Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168928155-22158-109126882979.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig68 Length=623
Score E Sequences producing significant alignments: (Bits) Value gi|15221583|ref|NP_176466.1| unknown protein [Arabidopsis tha... 254 2e-67 gi|6630456|gb|AAF19544.1|AC007190_12 F23N19.15 [Arabidopsis thal 232 7e-61 gi|116310889|emb|CAH67829.1| B0616E02-H0507E05.5 [Oryza sativa ( 221 2e-57 gi|115456822|ref|NP_001052011.1| Os04g0105700 [Oryza sativa (... 221 2e-57 gi|116000362|emb|CAL50042.1| OSJNBb0004G23.6 [Oryza sativa (ISS) 77.8 3e-14 gi|15221524|ref|NP_177046.1| unknown protein [Arabidopsis tha... 40.0 0.007 gi|92871678|gb|ABE80616.1| Ribosomal L22e protein [Medicago trun 35.4 0.17 gi|15219177|ref|NP_173619.1| unknown protein [Arabidopsis thalia 35.0 0.22 gi|116055945|emb|CAL58478.1| Myosin class II heavy chain (ISS) [ 34.7 0.29 gi|115474029|ref|NP_001060613.1| Os07g0674200 [Oryza sativa (... 34.7 0.29 gi|9280675|gb|AAF86544.1|AC069252_3 F2E2.4 [Arabidopsis thaliana 34.3 0.37 gi|115452955|ref|NP_001050078.1| Os03g0343500 [Oryza sativa (... 33.5 0.64 gi|20197836|gb|AAM15274.1| disease resistance protein (TIR-NB... 33.1 0.83 gi|15227238|ref|NP_179024.1| ATP binding / nucleoside-triphos... 33.1 0.83 gi|15221511|ref|NP_172140.1| unknown protein [Arabidopsis tha... 33.1 0.83 gi|25408221|pir||F84730 probable myosin heavy chain [imported] - 33.1 0.83 gi|15217717|ref|NP_174651.1| GTP binding [Arabidopsis thalian... 32.7 1.1 gi|18400085|ref|NP_564471.1| unknown protein [Arabidopsis tha... 32.7 1.1 gi|15230008|ref|NP_187207.1| structural constituent of riboso... 32.7 1.1 gi|110741853|dbj|BAE98868.1| hypothetical protein [Arabidopsis t 32.3 1.4 gi|92878318|gb|ABE84977.1| Ribosomal L22e protein [Medicago trun 32.3 1.4 gi|6006862|gb|AAF00638.1|AC009540_15 unknown protein [Arabidopsi 32.3 1.4 gi|42572237|ref|NP_974213.1| binding [Arabidopsis thaliana] 32.3 1.4 gi|30678939|ref|NP_187029.2| binding [Arabidopsis thaliana] 32.3 1.4 gi|26449496|dbj|BAC41874.1| unknown protein [Arabidopsis thalian 32.3 1.4 gi|4887746|gb|AAD32282.1| putative unconventional myosin [Arabid 32.0 1.9 gi|42569537|ref|NP_180749.2| XIF [Arabidopsis thaliana] 32.0 1.9 gi|115468650|ref|NP_001057924.1| Os06g0574200 [Oryza sativa (... 32.0 1.9 gi|116058761|emb|CAL54468.1| unnamed protein product [Ostreococc 31.6 2.4 gi|116055271|emb|CAL57667.1| unnamed protein product [Ostreococc 31.6 2.4 gi|115445637|ref|NP_001046598.1| Os02g0293300 [Oryza sativa (... 31.2 3.2 gi|15241051|ref|NP_198129.1| structural constituent of riboso... 31.2 3.2 gi|92895830|gb|ABE92854.1| Ribosomal L22e protein [Medicago trun 30.8 4.1 gi|92893109|gb|ABE91623.1| Prefoldin [Medicago truncatula] 30.0 7.1 gi|18414346|ref|NP_567450.1| unknown protein [Arabidopsis tha... 30.0 7.1 gi|16604571|gb|AAL24087.1| unknown protein [Arabidopsis thaliana 30.0 7.1 gi|4263830|gb|AAD15473.1| hypothetical protein [Arabidopsis thal 30.0 7.1 gi|79316384|ref|NP_001030944.1| unknown protein [Arabidopsis tha 30.0 7.1 gi|42572911|ref|NP_974552.1| unknown protein [Arabidopsis thalia 30.0 7.1 gi|115434896|ref|NP_001042206.1| Os01g0180300 [Oryza sativa (... 30.0 7.1 gi|115445053|ref|NP_001046306.1| Os02g0218600 [Oryza sativa (... 30.0 7.1 gi|6685541|sp|Q9XHR2|IF3A_MAIZE Eukaryotic translation initia... 30.0 7.1 gi|886742|emb|CAA58117.1| heat shock factor [Zea mays] 29.6 9.2 gi|8671781|gb|AAF78387.1|AC069551_20 T10O22.16 [Arabidopsis thal 29.6 9.2
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 391 Number of extensions: 5 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 623 Length of database: 101054579 Length adjustment: 108 Effective length of query: 515 Effective length of database: 70452887 Effective search space: 6974835813 Effective search space used: 6974835813 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 65 (29.6 bits)