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BLASTX 2.2.15 [Oct-15-2006] 
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168928641-30655-147758262972.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs
Taxonomy reports

Query=  Contig78
Length=358

Distribution of 7 Blast Hits on the Query Sequence


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|479593|pir||S34829  triose phosphate/3-phosphoglycerate/pho...  32.0    0.67 
gi|231903|sp|P29463|TPT_SOLTU  Triose phosphate/phosphate tran...  32.0    0.67 
gi|110288772|gb|ABG65972.1|  retrotransposon protein, putative...  29.3    4.4  
gi|22857585|gb|AAN09859.1|  putative polyprotein [Oryza sativa (j  29.3    4.4   Gene info
gi|115485497|ref|NP_001067892.1|  Os11g0479000 [Oryza sativa (...  28.5    7.5   Gene info
gi|108708176|gb|ABF95971.1|  retrotransposon protein, putative...  28.1    9.7  
gi|6691123|gb|AAF24496.1|AF213695_1  FH protein NFH1 [Nicotiana t  28.1    9.7   UniGene info
Alignments

>gi|479593|pir||S34829  triose phosphate/3-phosphoglycerate/phosphate translocator - 
potato
Length=414

 Score = 32.0 bits (71),  Expect = 0.67
 Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = +2

Query  2    GFNLLVAIWVATTSVQTSIK*MQCAAAASLVSGIHTGSADIEDGDLAK-VLVIKFFFVAL  178
            G  L  AI + T+  + SIK   C+AAAS  +G    S D + G   K  L   FFF   
Sbjct  62   GRQLRPAILLETSPKRESIK--PCSAAASSSAGSSDSSGDAKVGFFNKATLTTGFFFFMW  119

Query  179  YFFN  190
            YF N
Sbjct  120  YFLN  123


>gi|231903|sp|P29463|TPT_SOLTU  Triose phosphate/phosphate translocator, chloroplast precursor 
(cTPT) (E29)
 gi|21587|emb|CAA47430.1| UniGene info triose phosphate translocator [Solanum tuberosum]
Length=414

 Score = 32.0 bits (71),  Expect = 0.67
 Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = +2

Query  2    GFNLLVAIWVATTSVQTSIK*MQCAAAASLVSGIHTGSADIEDGDLAK-VLVIKFFFVAL  178
            G  L  AI + T+  + SIK   C+AAAS  +G    S D + G   K  L   FFF   
Sbjct  62   GRQLRPAILLETSPKRESIK--PCSAAASSSAGSSDSSGDAKVGFFNKATLTTGFFFFMW  119

Query  179  YFFN  190
            YF N
Sbjct  120  YFLN  123


>gi|110288772|gb|ABG65972.1|  retrotransposon protein, putative, Ty3-gypsy subclass [Oryza 
sativa (japonica cultivar-group)]
Length=1315

 Score = 29.3 bits (64),  Expect = 4.4
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 0/40 (0%)
 Frame = -1

Query  289  KTNLSNKIEIETNNSLSPNFSHVPLLYRPNLRLVKEIQCD  170
            +T    K + ++ ++L    +H PLL  PN   + E++CD
Sbjct  823  QTITQGKTQEKSFDTLKDKLTHAPLLQLPNFAKIFELECD  862


>gi|22857585|gb|AAN09859.1| Gene info putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length=928

 Score = 29.3 bits (64),  Expect = 4.4
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 0/40 (0%)
 Frame = -1

Query  289  KTNLSNKIEIETNNSLSPNFSHVPLLYRPNLRLVKEIQCD  170
            +T    K + ++ ++L    +H PLL  PN   + E++CD
Sbjct  823  QTITQGKTQEKSFDTLKDKLTHAPLLQLPNFAKIFELECD  862


>gi|115485497|ref|NP_001067892.1| Gene info Os11g0479000 [Oryza sativa (japonica cultivar-group)]
 gi|77550826|gb|ABA93623.1| Gene info expressed protein [Oryza sativa (japonica cultivar-group)]
 gi|113645114|dbj|BAF28255.1| Gene info Os11g0479000 [Oryza sativa (japonica cultivar-group)]
Length=131

 Score = 28.5 bits (62),  Expect = 7.5
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query  8    NLLVAIWVATTSVQTSIK*MQCAAAASL-VSGIHTGSADIEDGDLAKVLVIK  160
            NLL+A+     SVQ +    +CAA++S+ V  I+TG A    GD    + +K
Sbjct  6    NLLIALLFIVVSVQGTNGADRCAASSSIDVQTINTGEAAAGGGDTVFEVQVK  57


>gi|108708176|gb|ABF95971.1|  retrotransposon protein, putative, Ty3-gypsy subclass [Oryza 
sativa (japonica cultivar-group)]
Length=612

 Score = 28.1 bits (61),  Expect = 9.7
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 0/34 (0%)
 Frame = -1

Query  271  KIEIETNNSLSPNFSHVPLLYRPNLRLVKEIQCD  170
            K + ++ ++L    +H PLL  PN     E++CD
Sbjct  375  KTQEKSFDTLKDKLTHTPLLQLPNFGKTSELECD  408


>gi|6691123|gb|AAF24496.1|AF213695_1 UniGene info FH protein NFH1 [Nicotiana tabacum]
Length=868

 Score = 28.1 bits (61),  Expect = 9.7
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 0/28 (0%)
 Frame = -1

Query  283  NLSNKIEIETNNSLSPNFSHVPLLYRPN  200
            N SN      NNS S N SH+P L RP+
Sbjct  157  NYSNANSNNGNNSSSGNRSHIPKLQRPS  184







  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 254
Number of extensions: 2
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 358
Length of database: 101054579
Length adjustment: 86
Effective length of query: 272
Effective length of database: 76686565
Effective search space: 2530656645
Effective search space used: 2530656645
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)