Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168928617-14799-84667112812.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig76 Length=380
Score E Sequences producing significant alignments: (Bits) Value gi|21592396|gb|AAM64347.1| unknown [Arabidopsis thaliana] 180 1e-45 gi|15240479|ref|NP_198080.1| unknown protein [Arabidopsis tha... 180 1e-45 gi|115470026|ref|NP_001058612.1| Os06g0724400 [Oryza sativa (... 173 2e-43 gi|54291010|dbj|BAD61688.1| unknown protein [Oryza sativa (ja... 173 2e-43 gi|22330506|ref|NP_177040.2| unknown protein [Arabidopsis tha... 78.6 6e-15 gi|115438346|ref|NP_001043517.1| Os01g0605200 [Oryza sativa (... 76.6 2e-14 gi|53791547|dbj|BAD52669.1| putative zinc ribbon 1 [Oryza sativa 76.6 2e-14 gi|48596291|emb|CAD45038.1| ETCHED1 protein [Zea mays] >gi|48... 76.6 2e-14 gi|48596295|emb|CAD45040.1| zinc ribbon 1 [Zea mays] 76.3 3e-14 gi|116055496|emb|CAL58164.1| ETCHED1 protein (ISS) [Ostreococcus 63.5 2e-10 gi|115449725|ref|NP_001048537.1| Os02g0819700 [Oryza sativa (... 51.2 1e-06 gi|110743001|dbj|BAE99394.1| hypothetical protein [Arabidopsis t 45.4 6e-05 gi|29028810|gb|AAO64784.1| At3g54830 [Arabidopsis thaliana] 45.4 6e-05 gi|79607906|ref|NP_974434.2| unknown protein [Arabidopsis thalia 45.4 6e-05 gi|92885513|gb|ABE87819.1| Zinc finger, Zim17-type [Medicago tru 43.9 2e-04 gi|116000488|emb|CAL50168.1| zinc finger (DNL type) protein-r... 42.4 5e-04 gi|114261|sp|P19252|ASNS2_PEA Asparagine synthetase, root [gl... 34.3 0.13 gi|115474849|ref|NP_001061021.1| Os08g0155700 [Oryza sativa (... 32.3 0.50 gi|1351985|sp|P49093|ASNS2_LOTJA Asparagine synthetase [gluta... 32.3 0.50 gi|3821280|emb|CAA08913.1| asparagine synthetase type II [Phaseo 31.2 1.1 gi|1778370|gb|AAC49613.1| asparagine synthetase 2 [Glycine max] 31.2 1.1 gi|1351983|sp|P49092|ASNS1_LOTJA Asparagine synthetase [gluta... 31.2 1.1 gi|50251735|dbj|BAD27655.1| hypothetical protein [Oryza sativ... 30.8 1.5 gi|37718901|gb|AAR01772.1| hypothetical protein [Oryza sativa (j 30.0 2.5 gi|18736|emb|CAA36736.1| DNA-directed RNA polymerase [Glycine ma 30.0 2.5 gi|77555658|gb|ABA98454.1| retrotransposon protein, putative,... 30.0 2.5 gi|68124015|emb|CAJ01915.1| DNA-directed RNA polymerase [Solanum 29.6 3.3 gi|16494|emb|CAA36735.1| DNA-directed RNA polymerase [Arabidopsi 29.6 3.3 gi|1771880|emb|CAA96526.1| asparagine synthetase [Vicia faba] 29.6 3.3 gi|15233976|ref|NP_193602.1| protein binding [Arabidopsis tha... 29.6 3.3 gi|16505|emb|CAA37130.1| RNA polymerase II [Arabidopsis thaliana 29.6 3.3 gi|3449378|gb|AAC67237.1| plant resistance protein [Lycopersicon 29.6 3.3 gi|3426261|gb|AAC32253.1| disease resistance gene homolog Mi-... 29.6 3.3 gi|51535649|dbj|BAD37622.1| hypothetical protein [Oryza sativa ( 29.6 3.3 gi|15233338|ref|NP_195305.1| NRPB1 (RNA POLYMERASE II LARGE S... 29.6 3.3 gi|110741686|dbj|BAE98789.1| hypothetical protein [Arabidopsis t 29.3 4.3 gi|19699035|gb|AAL91002.1| asparagine synthetase [Securigera par 29.3 4.3 gi|114260|sp|P19251|ASNS1_PEA Asparagine synthetase, nodule [... 29.3 4.3 gi|8099161|dbj|BAA96252.1| asparagine synthetase [Astragalus sin 29.3 4.3 gi|19702560|gb|AAL93300.1|AF488726_1 asparagine synthetase [Secu 28.9 5.6 gi|28394774|gb|AAO38524.1| asparagine synthetase [Securigera par 28.9 5.6 gi|8778315|gb|AAF79324.1|AC002304_17 F14J16.29 [Arabidopsis thal 28.9 5.6 gi|77557017|gb|ABA99813.1| retrotransposon protein, putative,... 28.9 5.6 gi|115381098|gb|ABI96213.1| truncated NBS-LRR resistance prot... 28.5 7.3 gi|115483300|ref|NP_001065320.1| Os10g0550700 [Oryza sativa (... 28.5 7.3 gi|6010228|emb|CAB57292.1| asparagine synthetase (type-I) [Phase 28.5 7.3 gi|77819909|gb|ABB04097.1| asparagine synthetase [Glycine max] 28.5 7.3 gi|47824975|gb|AAT38748.1| hypothetical protein SDM1_42t00001 [S 28.1 9.5 gi|6573752|gb|AAF17672.1|AC009398_21 F20B24.6 [Arabidopsis thali 28.1 9.5 gi|115488632|ref|NP_001066803.1| Os12g0493900 [Oryza sativa (... 28.1 9.5 gi|15218591|ref|NP_172532.1| ATP binding / kinase/ protein ki... 28.1 9.5 gi|115478374|ref|NP_001062782.1| Os09g0287000 [Oryza sativa (... 28.1 9.5 gi|15235319|ref|NP_192140.1| unknown protein [Arabidopsis tha... 28.1 9.5 gi|15226788|ref|NP_181626.1| ERS1 (ETHYLENE RESPONSE SENSOR 1... 28.1 9.5
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 266 Number of extensions: 7 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 380 Length of database: 101054579 Length adjustment: 93 Effective length of query: 287 Effective length of database: 74703122 Effective search space: 2465203026 Effective search space used: 2465203026 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)