DnaJ[hsp]       ------------------------------------------------------------
DnaK            MTKKNTNSSPIIGIDLGTTNSCVACMENGQPKVITNSEGDRTTPSVVAFKGDEIIVGKAA 60
GrpE            ------------------------------------------------------------
                                                                            

DnaJ[hsp]       ------------------------------------------MKQKKDYYEVLELSRDAK 18
DnaK            KRQMVTNPNTILSIKREMGKKGYYKEYNGKKYTPQEISAIILQNLKKQAEDYLGMTVTEA 120
GrpE            ------------------------------------------------MQEFMNFEECSK 12
                                                                  : : :     

DnaJ[hsp]       LDDIKKAYRRLSKKYHPDVCKEANADAK---FKEVQEAFDVLSNTNKRAQYDQMGHNFNN 75
DnaK            VITVPAHFNDAQRQATKDAGKIAGLDFKRIFNEPTAAAFSYGLDKNTQKEQNILVFDLGG 180
GrpE            QNTNNCKQHEKNIDENNCSCKEKKVQSKKVSSDHSSSEDNASSDINSNKAETLTLNCGDQ 72
                        .  . .      *    : *    .      .   : *..          . 

DnaJ[hsp]       QGFNSDFQGFQSANF-------------EEFEDLFSSFFGRRKSNRHQEDIKGED----- 117
DnaK            GTFDVSILNIAEGKFQVLATAGDNVLGGDNFDDAIVEFLIRIFREEHGIDLKKNKDLTAL 240
GrpE            SDNKNSISDIESNKF---------------------------IPNEN------------- 92
                   . .: .: . :*               :   :  ::     :.:   :         

DnaJ[hsp]       -------HHIKLTISFMESVLGTQKTVTFNVKENCEKCDGTGAKTKNDIRICNVCK---- 166
DnaK            QRLREAAEMAKKELSNVVSTVISLPFISMAADQTPLHLEYTLTRTKFNEITKNLVDRCIT 300
GrpE            ------------DFQMLKKQLNDLKAENVNLKRDLQEAHQQRTNDN-------------- 126
                             :. : . :      ..  ..   . .   :. :       :      

DnaJ[hsp]       ------GNGYISYTQQGWFVSVFG-------KQICPECGGNKKIYFRPECKFCKGVGMVK 213
DnaK            PLRQGLKDAKLQVSQIDQVILVGGSTRIPAIQELVTRELGNKKLNKSVNPDEAVALGAAI 360
GrpE            ------------------------------LKYLADFDNFKKRITVQTNREIKYALTDFI 156
                          :       .: :         : :      :*::    : .   .:    

DnaJ[hsp]       S--------EHKVTLNIP---AGVESG---------MRLKSPNQGHQGPSGAPNGDLYVD 253
DnaK            QGGILRGDVQDIVLLDVTPLSLGIETLGGIFTKLIDRNTTIPTSKSQIFSTAVANQSSVD 420
GrpE            K------------------------------------NILIPLEQFEKVLEMPKVDDSVK 180
                .           : : :      :             .   * .  :        :  *.

DnaJ[hsp]       INVQPHKTFQRKGNDIFSSILINFYQAALGTIINVDTIHGNVQLKIPAGTQTDTKFRLKN 313
DnaK            INVLQGERALAKDNQLLGSFQLTGIPPAPKGVPQIEVTFDINVNGIVSVSAKDLSTKIEN 480
GrpE            SFLLGFKMIHKQVKDILQKEGVEEIKALG---VKFDPNFHYALEKISDLKQPNG------ 231
                  :   :    : :::: .  :    .    : :.:  .      *   .  :    :  

DnaJ[hsp]       KGVPYVNSPFSIG------------------DHYVIVKIYTPQNLSNTQKKLFEQLEELE 355
DnaK            SITVSGGSGLSEEEIQKMIKDAEKNAETDKIQKERIVLRNDADNFIFQTRQTLESLKDSI 540
GrpE            -----------------------------------INVLVLQKGFLYKDLVIKPAMVKVN 256
                         :                         *      ..:          : .  

DnaJ[hsp]       ELNRKSKTNSSWF---------------------------------------- 368
DnaK            EEQEKNDIEAKIQDLEQTLKGDDYDSIKEKLSILEKASQQLAVKAYQKAQQQK 593
GrpE            EWSDKNND--------------------------------------------- 264
                * . *..