RID=1168924684-24033-70351286661.BLASTQ1, Contig1

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168924684-24033-70351286661.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

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Score E Sequences producing significant alignments: (Bits) Value gi|11120801|gb|AAG30981.1|AC012396_17 unknown protein [Arabidops 29.6 3.3 gi|116058199|emb|CAL53388.1| unnamed protein product [Ostreococc 28.5 7.4 gi|86279632|gb|ABC94471.1| type 1 diacylglycerol acyltransfer... 28.5 7.4 gi|15230886|ref|NP_188589.1| cationic amino acid transporter ... 28.1 9.6

Alignments

 

>gi|11120801|gb|AAG30981.1|AC012396_17  unknown protein [Arabidopsis thaliana]
Length=745

 Score = 29.6 bits (65),  Expect = 3.3
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = -1

Query  247  KTTPEEKYYAYSESIRESANNCYNKGKQAVTNYNMQITDHIMDIRTS*QMQHQ  89
            K+  EEKY  Y  ++ E    C N   QA      Q  D  +D+    Q+QHQ
Sbjct  106  KSETEEKYRHYVSTLTERIQTCDNILHQA----GFQQVDETLDLFNELQLQHQ  154


>gi|116058199|emb|CAL53388.1|  unnamed protein product [Ostreococcus tauri]
Length=894

 Score = 28.5 bits (62),  Expect = 7.4
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 15/83 (18%)
 Frame = -2

Query  276  FISLNDA*SQRQHLKRSITLIQ-------------NPSASLLTTATTKGNKQLPITTCKS  136
            F SL DA S+     RS+T  Q             NP+ +  ++ T     + P+T  KS
Sbjct  219  FSSLRDAASRLARANRSVTRTQTRTCTSPTVEQRANPNLNQTSSVTESATARAPLTPTKS  278

Query  135  LIT*WTL--ELRNKCSTRIDGKD  73
            L+   ++  E+R   S+  DG++
Sbjct  279  LLEALSMSREIRGVGSSLDDGEE  301


>gi|86279632|gb|ABC94471.1|  type 1 diacylglycerol acyltransferase [Vernicia fordii]
 gi|86279634|gb|ABC94472.1|  type 1 diacylglycerol acyltransferase [Vernicia fordii]
Length=526

 Score = 28.5 bits (62),  Expect = 7.4
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 16/63 (25%)
 Frame = +2

Query  68   YVSFPSILVLHLLRSSN-VHYVISDLHVVIGNCLFPFVVAVVSRLADGF*ISVILLFRCC  244
            Y+S P+++ LH+L SS  V Y +S    VI +C      AV+S +A       ++LF C 
Sbjct  199  YISAPTVVFLHILFSSTAVLYPVS----VILSC----ESAVLSGVA-------LMLFACI  243

Query  245  LWL  253
            +WL
Sbjct  244  VWL  246


>gi|15230886|ref|NP_188589.1|  cationic amino acid transporter [Arabidopsis thaliana]
 gi|9294126|dbj|BAB01977.1|  unnamed protein product [Arabidopsis thaliana]
Length=479

 Score = 28.1 bits (61),  Expect = 9.6
 Identities = 14/37 (37%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = +2

Query  80   PSILV-LHLLRSSNVHYVISDLHVVIGNCLFPFVVAV  187
            PS+LV L ++ ++   ++IS + +V+G CL+PF+  V
Sbjct  404  PSLLVILVMVLAAPKTFLISGVIIVLGFCLYPFLTLV  440

Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 222 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 310 Length of database: 101054579 Length adjustment: 72 Effective length of query: 238 Effective length of database: 80653451 Effective search space: 2500256981 Effective search space used: 2500256981 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)

Distribution of 4 Blast Hits on the Query Sequence