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BLASTX 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168928628-30111-201925541760.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig77
Length=706


Distribution of 11 Blast Hits on the Query Sequence



                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|6478916|gb|AAF14021.1|AC011436_5  unknown protein [Arabidopsis   100    2e-22
gi|21593340|gb|AAM65289.1|  unknown [Arabidopsis thaliana]          100    2e-22 UniGene info
gi|18398425|ref|NP_566346.1|  transcriptional elongation regul...   100    2e-22 UniGene infoGene info
gi|92876119|gb|ABE83852.1|  NusG [Medicago truncatula]             85.5    4e-19
gi|115456311|ref|NP_001051756.1|  Os03g0825500 [Oryza sativa (...  57.8    4e-08 Gene info
gi|115475319|ref|NP_001061256.1|  Os08g0210500 [Oryza sativa (...  30.4    6.8   Gene info
Alignments
>gi|6478916|gb|AAF14021.1|AC011436_5 unknown protein [Arabidopsis thaliana] Length=332 Score = 100 bits (250), Expect(2) = 2e-22 Identities = 53/119 (44%), Positives = 78/119 (65%), Gaps = 0/119 (0%) Frame = -3 Query 653 RRAKKKLIKHFKKNRKEKNPSQLIS*M*NII*IPNGVTPPILDSKPKRQSRKRYDTVANR 474 + A++K F++ + + + +++ + + V + +SKPKR RK + Sbjct 211 KEAQEKADSEFEEADRAEEEASILASQELLALSNSDVIETVAESKPKRAPRKATLATETK 270 Query 473 AKSSKLVPGSMVRVVSGTFAEFLGSLEKLNRKTGKATVGFTLFGKESLVELDVKDIVLE 297 AK KL GS VRV+SGTFAEF+G+L+KLNRKT KATVGFTLFGKE+LVE+D+ ++V E Sbjct 271 AKKKKLAAGSTVRVLSGTFAEFVGNLKKLNRKTAKATVGFTLFGKETLVEIDINELVPE 329 Score = 25.4 bits (54), Expect(2) = 2e-22 Identities = 11/18 (61%), Positives = 12/18 (66%), Gaps = 0/18 (0%) Frame = -1 Query 697 PVSDDDMEAISNQPKEEQ 644 PV D D+EAI Q KE Q Sbjct 197 PVDDSDLEAIFKQAKEAQ 214 >gi|21593340|gb|AAM65289.1| UniGene info unknown [Arabidopsis thaliana] Length=333 Score = 100 bits (250), Expect(2) = 2e-22 Identities = 53/119 (44%), Positives = 78/119 (65%), Gaps = 0/119 (0%) Frame = -3 Query 653 RRAKKKLIKHFKKNRKEKNPSQLIS*M*NII*IPNGVTPPILDSKPKRQSRKRYDTVANR 474 + A++K F++ + + + +++ + + V + +SKPKR RK + Sbjct 212 KEAQEKADSEFEEADRAEEEASILASQELLALSNSDVIETVAESKPKRAPRKATLATETK 271 Query 473 AKSSKLVPGSMVRVVSGTFAEFLGSLEKLNRKTGKATVGFTLFGKESLVELDVKDIVLE 297 AK KL GS VRV+SGTFAEF+G+L+KLNRKT KATVGFTLFGKE+LVE+D+ ++V E Sbjct 272 AKKKKLAAGSTVRVLSGTFAEFVGNLKKLNRKTAKATVGFTLFGKETLVEIDINELVPE 330 Score = 25.4 bits (54), Expect(2) = 2e-22 Identities = 11/18 (61%), Positives = 12/18 (66%), Gaps = 0/18 (0%) Frame = -1 Query 697 PVSDDDMEAISNQPKEEQ 644 PV D D+EAI Q KE Q Sbjct 198 PVDDSDLEAIFKQAKEAQ 215 >gi|18398425|ref|NP_566346.1| UniGene infoGene info transcriptional elongation regulator [Arabidopsis thaliana] gi|15146210|gb|AAK83588.1| UniGene infoGene info AT3g09210/F3L24_8 [Arabidopsis thaliana] gi|22136582|gb|AAM91077.1| UniGene infoGene info AT3g09210/F3L24_8 [Arabidopsis thaliana] Length=333 Score = 100 bits (250), Expect(2) = 2e-22 Identities = 53/119 (44%), Positives = 78/119 (65%), Gaps = 0/119 (0%) Frame = -3 Query 653 RRAKKKLIKHFKKNRKEKNPSQLIS*M*NII*IPNGVTPPILDSKPKRQSRKRYDTVANR 474 + A++K F++ + + + +++ + + V + +SKPKR RK + Sbjct 212 KEAQEKADSEFEEADRAEEEASILASQELLALSNSDVIETVAESKPKRAPRKATLATETK 271 Query 473 AKSSKLVPGSMVRVVSGTFAEFLGSLEKLNRKTGKATVGFTLFGKESLVELDVKDIVLE 297 AK KL GS VRV+SGTFAEF+G+L+KLNRKT KATVGFTLFGKE+LVE+D+ ++V E Sbjct 272 AKKKKLAAGSTVRVLSGTFAEFVGNLKKLNRKTAKATVGFTLFGKETLVEIDINELVPE 330 Score = 25.4 bits (54), Expect(2) = 2e-22 Identities = 11/18 (61%), Positives = 12/18 (66%), Gaps = 0/18 (0%) Frame = -1 Query 697 PVSDDDMEAISNQPKEEQ 644 PV D D+EAI Q KE Q Sbjct 198 PVDDSDLEAIFKQAKEAQ 215 >gi|92876119|gb|ABE83852.1| NusG [Medicago truncatula] Length=329 Score = 85.5 bits (210), Expect(3) = 4e-19 Identities = 48/94 (51%), Positives = 66/94 (70%), Gaps = 6/94 (6%) Frame = -3 Query 557 IPNGVTPPILDSKPKRQSRKRYD--TVANRAKSSK----LVPGSMVRVVSGTFAEFLGSL 396 + + V+ I+DSKPKR SRK + T+ A S+K LV GS V+++SG+F F G+L Sbjct 235 LESDVSKAIVDSKPKRGSRKTSNQLTITEEASSAKKKPKLVTGSTVQIISGSFLGFAGTL 294 Query 395 EKLNRKTGKATVGFTLFGKESLVELDVKDIVLET 294 +KLN KT ATV FT+FGKE++V+LDV +IV ET Sbjct 295 KKLNSKTKMATVHFTMFGKENIVDLDVSEIVPET 328 Score = 27.3 bits (59), Expect(3) = 4e-19 Identities = 12/18 (66%), Positives = 14/18 (77%), Gaps = 0/18 (0%) Frame = -1 Query 697 PVSDDDMEAISNQPKEEQ 644 PV++DDMEAI Q K EQ Sbjct 193 PVAEDDMEAIFKQAKVEQ 210 Score = 21.9 bits (45), Expect(3) = 4e-19 Identities = 8/16 (50%), Positives = 13/16 (81%), Gaps = 0/16 (0%) Frame = -2 Query 654 KKSKEKADQAFQEEQE 607 K +E AD+AF+EE++ Sbjct 207 KVEQENADKAFEEEEK 222 >gi|115456311|ref|NP_001051756.1| Gene info Os03g0825500 [Oryza sativa (japonica cultivar-group)] gi|15042831|gb|AAK82454.1|AC091247_21 Gene info putative transcription factor [Oryza sativa] gi|108711839|gb|ABF99634.1| Gene info KOW motif family protein, expressed [Oryza sativa (japonica cultivar-group)] gi|108711840|gb|ABF99635.1| Gene info KOW motif family protein, expressed [Oryza sativa (japonica cultivar-group)] gi|113550227|dbj|BAF13670.1| Gene info Os03g0825500 [Oryza sativa (japonica cultivar-group)] Length=330 Score = 57.8 bits (138), Expect = 4e-08 Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 2/76 (2%) Frame = -3 Query 533 ILDSKPKRQSRKRYDTVANRAKSSKLVPGSMVRVVSGTFAEFLGSLEKLNRKTGKATVGF 354 +L +K KRQ +K + + PG+ V V+SG F F GSL ++NRK KAT+ Sbjct 252 MLMNKIKRQFKKPISK--GGSNHNAFTPGASVHVLSGPFEGFTGSLLEVNRKNKKATLQL 309 Query 353 TLFGKESLVELDVKDI 306 TLFGKES V+LD I Sbjct 310 TLFGKESFVDLDFDQI 325 >gi|115475319|ref|NP_001061256.1| Gene info Os08g0210500 [Oryza sativa (japonica cultivar-group)] gi|113623225|dbj|BAF23170.1| Gene info Os08g0210500 [Oryza sativa (japonica cultivar-group)] Length=85 Score = 30.4 bits (67), Expect = 6.8 Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 0/21 (0%) Frame = -2 Query 201 VYSPLYVDCGIEVITHAHHCL 139 +Y L+V+CG+EVIT HCL Sbjct 36 LYHILHVECGLEVITKPLHCL 56
  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 477
Number of extensions: 11
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 706
Length of database: 101054579
Length adjustment: 110
Effective length of query: 596
Effective length of database: 69886189
Effective search space: 8735773625
Effective search space used: 8735773625
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 66 (30.0 bits)