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BLASTX 2.2.15 [Oct-15-2006] 
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168929001-10980-1516909977.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs
Taxonomy reports

Query=  Contig96
Length=690

Distribution of 27 Blast Hits on the Query Sequence


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|115474617|ref|NP_001060905.1|  Os08g0127700 [Oryza sativa (...   325    1e-88 Gene info
gi|27754341|gb|AAO22622.1|  putative step II splicing factor [Ara   323    5e-88 UniGene info
gi|18408333|ref|NP_564859.1|  SMP1; nucleic acid binding [Arabido   321    1e-87 UniGene infoGene info
gi|6686410|gb|AAF23844.1|AC007234_16  F1E22.4 [Arabidopsis thalia   313    4e-85
gi|18419978|ref|NP_568017.1|  SMP2 [Arabidopsis thaliana] >gi|...   292    9e-79 UniGene infoGene info
gi|4006865|emb|CAB16783.1|  putative protein [Arabidopsis thal...   284    2e-76
gi|2190551|gb|AAB60915.1|  Similar to C. elegans hypothetical ...   283    6e-76
gi|15231289|ref|NP_190181.1|  unknown protein [Arabidopsis tha...   262    1e-69 UniGene infoGene info
gi|116054771|emb|CAL56848.1|  RNA splicing factor-Slu7p (ISS) [Os   160    3e-39
gi|115450375|ref|NP_001048788.1|  Os03g0120400 [Oryza sativa (...  32.7    1.3   Gene info
gi|115462987|ref|NP_001055093.1|  Os05g0283600 [Oryza sativa (...  32.3    1.7   Gene info
gi|115457436|ref|NP_001052318.1|  Os04g0252300 [Oryza sativa (...  32.3    1.7   Gene info
gi|38345988|emb|CAD39978.2|  OSJNBa0032B23.6 [Oryza sativa (japon  32.3    1.7   Gene info
gi|38346981|emb|CAD40289.2|  OSJNBb0062H02.6 [Oryza sativa (japon  32.3    1.7   Gene info
gi|110738286|dbj|BAF01072.1|  hypothetical protein [Arabidopsis t  31.6    3.0  
gi|4388829|gb|AAD19784.1|  putative retroelement pol polyprotein   31.6    3.0  
gi|18087608|gb|AAL58934.1|AF462847_1  AT3g51050/F24M12_90 [Ara...  31.2    3.9   UniGene info
gi|77549416|gb|ABA92213.1|  retrotransposon protein, putative,...  31.2    3.9  
gi|22331734|ref|NP_190674.2|  unknown protein [Arabidopsis thalia  31.2    3.9   UniGene infoGene info
gi|115442027|ref|NP_001045293.1|  Os01g0931000 [Oryza sativa (...  30.8    5.0   Gene info
gi|62732947|gb|AAX95066.1|  retrotransposon protein, putative,...  30.8    5.0  
gi|115481236|ref|NP_001064211.1|  Os10g0162200 [Oryza sativa (...  30.8    5.0   Gene info
gi|6562257|emb|CAB62627.1|  putative protein [Arabidopsis thalian  30.4    6.6  
gi|37957103|gb|AAP02909.1|  ORFIII-like polyprotein [Musa x parad  30.4    6.6  
gi|115485519|ref|NP_001067903.1|  Os11g0482400 [Oryza sativa (...  30.4    6.6   Gene info
gi|116311092|emb|CAH68021.1|  H0807C06-H0308C08.8 [Oryza sativa (  30.0    8.6  
gi|94502688|ref|YP_588399.1|  hypothetical protein ZeamMp152 [...  30.0    8.6   Gene info
Alignments

>gi|115474617|ref|NP_001060905.1| Gene info Os08g0127700 [Oryza sativa (japonica cultivar-group)]
 gi|42407714|dbj|BAD08862.1| Gene info putative step II splicing factor SLU7 [Oryza sativa (japonica 
cultivar-group)]
 gi|113622874|dbj|BAF22819.1| Gene info Os08g0127700 [Oryza sativa (japonica cultivar-group)]
Length=536

 Score =  325 bits (832),  Expect = 1e-88
 Identities = 148/169 (87%), Positives = 161/169 (95%), Gaps = 0/169 (0%)
 Frame = +1

Query  121  MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP  300
            MATASV+FKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNA++P
Sbjct  1    MATASVSFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNADKP  60

Query  301  SLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACENCGAMTHDSKACMERPRKKGAKW  480
            SLKHQR WKSDPNYTKSWYDRGAK+FQA+KYRKGACENCGAMTHD K+CMERPR  GAKW
Sbjct  61   SLKHQRNWKSDPNYTKSWYDRGAKLFQANKYRKGACENCGAMTHDKKSCMERPRSVGAKW  120

Query  481  TSMHIAPDEKIETFELDYDGKRDRWNGYDASTYARVIERYEARDEARRK  627
            T+++IAPDEK+E+FELDYDGKRDRWNGYD STY RVI  YEAR+EAR+K
Sbjct  121  TNINIAPDEKVESFELDYDGKRDRWNGYDPSTYTRVIADYEAREEARKK  169


>gi|27754341|gb|AAO22622.1| UniGene info putative step II splicing factor [Arabidopsis thaliana]
Length=535

 Score =  323 bits (827),  Expect = 5e-88
 Identities = 148/169 (87%), Positives = 164/169 (97%), Gaps = 0/169 (0%)
 Frame = +1

Query  121  MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP  300
            MATASVAFKSREDHRKQ+ELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLN+E+P
Sbjct  1    MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSEKP  60

Query  301  SLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACENCGAMTHDSKACMERPRKKGAKW  480
            SLKHQRKWKSDPNYTKSWYDRGAKIFQA+KYRKGAC+NCGAMTH +KACM+RPRK GAK+
Sbjct  61   SLKHQRKWKSDPNYTKSWYDRGAKIFQAEKYRKGACQNCGAMTHTAKACMDRPRKIGAKY  120

Query  481  TSMHIAPDEKIETFELDYDGKRDRWNGYDASTYARVIERYEARDEARRK  627
            T+M+IAPDEKIE+FELDYDGKRDRWNGYD STY RVI+ YEA+++AR+K
Sbjct  121  TNMNIAPDEKIESFELDYDGKRDRWNGYDPSTYHRVIDLYEAKEDARKK  169


>gi|18408333|ref|NP_564859.1| UniGene infoGene info SMP1; nucleic acid binding [Arabidopsis thaliana]
Length=535

 Score =  321 bits (823),  Expect = 1e-87
 Identities = 147/169 (86%), Positives = 163/169 (96%), Gaps = 0/169 (0%)
 Frame = +1

Query  121  MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP  300
            MATASVAFKSREDHRKQ+ELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLN+E+P
Sbjct  1    MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSEKP  60

Query  301  SLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACENCGAMTHDSKACMERPRKKGAKW  480
            SLKHQRKWKSDPNYTKSWYDRGAKIFQA+KYRKGAC+NCG MTH +KACM+RPRK GAK+
Sbjct  61   SLKHQRKWKSDPNYTKSWYDRGAKIFQAEKYRKGACQNCGTMTHTAKACMDRPRKIGAKY  120

Query  481  TSMHIAPDEKIETFELDYDGKRDRWNGYDASTYARVIERYEARDEARRK  627
            T+M+IAPDEKIE+FELDYDGKRDRWNGYD STY RVI+ YEA+++AR+K
Sbjct  121  TNMNIAPDEKIESFELDYDGKRDRWNGYDPSTYHRVIDLYEAKEDARKK  169


>gi|6686410|gb|AAF23844.1|AC007234_16  F1E22.4 [Arabidopsis thaliana]
Length=537

 Score =  313 bits (802),  Expect = 4e-85
 Identities = 142/165 (86%), Positives = 159/165 (96%), Gaps = 0/165 (0%)
 Frame = +1

Query  133  SVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERPSLKH  312
            +VAFKSREDHRKQ+ELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLN+E+PSLKH
Sbjct  7    AVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSEKPSLKH  66

Query  313  QRKWKSDPNYTKSWYDRGAKIFQADKYRKGACENCGAMTHDSKACMERPRKKGAKWTSMH  492
            QRKWKSDPNYTKSWYDRGAKIFQA+KYRKGAC+NCG MTH +KACM+RPRK GAK+T+M+
Sbjct  67   QRKWKSDPNYTKSWYDRGAKIFQAEKYRKGACQNCGTMTHTAKACMDRPRKIGAKYTNMN  126

Query  493  IAPDEKIETFELDYDGKRDRWNGYDASTYARVIERYEARDEARRK  627
            IAPDEKIE+FELDYDGKRDRWNGYD STY RVI+ YEA+++AR+K
Sbjct  127  IAPDEKIESFELDYDGKRDRWNGYDPSTYHRVIDLYEAKEDARKK  171


>gi|18419978|ref|NP_568017.1| UniGene infoGene info SMP2 [Arabidopsis thaliana]
 gi|15912281|gb|AAL08274.1| UniGene infoGene info AT4g37120/C7A10_240 [Arabidopsis thaliana]
Length=536

 Score =  292 bits (747),  Expect = 9e-79
 Identities = 133/169 (78%), Positives = 153/169 (90%), Gaps = 0/169 (0%)
 Frame = +1

Query  121  MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP  300
            MATASVAFKSREDHRK+LELEEARKAGLAPAEVDEDGKEINPHIP+YMS APWYL +E+P
Sbjct  1    MATASVAFKSREDHRKKLELEEARKAGLAPAEVDEDGKEINPHIPEYMSKAPWYLKSEQP  60

Query  301  SLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACENCGAMTHDSKACMERPRKKGAKW  480
            SLKHQ+ WK +P   K WYDRG KI+QA++YRKGAC NCGAMTH SKACM+RPRK GAK+
Sbjct  61   SLKHQKNWKIEPEPKKIWYDRGKKIYQAEQYRKGACINCGAMTHSSKACMDRPRKIGAKY  120

Query  481  TSMHIAPDEKIETFELDYDGKRDRWNGYDASTYARVIERYEARDEARRK  627
            T+M+IA DEKIE+FELDYDGKRDRWNGYD STY  V++RY+A++EAR+K
Sbjct  121  TNMNIAADEKIESFELDYDGKRDRWNGYDTSTYRHVVDRYDAKEEARKK  169


>gi|4006865|emb|CAB16783.1|  putative protein [Arabidopsis thaliana]
 gi|7270661|emb|CAB80378.1|  step II splicing factor-like protein [Arabidopsis thaliana]
Length=538

 Score =  284 bits (727),  Expect = 2e-76
 Identities = 128/166 (77%), Positives = 150/166 (90%), Gaps = 0/166 (0%)
 Frame = +1

Query  130  ASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERPSLK  309
            ++VAFKSREDHRK+LELEEARKAGLAPAEVDEDGKEINPHIP+YMS APWYL +E+PSLK
Sbjct  6    SAVAFKSREDHRKKLELEEARKAGLAPAEVDEDGKEINPHIPEYMSKAPWYLKSEQPSLK  65

Query  310  HQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACENCGAMTHDSKACMERPRKKGAKWTSM  489
            HQ+ WK +P   K WYDRG KI+QA++YRKGAC NCGAMTH SKACM+RPRK GAK+T+M
Sbjct  66   HQKNWKIEPEPKKIWYDRGKKIYQAEQYRKGACINCGAMTHSSKACMDRPRKIGAKYTNM  125

Query  490  HIAPDEKIETFELDYDGKRDRWNGYDASTYARVIERYEARDEARRK  627
            +IA DEKIE+FELDYDGKRDRWNGYD STY  V++RY+A++EAR+K
Sbjct  126  NIAADEKIESFELDYDGKRDRWNGYDTSTYRHVVDRYDAKEEARKK  171


>gi|2190551|gb|AAB60915.1|  Similar to C. elegans hypothetical protein K07C5.6 (gb|Z71181). 
ESTs gb|H36844,gb|AA394956 come from this gene. [Arabidopsis 
thaliana]
Length=489

 Score =  283 bits (723),  Expect = 6e-76
 Identities = 128/142 (90%), Positives = 140/142 (98%), Gaps = 0/142 (0%)
 Frame = +1

Query  133  SVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERPSLKH  312
            +VAFKSREDHRKQ+ELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLN+E+PSLKH
Sbjct  7    AVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSEKPSLKH  66

Query  313  QRKWKSDPNYTKSWYDRGAKIFQADKYRKGACENCGAMTHDSKACMERPRKKGAKWTSMH  492
            QRKWKSDPNYTKSWYDRGAKIFQA+KYRKGAC+NCGAMTH +KACM+RPRK GAK+T+M+
Sbjct  67   QRKWKSDPNYTKSWYDRGAKIFQAEKYRKGACQNCGAMTHTAKACMDRPRKIGAKYTNMN  126

Query  493  IAPDEKIETFELDYDGKRDRWN  558
            IAPDEKIE+FELDYDGKRDRWN
Sbjct  127  IAPDEKIESFELDYDGKRDRWN  148


>gi|15231289|ref|NP_190181.1| UniGene infoGene info unknown protein [Arabidopsis thaliana]
 gi|7339496|emb|CAB82819.1| Gene info putative protein [Arabidopsis thaliana]
Length=385

 Score =  262 bits (669),  Expect = 1e-69
 Identities = 122/169 (72%), Positives = 142/169 (84%), Gaps = 0/169 (0%)
 Frame = +1

Query  121  MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP  300
            MATASVAFKSR+DHRKQ ELEEARKAGLAPAEVDE GKEIN HIP+Y++  P Y  +E+P
Sbjct  1    MATASVAFKSRKDHRKQKELEEARKAGLAPAEVDEGGKEINLHIPKYLTIPPLYAKSEKP  60

Query  301  SLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACENCGAMTHDSKACMERPRKKGAKW  480
            SLKHQ+ WK+ P  T S+YDRGAK +QA+KYRKGAC+NCGAMTHD K CMERPRK GAK+
Sbjct  61   SLKHQKNWKTKPVSTTSYYDRGAKTYQAEKYRKGACQNCGAMTHDVKTCMERPRKVGAKY  120

Query  481  TSMHIAPDEKIETFELDYDGKRDRWNGYDASTYARVIERYEARDEARRK  627
            T  +IAPDEKIE+ E DYDGKRDRWNGYD S+Y  V +R+EA++ AR K
Sbjct  121  TDKNIAPDEKIESLEFDYDGKRDRWNGYDPSSYCHVRDRHEAKENAREK  169


>gi|116054771|emb|CAL56848.1|  RNA splicing factor-Slu7p (ISS) [Ostreococcus tauri]
Length=503

 Score =  160 bits (406),  Expect = 3e-39
 Identities = 73/141 (51%), Positives = 98/141 (69%), Gaps = 2/141 (1%)
 Frame = +1

Query  178  LEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQRKWKSDPNYTKSWY  357
            +   R AGL P E+D DG  +NPHIP++M++APWYLN + P LKHQ+  + +   T +WY
Sbjct  12   IRHERAAGLIPPEIDADGNAVNPHIPRFMAAAPWYLNQDGPGLKHQKAPEKEQEST-NWY  70

Query  358  DRGAKIFQADKYRKGACENCGAMTHDSKACMERPRKKGAKWTSMHIAPDEKIE-TFELDY  534
             RG    +A  +R+GACENCGAMTH  K CMERPR KGA  T   IAPDE ++   +L +
Sbjct  71   KRGVSSNRATTFRRGACENCGAMTHKKKDCMERPRAKGASKTQKDIAPDEYVQPELKLGF  130

Query  535  DGKRDRWNGYDASTYARVIER  597
            + KRDR+NG+D + YA+V+ER
Sbjct  131  ESKRDRYNGFDVNDYAKVVER  151


>gi|115450375|ref|NP_001048788.1| Gene info Os03g0120400 [Oryza sativa (japonica cultivar-group)]
 gi|21426116|gb|AAM52313.1|AC105363_2 Gene info Unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|27452914|gb|AAO15298.1| Gene info Hypothetical protein [Oryza sativa (japonica cultivar-group)]
 gi|108705899|gb|ABF93694.1| Gene info copper chaperone, putative, expressed [Oryza sativa (japonica 
cultivar-group)]
 gi|113547259|dbj|BAF10702.1| Gene info Os03g0120400 [Oryza sativa (japonica cultivar-group)]
Length=193

 Score = 32.7 bits (73),  Expect = 1.3
 Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
 Frame = +1

Query  4    SFFFD*GLLSARSTRVFRLNL*NFILKITNFCSAFLDSTMATASVAFKSREDHRKQLELE  183
            +++++ GL   R  R   L+L    LK+   CS   +  +  A +  +  +    +LE+E
Sbjct  42   TYYYEGGLAGRRMGRSRPLSLQTVELKVRMCCSG-CERVVKHALMKLRGVDSVEVELEME  100

Query  184  EARKAGLAPA-----EVDEDGKEI----NPHIPQYMSSAPWYLNAE---RPSLKHQR  318
            +    G         EV   GK+     NP +P Y +SA  Y + E   RPS  + R
Sbjct  101  KVTVTGYVERQRVLKEVRRAGKKAEFWPNPDLPLYFTSAKDYFHDEESFRPSYNYYR  157


>gi|115462987|ref|NP_001055093.1| Gene info Os05g0283600 [Oryza sativa (japonica cultivar-group)]
 gi|113578644|dbj|BAF17007.1| Gene info Os05g0283600 [Oryza sativa (japonica cultivar-group)]
Length=189

 Score = 32.3 bits (72),  Expect = 1.7
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = +1

Query  394  RKGACENCGAMTHDSKACMERPRKKGAKWTSMHIAPDEKIETFEL  528
            +K  C NCG + H +K C  +P+++ A     H+A +E   T  L
Sbjct  98   KKDKCRNCGKLGHWAKYCRSKPKQEQA-----HVAQEEDEPTLML  137


>gi|115457436|ref|NP_001052318.1| Gene info Os04g0252300 [Oryza sativa (japonica cultivar-group)]
 gi|113563889|dbj|BAF14232.1| Gene info Os04g0252300 [Oryza sativa (japonica cultivar-group)]
Length=536

 Score = 32.3 bits (72),  Expect = 1.7
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = +1

Query  394  RKGACENCGAMTHDSKACMERPRKKGAKWTSMHIAPDEK  510
            R   C NCG ++H +K C  +P+ +       H+A D+K
Sbjct  69   RDDKCRNCGKLSHWAKECRSKPKHE----DQAHVAQDDK  103


>gi|38345988|emb|CAD39978.2| Gene info OSJNBa0032B23.6 [Oryza sativa (japonica cultivar-group)]
Length=1149

 Score = 32.3 bits (72),  Expect = 1.7
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = +1

Query  394  RKGACENCGAMTHDSKACMERPRKKGAKWTSMHIAPDEK  510
            R   C NCG ++H +K C  +P+ +       H+A D+K
Sbjct  268  RDDKCRNCGKLSHWAKECRSKPKHE----DQAHVAQDDK  302


>gi|38346981|emb|CAD40289.2| Gene info OSJNBb0062H02.6 [Oryza sativa (japonica cultivar-group)]
Length=2001

 Score = 32.3 bits (72),  Expect = 1.7
 Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 24/127 (18%)
 Frame = +1

Query  232   KEINPHIPQYMSSAPWYLNAERPSLKHQRKWKSDPN-YTKSWYDRGAKIFQADKYRKGAC  408
             K  +PH+P   + A W      P  K  +  K  P+ +++S   RG++          +C
Sbjct  1829  KLFSPHLPTPEAMAKW----SAPMQKSSKALKPRPSIFSRSMAIRGSR----------SC  1874

Query  409   ENCGAMTHDSKACMERPRKKGAKWTSMHIAPDEKIETFELDYDGKRDRWNGYDASTYARV  588
             + C   T   +A  E+P K+ +  ++     D       LDY  +R R     A+ Y + 
Sbjct  1875  QRCSGQTEPHQA--EQPGKRLSSSSTAQKRDD-------LDYLEERRRRAALRAARYQQS  1925

Query  589   IERYEAR  609
             + RY  R
Sbjct  1926  LRRYHQR  1932


>gi|110738286|dbj|BAF01072.1|  hypothetical protein [Arabidopsis thaliana]
Length=224

 Score = 31.6 bits (70),  Expect = 3.0
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
 Frame = +1

Query  286  NAERPSLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACENCGAMTHDSKACM  450
            N E P L+ QR ++ + N       R  ++       +G CE CG +THDS AC+
Sbjct  133  NIEDP-LRFQRNFQFEANVNTLLRFRFERL-------RGFCEVCGMLTHDSGACL  179


>gi|4388829|gb|AAD19784.1|  putative retroelement pol polyprotein [Arabidopsis thaliana]
Length=1501

 Score = 31.6 bits (70),  Expect = 3.0
 Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 22/144 (15%)
 Frame = +1

Query  76   ILKITNFCSAFLDSTMATASVAFKSRED--HRKQLELEEARKAGLAPAEVD---------  222
            I K    C+  L    AT+    +  E+  H+  L L+E+R  GL    ++         
Sbjct  172  IYKPVTVCTCGLCRCGATSEPTKEREEEKIHQFVLGLDESRFGGLCATLINMDPLPSLGE  231

Query  223  -------EDGKEINPHIPQYMSSAPWYLNAERPSLKHQRKWKSDPNYTKSWYDRGAKIFQ  381
                   E+ +  + H+ +    A  +L A R  L H  +   D + ++S +  G++   
Sbjct  232  IYSRVIREEQRLASVHVREQKEEAVGFL-ARREQLDHHSR--VDASSSRSEHTGGSRSNS  288

Query  382  ADKYRKGACENCGAMTHDSKACME  453
              K R   C NCG   H+ K C +
Sbjct  289  IIKGRV-TCSNCGRTGHEKKECWQ  311


>gi|18087608|gb|AAL58934.1|AF462847_1 UniGene info AT3g51050/F24M12_90 [Arabidopsis thaliana]
 gi|24797020|gb|AAN64522.1| UniGene info At3g51050/F24M12_90 [Arabidopsis thaliana]
Length=698

 Score = 31.2 bits (69),  Expect = 3.9
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
 Frame = +1

Query  97   CSAFLDSTMATASVAFKSRED-----------HRKQLELEEARKAGLAPAEVDED----G  231
            C  F +S ++     +  RED            RK L+ +   K+   P    E+    G
Sbjct  292  CREFRESILSVMPHRWDRREDTLLKLAHFRRHKRKTLKKQAGSKSTAYPFHKPEEHTPAG  351

Query  232  KEINPHIPQYMSSAPWYLNAERPSLKHQRKWKSDPNYTKSWY  357
            K+++  IP+ +  A  Y  + +P  K  +   +  NYTK W+
Sbjct  352  KDLSRKIPKLIGKAARYAGSAKPK-KGMQYIPTITNYTKLWW  392


>gi|77549416|gb|ABA92213.1|  retrotransposon protein, putative, Ty1-copia subclass [Oryza 
sativa (japonica cultivar-group)]
Length=454

 Score = 31.2 bits (69),  Expect = 3.9
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +1

Query  391  YRKGACENCGAMTHDSKACMERPRKKGAKWTSMHIAPDE  507
            +R   C NCG + H +K C  +P+ +       H+A DE
Sbjct  102  HRDDKCRNCGKLGHWAKECRSKPKHE----DQAHVAQDE  136


>gi|22331734|ref|NP_190674.2| UniGene infoGene info unknown protein [Arabidopsis thaliana]
Length=698

 Score = 31.2 bits (69),  Expect = 3.9
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
 Frame = +1

Query  97   CSAFLDSTMATASVAFKSRED-----------HRKQLELEEARKAGLAPAEVDED----G  231
            C  F +S ++     +  RED            RK L+ +   K+   P    E+    G
Sbjct  292  CREFRESILSVMPHRWDRREDTLLKLAHFRRHKRKTLKKQAGSKSTAYPFHKPEEHTPAG  351

Query  232  KEINPHIPQYMSSAPWYLNAERPSLKHQRKWKSDPNYTKSWY  357
            K+++  IP+ +  A  Y  + +P  K  +   +  NYTK W+
Sbjct  352  KDLSRKIPKLIGKAARYAGSAKPK-KGMQYIPTITNYTKLWW  392


>gi|115442027|ref|NP_001045293.1| Gene info Os01g0931000 [Oryza sativa (japonica cultivar-group)]
 gi|113534824|dbj|BAF07207.1| Gene info Os01g0931000 [Oryza sativa (japonica cultivar-group)]
Length=1561

 Score = 30.8 bits (68),  Expect = 5.0
 Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 18/114 (15%)
 Frame = +1

Query  166  KQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQRKWKSDPNYT  345
            + +E  + RK   A + VD +G+ +        +   W     + +        S  N  
Sbjct  380  RSVEQRKQRKTAAASSRVDANGRLL-------FTEEEWLAKFRKAASLQDAAHSSGGNGD  432

Query  346  KSWYDRGAKIFQADKYRK-----------GACENCGAMTHDSKACMERPRKKGA  474
            +    RG K   A K  +           G C+NCG   H +K C  +P+ + A
Sbjct  433  RRGRGRGKKDDGAPKEAQPKPANPGGRNLGNCKNCGKRGHWAKDCRSKPKAQQA  486


>gi|62732947|gb|AAX95066.1|  retrotransposon protein, putative, unclassified [Oryza sativa 
(japonica cultivar-group)]
 gi|77548827|gb|ABA91624.1|  retrotransposon protein, putative, unclassified [Oryza sativa 
(japonica cultivar-group)]
Length=1385

 Score = 30.8 bits (68),  Expect = 5.0
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
 Frame = +1

Query  406  CENCGAMTHDSKACMERPRKKGAKWTSMHIAPDEKIETFEL  528
            C NCG + H +K C  +P+++ A     H+  DE   T  L
Sbjct  274  CRNCGKLGHCAKDCRSKPKQEQA-----HVVQDEDEPTLML  309


>gi|115481236|ref|NP_001064211.1| Gene info Os10g0162200 [Oryza sativa (japonica cultivar-group)]
 gi|18652506|gb|AAL77140.1|AC097447_6 Gene info Putative pol polyprotein [Oryza sativa (japonica cultivar-group)]
 gi|31430314|gb|AAP52245.1| Gene info retrotransposon protein, putative, Ty1-copia subclass [Oryza 
sativa (japonica cultivar-group)]
 gi|113638820|dbj|BAF26125.1| Gene info Os10g0162200 [Oryza sativa (japonica cultivar-group)]
Length=1283

 Score = 30.8 bits (68),  Expect = 5.0
 Identities = 26/133 (19%), Positives = 49/133 (36%), Gaps = 18/133 (13%)
 Frame = +1

Query  109  LDSTMATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLN  288
            +++ +    V+ +      + +E  + RK   A ++VD +G+ +        +   W   
Sbjct  294  IETLLDVNEVSLEEVTGRLRSVEQRKQRKTAAASSQVDANGRLL-------FTEEEWLAK  346

Query  289  AERPSLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRK-----------GACENCGAMTHD  435
              + +        S  N       RG K   A K  +           G C+NCG   H 
Sbjct  347  FRKAASLQDAAHSSGGNGDHRGRGRGKKDGGAPKEAQPKPANPGGRNPGNCKNCGKRGHW  406

Query  436  SKACMERPRKKGA  474
            +K C  +P+ + A
Sbjct  407  AKDCRSKPKAQQA  419


>gi|6562257|emb|CAB62627.1|  putative protein [Arabidopsis thaliana]
Length=680

 Score = 30.4 bits (67),  Expect = 6.6
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
 Frame = +1

Query  151  REDHRKQLELEEARKAGLAPAEVDED----GKEINPHIPQYMSSAPWYLNAERPSLKHQR  318
            R   RK L+ +   K+   P    E+    GK+++  IP+ +  A  Y  + +P  K  +
Sbjct  303  RRHKRKTLKKQAGSKSTAYPFHKPEEHTPAGKDLSRKIPKLIGKAARYAGSAKPK-KGMQ  361

Query  319  KWKSDPNYTKSWY  357
               +  NYTK W+
Sbjct  362  YIPTITNYTKLWW  374


>gi|37957103|gb|AAP02909.1|  ORFIII-like polyprotein [Musa x paradisiaca]
Length=181

 Score = 30.4 bits (67),  Expect = 6.6
 Identities = 31/175 (17%), Positives = 69/175 (39%), Gaps = 18/175 (10%)
 Frame = +1

Query  49   VFRLNL*NFILKITNFCSAFLDSTMATASVAFKSREDHRKQLELEEARKAGLAPAEVDED  228
            +F+  + N      +F + ++D  +  +    + +E  +K + + E     L+P ++   
Sbjct  7    IFQRKMDNCFRGTEDFIAVYIDDILVFSETIHQHKEHLKKFMTICEKNGLVLSPTKMKIG  66

Query  229  GKEIN--------------PHIPQYMSSAPWYLNAERPSLKHQRKWKSDPNYTKSWYDRG  366
             ++I+              PHI + +       + E   +K  RKW    NY +S+  + 
Sbjct  67   TRQIDFLGATIGNSKIKLQPHIIKKIIEMK---DEELKEVKGLRKWLGILNYARSYIPKL  123

Query  367  AKIFQADKYRKGACENCGAMTHDSKACMERPRKKGAKWTSMHIAPDEKIETFELD  531
             KI     Y K +      M+   +  ++  ++  A    + + P++ I   E D
Sbjct  124  GKIL-GPLYAKTSPNGERRMSTQDRKIVKEVKEVVANLPELELPPEKAIMIIETD  177


>gi|115485519|ref|NP_001067903.1| Gene info Os11g0482400 [Oryza sativa (japonica cultivar-group)]
 gi|77550880|gb|ABA93677.1| Gene info PPR986-12, putative, expressed [Oryza sativa (japonica cultivar-group)]
 gi|113645125|dbj|BAF28266.1| Gene info Os11g0482400 [Oryza sativa (japonica cultivar-group)]
Length=770

 Score = 30.4 bits (67),  Expect = 6.6
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
 Frame = +1

Query  415  CGAMTHDSKACMERPRKKGAKWTSM------HIAPDEKIETFE  525
            CG +   +KA +E P +    WTSM      H  P E I+ FE
Sbjct  441  CGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFE  483


>gi|116311092|emb|CAH68021.1|  H0807C06-H0308C08.8 [Oryza sativa (indica cultivar-group)]
Length=859

 Score = 30.0 bits (66),  Expect = 8.6
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
 Frame = +1

Query  400  GACENCGAMTHDSKACMERPRKKGAKWTSMHIAPDEKIE  516
            G C+NCG   H +K C  +P+ + A     H+A +E  E
Sbjct  365  GNCKNCGKRGHWAKDCRSKPKAQQA-----HVAQEEDNE  398


>gi|94502688|ref|YP_588399.1| Gene info hypothetical protein ZeamMp152 [Zea mays subsp. mays]
 gi|40795127|gb|AAR91171.1| Gene info hypothetical protein [Zea mays]
Length=102

 Score = 30.0 bits (66),  Expect = 8.6
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
 Frame = +1

Query  298  PSLKHQRKWKSDPNYTKSW--YDRGAKIFQADKYRK-GACENCGAMTHDSKACMERPRKK  468
            PS    ++     NY K W  Y +G +  ++  YRK G C NCG + H ++ C  +P  K
Sbjct  34   PSANPAKQNSGVVNYEKVWCRYCQG-RHHESTCYRKNGTCYNCGGLGHFAREC-PKPNSK  91







  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 431
Number of extensions: 2
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 690
Length of database: 101054579
Length adjustment: 109
Effective length of query: 581
Effective length of database: 70169538
Effective search space: 8490514098
Effective search space used: 8490514098
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 66 (30.0 bits)