Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168928734-22447-50853065944.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig83 Length=575
Score E Sequences producing significant alignments: (Bits) Value gi|289920|gb|AAA18529.1| chlorophyll A/B binding protein 369 3e-102 gi|115792|sp|P27493|CB22_TOBAC Chlorophyll a-b binding protei... 349 4e-96 gi|3036945|dbj|BAA25390.1| light harvesting chlorophyll a/b-b... 347 2e-95 gi|102139745|gb|ABF69952.1| chlorophyll A-B binding protein (... 347 2e-95 gi|3036944|dbj|BAA25389.1| light harvesting chlorophyll a/b-b... 346 3e-95 gi|3036942|dbj|BAA25388.1| light harvesting chlorophyll a/b-b... 345 8e-95 gi|115805|sp|P27495|CB24_TOBAC Chlorophyll a-b binding protei... 345 8e-95 gi|3036946|dbj|BAA25391.1| light harvesting chlorophyll a/b-b... 345 8e-95 gi|115808|sp|P04783|CB25_PETSP Chlorophyll a-b binding protei... 344 1e-94 gi|693914|gb|AAA80589.1| chlorophyll a/b binding protein 343 2e-94 gi|693920|gb|AAA80593.1| chlorophyll a/b binding protein 343 2e-94 gi|115819|sp|P07370|CB2B_LYCES Chlorophyll a-b binding protei... 343 2e-94 gi|115810|sp|P27496|CB25_TOBAC Chlorophyll a-b binding protei... 343 2e-94 gi|693916|gb|AAA80591.1| chlorophyll a/b binding protein 342 4e-94 gi|224927|prf||1204205B protein 1B,chlorophyll binding 342 4e-94 gi|170404|gb|AAA34148.1| chlorophyll a/b-binding protein Cab-3C 342 5e-94 gi|115825|sp|P07369|CB2G_LYCES Chlorophyll a-b binding protei... 342 5e-94 gi|3036955|dbj|BAA25396.1| light harvesting chlorophyll a/b-b... 342 7e-94 gi|3036948|dbj|BAA25392.1| light harvesting chlorophyll a/b-b... 342 7e-94 gi|693922|gb|AAA80594.1| chlorophyll a/b binding protein 341 1e-93 gi|3036951|dbj|BAA25394.1| light harvesting chlorophyll a/b-b... 341 1e-93 gi|3036953|dbj|BAA25395.1| light harvesting chlorophyll a/b-b... 340 2e-93 gi|115812|sp|P27491|CB27_TOBAC Chlorophyll a-b binding protei... 340 2e-93 gi|2645999|gb|AAB87573.1| chlorophyll a/b binding protein of ... 340 3e-93 gi|693918|gb|AAA80592.1| chlorophyll a/b binding protein 339 4e-93 gi|6716783|gb|AAF26741.1|AF220527_1 chlorophyll a/b binding prot 339 5e-93 gi|87621681|gb|ABD38707.1| chloroplast chlorophyll a/b bindin... 338 6e-93 gi|102139977|gb|ABF70112.1| chlorophyll A-B binding protein (... 338 6e-93 gi|28630973|gb|AAO45885.1| chlorophyll a/b-binding protein precu 337 1e-92 gi|115780|sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protei... 337 1e-92 gi|9587205|gb|AAF89206.1|AF279249_1 LHCII type I chlorophyll a/b 337 2e-92 gi|81074613|gb|ABB55370.1| chlorophyll a-b binding protein 3C-li 337 2e-92 gi|115781|sp|P27492|CB21_TOBAC Chlorophyll a-b binding protei... 336 4e-92 gi|94404555|gb|ABF17940.1| putative chloroplast chlorophyll a... 335 5e-92 gi|506629|gb|AAA50172.1| photosystem II type I chlorophyll a/b-b 335 7e-92 gi|9587207|gb|AAF89207.1|AF279250_1 LHCII type I chlorophyll a/b 334 1e-91 gi|2804572|dbj|BAA24493.1| chlorophyll a/b-binding protein [Fagu 334 1e-91 gi|109389998|gb|ABG29728.1| chloroplast chlorophyll a/b binding 333 2e-91 gi|2196770|gb|AAB61236.1| chlorophyll a/b-binding protein [Mesem 333 3e-91 gi|115789|sp|P04780|CB22_PETSP Chlorophyll a-b binding protei... 332 4e-91 gi|115807|sp|P12470|CB25_NICPL Chlorophyll a-b binding protei... 332 4e-91 gi|217944|dbj|BAA03104.1| light-harvesting chlorophyll a/b-bi... 332 4e-91 gi|115800|sp|P09756|CB23_SOYBN Chlorophyll a-b binding protei... 332 6e-91 gi|14423661|sp|P92919|CB23_APIGR Chlorophyll a-b binding prot... 332 6e-91 gi|3036949|dbj|BAA25393.1| light harvesting chlorophyll a/b-b... 332 6e-91 gi|115795|sp|P12469|CB23_NICPL Chlorophyll a-b binding protei... 332 7e-91 gi|2196774|gb|AAB61238.1| chlorophyll a/b-binding protein [Mesem 331 1e-90 gi|2196772|gb|AAB61237.1| chlorophyll a/b-binding protein [Mesem 331 1e-90 gi|18266039|gb|AAL67432.1|AF458406_1 chlorophyll a/b binding pro 331 1e-90 gi|115778|sp|P13851|CB21_SINAL Chlorophyll a-b binding protei... 331 1e-90 gi|115798|sp|P04781|CB23_PETSP Chlorophyll a-b binding protei... 330 2e-90 gi|1053216|gb|AAA80688.1| chlorophyll a/b-binding protein 330 2e-90 gi|115804|sp|P04782|CB24_PETSP Chlorophyll a-b binding protei... 329 4e-90 gi|1657859|gb|AAB18209.1| chlorophyll a/b-binding protein WCA... 329 5e-90 gi|73665920|gb|AAZ79657.1| putative chlorophyll a/b-binding prot 328 8e-90 gi|115785|sp|P08963|CB22_HORVU Chlorophyll a-b binding protei... 328 8e-90 gi|15220615|ref|NP_174286.1| CAB1 (CHLOROPHYLL A/B BINDING PR... 328 8e-90 gi|115786|sp|P06671|CB22_MAIZE Chlorophyll a-b binding protei... 328 8e-90 gi|21419|emb|CAA78379.1| chlorophyll a/b-binding protein PS I... 328 8e-90 gi|8954293|gb|AAD27879.2|AF139467_1 LHCII type I chlorophyll a/b 328 1e-89 gi|92890755|gb|ABE90474.1| Chlorophyll A-B binding protein [Medi 327 2e-89 gi|31323256|gb|AAP44089.1| chlorophyll a/b binding protein [Bras 327 2e-89 gi|168296|gb|AAA33396.1| light-harvesting chlorophyll a/b protei 327 2e-89 gi|18397286|ref|NP_564339.1| CAB3 (CHLOROPHYLL A/B BINDING PR... 326 3e-89 gi|47026851|gb|AAT08651.1| chloroplast chlorophyll A-B bindin... 326 4e-89 gi|115768|sp|P08221|CB21_CUCSA Chlorophyll a-b binding protei... 325 7e-89 gi|115439621|ref|NP_001044090.1| Os01g0720500 [Oryza sativa (... 325 9e-89 gi|4512125|gb|AAD21625.1| putative chlorophyll a/b-binding pr... 324 1e-88 gi|115782|sp|P04784|CB21_WHEAT Chlorophyll a-b binding protei... 324 1e-88 gi|17473828|gb|AAL38341.1| chlorophyll a/b-binding protein [A... 324 2e-88 gi|556367|gb|AAA50310.1| light-harvesting chlorophyll a/b-bindin 324 2e-88 gi|115815|sp|P27497|CB29_MAIZE Chlorophyll a-b binding protei... 324 2e-88 gi|3928140|emb|CAA10284.1| chlorophyll a/b binding protein [Cice 324 2e-88 gi|115438250|ref|NP_001043493.1| Os01g0600900 [Oryza sativa (... 323 3e-88 gi|115774|sp|P04779|CB21_PETSP Chlorophyll a-b binding protei... 323 3e-88 gi|18403546|ref|NP_565786.1| LHB1B2; chlorophyll binding [Ara... 322 4e-88 gi|3293555|gb|AAC25775.1| chlorophyll a/b binding protein [Medic 320 2e-87 gi|18403549|ref|NP_565787.1| LHB1B1; chlorophyll binding [Ara... 320 2e-87 gi|1661160|gb|AAB18404.1| chlorophyll a/b binding protein [Oryza 320 2e-87 gi|21592428|gb|AAM64379.1| putative photosystem II type I chl... 319 5e-87 gi|974850|emb|CAA61432.1| LHCII type I protein [Hordeum vulgare 318 1e-86 gi|22230|emb|CAA37474.1| light harvesting chlorophyll a /b bindi 317 1e-86 gi|115478691|ref|NP_001062939.1| Os09g0346500 [Oryza sativa (... 317 2e-86 gi|115771|sp|P12329|CB21_MAIZE Chlorophyll a-b binding protei... 317 2e-86 gi|20182|emb|CAA32109.1| chlorophyll a/b-binding preprotein (... 317 2e-86 gi|38096045|gb|AAR10886.1| chlorophyll a/b binding protein [Trif 316 4e-86 gi|218172|dbj|BAA00536.1| type I light-harvesting chlorophyll... 316 4e-86 gi|56809379|gb|AAW31511.1| light-harvesting chlorophyll-a/b b... 314 1e-85 gi|62176932|emb|CAG25596.1| putative chlorophyll a/b binding ... 314 1e-85 gi|115788|sp|P07371|CB22_PEA Chlorophyll a-b binding protein ... 313 3e-85 gi|20178|emb|CAA32108.1| chlorophyll a/b-binding preprotein (... 312 5e-85 gi|47026888|gb|AAT08668.1| chloroplast chlorophyll A-B bindin... 310 3e-84 gi|53627222|gb|AAU89262.1| chloroplast light harvesting chlor... 308 9e-84 gi|67772801|gb|AAY81729.1| chloroplast putative light harvest... 308 9e-84 gi|115814|sp|P27490|CB28_PEA Chlorophyll a-b binding protein ... 308 9e-84 gi|53627226|gb|AAU89264.1| chloroplast light harvesting chlor... 307 1e-83 gi|53627220|gb|AAU89261.1| chloroplast light harvesting chlor... 307 2e-83 gi|53627224|gb|AAU89263.1| chloroplast light harvesting chlor... 307 2e-83 gi|53627208|gb|AAU89255.1| chloroplast light harvesting chlor... 306 3e-83 gi|53627206|gb|AAU89254.1| chloroplast light harvesting chlor... 306 3e-83
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 466 Number of extensions: 7 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 575 Length of database: 101054579 Length adjustment: 107 Effective length of query: 468 Effective length of database: 70736236 Effective search space: 5941843824 Effective search space used: 5941843824 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)