGWFLEHTEPLLKVTIVPRGT  492

Query  498  AG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVS  322
            A  G   F P+++     L ++  L ++  + LGGR AE+V+ G   ++TGA ND  +V+
Sbjct  493  AALGFAQFVPNDDH----LMTKEQLFDRTCMTLGGRAAEQVLIG--RISTGAQNDLEKVT  546

Query  321  RVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAY  142
            ++    V  +GFS+K+G ++       P +     + K YS  T+ ++D+EVR+ V+ AY
Sbjct  547  KMTYAQVTVYGFSEKVGLLSF------PSIEDSFETSKPYSSETSAIIDNEVRDWVKKAY  600

Query  141  TRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL  37
                ++I  +   + ++A+LL+EKE +  +E + +
Sbjct  601  KHTIELIEEYKGKVAEVAELLLEKEVLHQDELLKV  635


>gi|62319661|dbj|BAD95179.1|  zinc dependent protease [Arabidopsis thaliana]
Length=197

 Score =  120 bits (300),  Expect = 6e-27
 Identities = 68/170 (40%), Positives = 104/170 (61%), Gaps = 4/170 (2%)
 Frame = -3

Query  546  PEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGD  367
            P +D V K+++IPRGQA GLT+F PS++     L S+  L  ++   LGGR AEE+IFGD
Sbjct  2    PGHDAVQKVTLIPRGQARGLTWFIPSDDPT---LISKQQLFARIVGGLGGRAAEEIIFGD  58

Query  366  ENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATA  187
              VTTGA  D  Q++ +ARQMV  FG S  IG  ++        +  +M ++   S   A
Sbjct  59   SEVTTGAVGDLQQITGLARQMVTTFGMS-DIGPWSLMDSSAQSDVIMRMMARNSMSEKLA  117

Query  186  DVVDSEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL  37
            + +DS V++L ++AY  A   I  + + + KL ++L+EKET+ G+EF ++
Sbjct  118  EDIDSAVKKLSDSAYEIALSHIKNNREAMDKLVEVLLEKETIGGDEFRAI  167


>gi|22329400|ref|NP_172231.2|  FTSH10; ATP binding / ATPase/ metalloendopeptidase/ nucleoside-triphosphatase/ 
nucleotide binding [Arabidopsis thaliana]
 gi|17381253|gb|AAL36045.1|  At1g07510/F22G5_9 [Arabidopsis thaliana]
 gi|21700787|gb|AAM70517.1|  At1g07510/F22G5_9 [Arabidopsis thaliana]
Length=813

 Score =  119 bits (299),  Expect = 8e-27
 Identities = 74/224 (33%), Positives = 124/224 (55%), Gaps = 21/224 (9%)
 Frame = -3

Query  663  ALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GL  487
            A++R++ G  +   + S++ RR  VAYHE+GHA+ G  +   +P+ K++I+PRG A  G 
Sbjct  566  AIDRVIGGLEKKNRVISKLERRT-VAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGF  624

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
              + P+E  L     ++  L +   + LGGR AE+V+ G   ++TGA ND  +V+++   
Sbjct  625  AQYVPNENLL----MTKEQLFDMTCMTLGGRAAEQVLIG--RISTGAQNDLEKVTKMTYA  678

Query  306  MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQ  127
             V  +GFS KIG ++        F  ++    K YS  T  ++D EVRE V  AY R  +
Sbjct  679  QVAVYGFSDKIGLLS--------FPQREDEFSKPYSNRTGAMIDEEVREWVGKAYKRTVE  730

Query  126  IITTHIDILHKLAQLLIEKETVDGEEFMSL-----FIDGKTELY  10
            +I  H + + ++A+LL+EKE +  ++   +     F  G+T  Y
Sbjct  731  LIEEHKEQVAQIAELLLEKEVLHQDDLTKVLGERPFKSGETTNY  774


>gi|110740655|dbj|BAE98430.1|  AAA-type like ATPase [Arabidopsis thaliana]
Length=326

 Score =  118 bits (296),  Expect = 2e-26
 Identities = 68/210 (32%), Positives = 118/210 (56%), Gaps = 14/210 (6%)
 Frame = -3

Query  663  ALERILAGPREGKMLXSQMRRRNXVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GL  487
            A++R++ G  +   + S++ RR  VAYHE+GHA+VG  +   +P+ K++I+PRG A  G 
Sbjct  90   AIDRVIGGLEKKNRVISKLERRT-VAYHESGHAVVGWFLEHAEPLLKVTIVPRGAAALGF  148

Query  486  TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQ  307
              + P+E      L ++  L +   + LGGR AE+V+ G   ++TGA ND  +V+++   
Sbjct  149  AQYVPNENL----LMTKEQLFDMTCMTLGGRAAEQVLIG--KISTGAQNDLEKVTKMTYA  202

Query  306  MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDSEVRELVETAYTRAKQ  127
             V  +GFS K+G ++       P         K YS  T  ++D EVR+ V  AY R  +
Sbjct  203  QVAVYGFSDKVGLLSF------PPRDDGYDFSKPYSNKTGAIIDEEVRDWVAKAYERTVE  256

Query  126  IITTHIDILHKLAQLLIEKETVDGEEFMSL  37
            ++  H   + ++A+LL+EKE +  ++ + +
Sbjct  257  LVEEHKVKVAEIAELLLEKEVLHQDDLLKI  286
Distribution of 100 Blast Hits on the Query Sequence
