CLUSTAL W Alignment of Phytoplasma associated with Solanaceae family (16 S r RNA seq): |
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ColumbiaBasin -----AAGAGTTTGATCCTGGCTCAGGATTAACGCTGGCGGCGTGCCTAATACATGCAAG 55 Washington ------------------------------AACGCTGGCGGCGCGCCTAATACATGCAAG 30 Nebraska ------------------------------AACGCTGGCGGCGCGCCTAATACATGCAAG 30 Texas ------------------------------AACGCTGGCGGCGCGCCTAATACATGCAAG 30 Capsicuum ---------GCGAATTTGGACACTTCAAGTCTGTACGACTCCTCAGAATGGACATGCAAG 51 Petunia ------------------------------------------------------------ Withania ----------------------------------------------------CATGCAAG 8 Potato ATACGAAGAGAATGATCCTGGCTCAGGATTAACGCTGGCCGCGTGCCTAATACATGCAAG 60 Sweet ---------------------------------------GGCGTGCCTAATACATGCAAG 21 Tomato ------------------------------------------------------------ ColumbiaBasin TCGAGCGAAAACCCCTTAAA--AGGTTTTAGTGGCGAACGGGTGAGTAACACGTAAGTAA 113 Washington TCGAACGAAAACCCCTTAAA--AGGTTTTAGTGGCGAACGGGTGAGTAACACGTAAGTAA 88 Nebraska TCGAACGGAAGTTTCTTCGG--AAATTTTAGTGGCGAACGGGTGAGTAACGCGTAAGCAA 88 Texas TCGAACGGAAGTTTCTTCGG--AAATTTTAGTGGCGAACGGGTGAGTAACGCGTAAGCAA 88 Capsicuum TCGAACGGAAGTTAAAGCAATTAAACTTTAGTGGCGAACGGGTGAGTAACGCGTAAGGAA 111 Petunia ------------------------------------------------------------ Withania TCGAACGGAAGTTTAAGCAATTAAACTCTAGTGGCGAACGGGTGAGTAACGCGTAAGCAA 68 Potato TCGAACCCAAGTTTAAGCAATTAAACTTTAGTGGCGAACGGGTGAGTAACGCGTAAGCAA 120 Sweet TCGAACGGAAGTTTAAGTAATTAAACTTTAGTGGCGAACGGGTGAGTAACGCGTAAGCAA 81 Tomato ------------------------------------------------------------ ColumbiaBasin CCTGCCTTTAAGACGAGGATAACAATTGGAAACGGTTGCTAAGACTGGATAGGAAACAAA 173 Washington CCTGCCTTTAAGACGAGGATAACAATTGGAAACGGTTGCTAAGACTGGATAGGAAACAAA 148 Nebraska TCTGCCCCTAAGACGAGGATAACAGTTAGAAATGACTGCTAAGACTGGATAGGAGATAAG 148 Texas TCTGCCCCTAAGACGAGGATAACAGTTAGAAATGACTGCTAAGACTGGATAGGAGATAAG 148 Capsicuum TCTGCCCCTAAGACGAGGATAACAGTTGGAAACGACTGCTAAGACTGGATAGGAGACAAG 171 Petunia ---------------------------TACGACTGCTGCTAAGACTGGATAGGAGACAAG 33 Withania TCTGCCCCTAAGACGAGGATAACAGTTGGAAACGACTGCTAAGACTGGATAGGAGACAAG 128 Potato TCTGCCCCTAAGACGAGGATAACAGTTGGAAACGACTGCTAAGACTGGATAGGAGACAAG 180 Sweet TCTGCCCTTAAGACTAGGATAACAGTTGGAAACGATTGCTAAGACTGGATAGGAGATAAG 141 Tomato ------------------------------------------------------------ ColumbiaBasin AAGGCATCTTTTTGTTTTTAAAAGACCTTCTTACGAAGGTATGCTTAAAGAGGGGCTTGC 233 Washington AAGGCATCTTTTTGTTTTTAAAAGACCTTCTTACGAAGGTATGCTTAAAGAGGGGCTTGC 208 Nebraska AAGGCATCTTCTTGTTTTTAAAAGACCTAGTGAT--AGGTATGTTTAGGGAGGAGCTTGC 206 Texas AAGGCATCTTCTTGTTTTTAAAAGACCTAGTGAT--AGGTATGTTTAGGGAGGAGCTTGC 206 Capsicuum AGGGCATCTTCTTGTTTTTAAAAGACCTAGCAAT--AGGTATGCTTAGGGAGGAGCTTGC 229 Petunia AAGGCATCTTCTTGTTTTTAAAAGACCTAGCAAT--AGGTATGCTTAGGGAGGAGCTTGC 91 Withania AAGGCATCTTCTTGTTTTTAAAAGACCTAGCAAT--AGGTATGCTTAGGGAGGAGCTTGC 186 Potato AAGGCATCTTCTTGAAATTAAAAGACCTAGCAAT--AGGTATGCTTACCGAGGAGCTTGC 238 Sweet AAGGCATCTTTTTATTTTTAAAAGACCTAGCAAT--AGGTATGCTTAAGGAGGAGCTTGC 199 Tomato ------------------------------------------------------------ ColumbiaBasin GCCACATTAGTTAGTTGGTAGGGTAAAAGCCTACCAAGACGATGATGTGTAGCTGGACTG 293 Washington GCCACATTAGTTAGTTGGTAGGGTAAAAGCCTACCAAGACGATGATGTGTAGCTGGACTG 268 Nebraska GTCACATTAGTTAGTTGGTAGGGTAAAAGCCTACCAAGACGATGATGTGTAGCCGGACTG 266 Texas GTCACATTAGTTAGTTGGTAGGGTAAAAGCCTACCAAGACGATGATGTGTAGCCGGACTG 266 Capsicuum GTCACATTAGTTAGTTGGTGGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTG 289 Petunia GTCACATTAGTTAGTTGGTGGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTG 151 Withania GTCACATTAGTTAGTTGGTGGGGCAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTG 246 Potato GTCACATTAGTTAGTTGGTGGGGTAAACGCCTACCAAGACTATGATGTGTAGCCGGGCTG 298 Sweet GTCACATTAGTTTGTTGGTGGGGTAATGGCCTACCAAGACTATGATGTGTAGCCGGGCTG 259 Tomato ------------------------------------------------------------ ColumbiaBasin AGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAG 353 Washington AGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAG 328 Nebraska AGAAGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAG 326 Texas AGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAG 326 Capsicuum AGAGGTTGAACGGCCACATTGGGACTGAGACACGGCC-AAACTCCTACGGGAGGCAGCAG 348 Petunia AGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAG 211 Withania AGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAG 306 Potato AGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAG 358 Sweet AGAGGCTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAG 319 Tomato ------------------------------------------------------------ ColumbiaBasin TAGGGAATTTTCGGCAATGGAGGAAACTCTGACCGAGCAACGCCGCGTGAACGATGAAGT 413 Washington TAGGGAATTTTCGGCAATGGAGGAAACTCTGACCGAGCAACGCCGCGTGAACGATGAAGT 388 Nebraska TAAGGAATTTTCGGCAATGGAGGAAACTCTGACCGAGCAATGCCGCGTGAACGATGAAGT 386 Texas TAAGGAATTTTCGGCAATGGAGGAAACTCTGACCGAGCAATGCCGCGTGAACGATGAAGT 386 Capsicuum TAGGGAATTTTCGGCAATGGAGGAAACTCTGACCGAGCAACGCCGCGTGAACGATGAAGT 408 Petunia TAGGGAATTCTCGGCAATGGAGGAAACTCTGACCGAGCAACGCCGCGTGAACGATGAAGT 271 Withania TAGGAAATTTTCGGCAATGGAGGAAACTTTGACCGAGCAACGCCGCGTGAACGATGAAGT 366 Potato TACCGAATTTTCGGCAATGGAGGAAACTCTGACCGAGCAACGCCGCGTGAACGATGAACT 418 Sweet TAGGGAATTTTCGGCAATGGAGGAAACTCTGACCGAGCAACGCCGCGTGAATGATGAAGT 379 Tomato ------------------------------------------------------------ ColumbiaBasin ATTTCGGTATGTAAAGTTCTTTTATTGAAGAAGAAAAAGTAGTGGAAAAACTATATTGAC 473 Washington ATTTCGGTATGTAAAGTTCTTTTATTGAAGAAGAAAAAGTAGTGGAAAAACTATATTGAC 448 Nebraska ATTTCGGTACGTAAAGTTCTTTTATTAGAGAAGAAAAGATGGTGGAAAAACCATTATGAC 446 Texas ATTTCGGTACGTAAAGTTCTTTTATTAGAGAAGAAAAGATGGTGGAAAAACCATTATGAC 446 Capsicuum ATTTCGGTACGTAAAGTTCTTTTATTAGGGAAGAATAAATGATGGAAAAATCATTCTGAC 468 Petunia ATTTCGGTACGTAAAGTTCTTTTATTAGGGAAGAATAAATGATGGAAAAATCATTCTGAC 331 Withania ATTTCGGTACGTAAAGTTCTTTTTTTAGGGAAGAATAAATGATGGAAAAATCATTCTGAC 426 Potato ATTTCGGTACGTAAAGTTCTTTTATTAGGGAAGAATAAATGATGGATTTATCATTCTGAC 478 Sweet ATTTCGGTACGTAAAGTTCTTTTATTAGGGGAGAAAAGATGGCGGAAAAACCATTATGAC 439 Tomato ------------------------------------------------------------ ColumbiaBasin GTTATTCAATGAATAAGCCCCGGCTAACTATGTGCCAGCAGCCGCGGTAAGACATAGGGG 533 Washington GTTATTCAATGAATAAGCCCCGGCTAACTATGTGCCAGCAGCCGCGGTAAGACATAGGGG 508 Nebraska GGTACCTAATGAATAAGCTCCGGCTAACTATGTGCCAGCAGCCGCGGTAATACATAGGGA 506 Texas GGTACCTAATGAATAAGCTCCGGCTAACTATGTGCCAGCAGCCGCGGTAATACATAGGGA 506 Capsicuum GGTACCTAATGAATAAGCCCCGGCTAACTATGTGCCAGCAGCCGCGGTAATACATAGGGG 528 Petunia GGTACCTAATGAATAAGCCCCGGCTAACTATGTGCCAGCAGCCGCGGTAATACATAGGGG 391 Withania GGTACCTAATGAATAAGCCCCGGCAAACTATGTGCCAGCAGCCGCGGTAATACATAGGGG 486 Potato GGTACCTAATGAATAAGCCCCGGCTAACTATGTGCCAGCAGCCGCGGTAATACATAGGGG 538 Sweet GGTACCTAATGAATAAGCCCCGGCTAACTATGTGCCAGCAGCCGCGGTAATACATAGGGG 499 Tomato ------------------------------------------------------------ ColumbiaBasin GCGAGCGTTATCCGGAATTA---TTGGGCGTAAAGGGTGCGTAGGCTGTTAGATAAGTCT 590 Washington GCGAGCGTTATCCGGAATTA---TTGGGCGTAAAGGGTGCGTAGGCTGTTAGATAAGTCT 565 Nebraska GCAAGCGTTATCCGGAATTA---TTGGGCGTAAAGGGTGCGTAGGCGGTTAAATAAGTTT 563 Texas GCAAGCGTTATCCGGAATTA---TTGGGCGTAAAGGGTGCGTAGGCGGTTAAATAAGTTT 563 Capsicuum GCAAGCGTTATCCGGAATTATTATTGGGCGTAAAGGGTGCGTAGGCGGTTAAATAAGTTT 588 Petunia GCAAGCGTTATCCGGAATTA---TTGGGCGTAAAGGGTGCGTAGGCGGTTAAATAAGTTT 448 Withania GCAAGCGTTATCCGGAATTA---TTGGGCGTAAAGGGTGCGTAGGCGGTTAAATAAGTTT 543 Potato GCAAGCGTTATCCGGAATTA---TTGGGCGTAAAGGGTGCGTAGGCGGTTAAATAAGTTT 595 Sweet GCAAGCGTTATCCGGAATTA---TTGGGCGTAAAGGGTGCGTAGGCGGTTAAATAAGTTT 556 Tomato ------------------------------------------------------------ ColumbiaBasin ATAATTTAATTTCAGTGCTTAACGCTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAG 650 Washington ATAATTTAATTTCAGTGCTTAACGCTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAG 625 Nebraska ATGGTATAAGTGCAATGCTCAACGTTGTGATGCTATAAAAACTGT-TTAGCTAGAGTTGG 622 Texas ATGGTATAAGTGCAATGCTCAACGTTGTGATGCTATAAAAACTGT-TTAGCTAGAGTTGG 622 Capsicuum ATGGTCTAAGTGCAATGCTCAACATTGTGATGCTATAAAAACGGT-TTAGCTTGAGTAAC 647 Petunia ATGGTCTAAGTGCAATGCTCAACATTGTGATGCTATAAAAACTGT-TTAGCTAGAGTAAG 507 Withania ATGGTCTAAGTGCAATGCTCAACATTGTGATGCTATAAAAACTGT-TTAGCTAGAGTAAG 602 Potato ATGGTCTAAGTGCAATGCTCAACATTGTGATGCTATAAAAACTGT-TTAGCTAGAGTAAG 654 Sweet ATGGTCTAAGTGCAACGCTCAACGTTGTGATGCTATAAAAACTGT-TTAGCTAGAGTTGG 615 Tomato ------------------------------------------------------------ ColumbiaBasin ATAGAGGCAAGCGGAATTCC-ATGTGTAGCGGTAAAATGTGTAAATATATGGAGGAACAC 709 Washington ATAGAGGCAAGCGGAATTCC-ATGTGTAGCGGTAAAATGTGTAAATATATGGAGGAACAC 684 Nebraska ATAGAGGCAAGTGGAATTCC-ATGTGTAGTGGTAAAATGCGTAAATATATGGAGGAACAC 681 Texas ATAGAGGCAAGTGGAATTCC-ATGTGTAGTGGTAAAATGCGTAAATATATGGAGGAACAC 681 Capsicuum ATGGAGGGACGTGAAATTCCCATGTGTAGTGGTAAAATGCGTAAATATATGGAGGAACAC 707 Petunia ATAGAGGCAAGTGGAATTCC-ATGTGTAGTGGTAAAATGCGTAAATATATGGAGGAACAC 566 Withania ATAGAGGCAAGTGGAATTCC-ATGTGTAGTGGTAAAATGCGTAAATATATGGAGGAACAC 661 Potato ATAGAGGCAAGTGGAATTCC-ATGTGTAGTGGTAAAATGCGTAAATATATGGAGGAACAC 713 Sweet ATAGAGGCAAGTGGAATTCC-GTGTGTAGTGGTAAAATGCGTAAATATACGGAGGAACAC 674 Tomato ------------------------------------------------------------ ColumbiaBasin CAGAAGCGTAGGCGGCTTGCTGGGTCTTTACTGACGCTGAGGCACGAAAGCGTGGGCAGC 769 Washington CAGAAGCGTAGGCGGCTTGCTGGGTCTTTACTGACGCTGAGGCACGAAAGCGTGGGTAGC 744 Nebraska CAGAGGCGAAGGCGGCTTGCTGGGTCTTAACTGACGCTGAGGCACGAAAGCGTGGGGAGC 741 Texas CAGAGGCGAAGGCGGCTTGCTGGGTCTTAACTGACGCTGAGGCACGAAAGCGTGGGGAGC 741 Capsicuum CAGTAGCGAAGGCGGCTTGCTGGGTCTTTACTGACGCTGAGGCACGAAAGCGTGGGGAGC 767 Petunia CAGTAGCGAAGGCGGCTTGCTGTGTCTTTACTGACGCTGAGGCACGAAAGCGTGGGGAGC 626 Withania CAGTAGCGAAGGCGGCTTGCTGGGTCTTTACTGACGCTGAGGCACGAAAGCGTGGGGAGC 721 Potato CAGTAGCGAAGGCGGCTTGCTGGGTCTTTACTGACGCTGAGGCACGAAAGCGTGGGGAGC 773 Sweet CAGAAGCGAAGGCGGCTTGCTGGGTCTTAACTGACGCTGAGGCACGAAAGCGTGGGGAGC 734 Tomato ------------------------------------------------------------ ColumbiaBasin AAA-CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTACTAAGTGTCGGGG 828 Washington AAA-CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTACTAAGTGTCGGGG 803 Nebraska AAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGTACTAAACGTTGGG- 800 Texas AAA-CAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAGTACTAAACGTTGGG- 799 Capsicuum AAA-CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTACTAAACGTTGGG- 825 Petunia AAA-CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTACTAAACGTTGGT- 684 Withania AAA-CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTACTAAACGTTGGG- 779 Potato AAA-CAGGAAAAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTACTAAACGTTGGG- 831 Sweet AAA-CAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATAAGTACTAAACGTTGGG- 792 Tomato ------------------------------------------------------------ ColumbiaBasin TAAAACTCGGTACTGAAGTTAACACATTAAGTACTCCGCCTGAGTAGTACGTACGCAAGT 888 Washington TAAAACTCGGTACTGAAGTTAACACATTAAGTACTCCGCCTGAGTAGTACGTACGCAAGT 863 Nebraska TAAAAC-CAGTGTTGAAGTTAACACATTAAGTACTCCGCCTGAGTAGTACGTACGCAAGT 859 Texas TAAAAC-CAGTGTTGAAGTTAACACATTAAGTACTCCGCCTGAGTAGTACGTACGCAAGT 858 Capsicuum TAAAAC-CAGTGTTGAAGTTAACACATTAAGTACTCCGCCTGAGTAGTACGTACGCAAGT 884 Petunia TAAAAC-TAGTGTTGAAGTTAACACATTAAGTACTCCGCCTGAGTAGTACGTACGCAAGT 743 Withania TAAAAC-CAGTGTTGAAGTTAACACATTAAGTACTCCGCCTGAGTAGTACGTACGCAAGT 838 Potato TAAAAC-CAGTGTTGAAGTTAACACATTAAGTACTCCGCCTGAGTAGTACGTACGCAAGT 890 Sweet TTAAAC-CAGTGTTGAAGTTAACACATTAAGTACTCCGCCTGAGTAGTACGTACGCAAGT 851 Tomato ------------------------------------------------------------ ColumbiaBasin ATGAAACTTAAAGGAATTGACGGGACTCCGCACAAGCGGTGGATCATGTTGTTTAATTCG 948 Washington ATGAAACTTAAAGGAATTGACGGGACTCCGCACAAGCGGTGGATCATGTTGTTTAATTCG 923 Nebraska ATGAAACTTAAAGGAATTGACGGGACTCCGCACAAGCGGTGGATCATGTTGTTTAATTCG 919 Texas ATGAAACTTAAAGGAATTGACGGGACTCCGCACAAGCGGTGGATCATGTTGTTTAATTCG 918 Capsicuum ATGAAACTTAAAGGAATTGACGGGACTCCGCACAAGCGGTGGATCATGTTGTTTAATTCG 944 Petunia ATGAAACTTAAAGGAATTGACGGGACTCCGCACAAGCGGTGGATCATGTTGTTTAATTCG 803 Withania ATGAAACTTAAAGGAATTGACGGGACTCCGCACAAGCGGTGGATCATGTTGTTTAATTCG 898 Potato ATGAAACTTAAAGGAATTGACGGGACTCCGCACAAGCGGTGGATCATGTTGTTTAATTCG 950 Sweet ATGAAACTTAAAGGAATTGACGGGACTCCGCACAAGCGGTGGATCATGTTGTTTAATTCG 911 Tomato ------------------------------------------------------------ ColumbiaBasin AAGATACACGAAAAATCTTACCAGGTCTTGACATACT-CTGCAAAGCTATAGAAATATAG 1007 Washington AAGATACACGAAAAATCTTACCAGGTCTTGACATACT-CTGCAAAGCTATAGAAATATAG 982 Nebraska AAGATACCCGAAAAACCTCACCAGGTCTTGACATGCTTTTGCAAAGCTGTAGAAATATAG 979 Texas AAGATACCCGAAAAACCTCACCAGGTCTTGACATGCTTTTGCAAAGCTGTAGAAATATAG 978 Capsicuum AAGGTACCCGAAAAACCTCACCAGGTCTTGACATGCTTCTGCAAAGCTGTAGAAACACAG 1004 Petunia AAGGTACCCGAAAAACCTCACCAGGTCTTGGCATGCTTCTGCAAAGCTGTAGAAACACAG 863 Withania AAGGTACCCGAAAAACCTCACCAGGTCTTGACATGCTTCTGCAAAGCTGTAGAAACACAG 958 Potato AAGGTACCCGAAAAACCTCACCAGGTCTTGACATGCTTCTGCAAAGCTGTAGAAACACAG 1010 Sweet AAGGTACCCGAAAAACCTCACCAGGTCTTGACATGCTTCTGCAAAGCTGTAGAAACACAG 971 Tomato ------------------------------------------------------------ ColumbiaBasin TGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTCAGTTCGTGTCGTGAGATGTT 1067 Washington TGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTCAGTTCGTGTCGTGAGATGTT 1042 Nebraska TGGAGGTTATCAGAAGCACAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTT 1039 Texas TGGAGGTTATCAGAAGCACAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTT 1038 Capsicuum TGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTT 1064 Petunia TGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTT 923 Withania TGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTT 1018 Potato TGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTT 1070 Sweet TGAAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTT 1031 Tomato --------GTCAAAGTAACTGGTTAAAAATTATTATTATCGGCTGTCCGCGGGAG-TAAT 51 *** ** *** ** ** * ** * * ** *** * * ColumbiaBasin AGGTTAAGTCCTAAAACGAGCGCAACCCTTGTCGTTAATTGCCAGCACGTAATGGTGGGG 1127 Washington AGGTTAAGTCCTAAAACGAGCGCAACCCTTGTCGTTAATTGCCAGCACGTAATGGTGGGG 1102 Nebraska GGGTTAAGTCCCGCAACGAGCGCAACCCTTGTTGTTAATTGCCATCATTAAGT--TGGGG 1097 Texas GGGTTAAGTCCCGCAACGAGCGCAACCCTTGTTGTTAATTGCCATCATTAAGT--TGGGG 1096 Capsicuum GGGTTAAGTCCCGCAACGAGCGCAACCCTTATTGTTAGTTACCAGCACGTAATGGTGGGG 1124 Petunia GGGTTAAGTCCCGCAACGAGCGCAACCCTTATTGTTAGTTACCAGCACGTAATGGTGGGG 983 Withania GGGTTAAGTCCCGCAACGAGCGCAACCCTTATTGTTAGTTACCAGCACGTAATGGTGGGG 1078 Potato GCCTTAAGTCCCGCAACGAGCGCAACCCTTATTGTTAGTTACCAGCACGTAATGGTGGGG 1130 Sweet GGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCGTTAATTGCCATCATTAAGT--TGGGG 1089 Tomato ACGTTTTCATCGGGGTTTTGTACACACC----GGCCGATCACCCTTTTAAAAAGTTGGCA 107 ** * * ** ** * * ** * *** ColumbiaBasin ACTTTAGCGAGACTGCCAATTAAACATT--GGAGGAAGGTGAGGATTACGTCAAATCATC 1185 Washington ACTTTAGCGAGACTGCCAATTAAACATT--GGAGGAAGGTGAGGATTACGTCAAATCATC 1160 Nebraska ACTTTAGCAAGACTGCCAATGATAAATT--GGAGGAAGGTGGGGACGACGTCAAATCATC 1155 Texas ACTTTAGCAAGACTGCCAATGATAAATT--GGAGGAAGGTGGGGACGACGTCAAATCATC 1154 Capsicuum ACTTTAGCAAGACTGCCAGTGATAAATT--GGAGGAAGGTGGGGACGACGTCAAATCATC 1182 Petunia ACTTTAGCAAGACTGCCAGTGATAAATT--GGAGGAAGGTGGGGACGACGTCAAATCATC 1041 Withania ACTTTAGCAAGACTGCCAGTGATAAATT--GGAGGAAGGTGGGGACGACGTCAAATCATC 1136 Potato ACTTTAGCAAGACTGCCAGTGATAAATT--GGAGGAAGGTGGGGACGACGTCAAATCATC 1188 Sweet ACTTTAGCGAGACTGCCAATGATAAATT--GGAGGAAGGTGGGGACAACGTCAAATCATC 1147 Tomato ATACC--CAAAGCCGGTGGCCATAACTTTCGCAAGAAGAGGGAAACCGCTCTAAG----- 160 * * * * * * * ** * * **** * * * ** ColumbiaBasin ATGCCCCTTATGATCTGGGCTACAAACGTGATACAATGGCTGTGACAA-AGAGTAGCTGA 1244 Washington ATGCCCCTTATGATCTGGGCTGCAAACGTGATACAATGGCTGTGACAA-AGAGTAGCTGA 1219 Nebraska ATGCCCCTTATGACCTGGGCTACAAACGTGATACAATGGCTGTTACAA-AGGGTAGCTAA 1214 Texas ATGCCCCTTATGACCTGGGCTACAAACGTGATACAATGGCTGTTACAA-AGGGTAGCTAA 1213 Capsicuum ATGCCCCTTATGACCTGGGCTACAAACGTGATACAATGGCTGTTACAA-AGGGTAGCTGA 1241 Petunia ATGCCCCTTATGACCTGGGCTACAAACATGATACAATGGCTGTTACAA-AGGGTAGCTGA 1100 Withania ATGCCCCTTATGACCTGGGCTACAAACGTGATACAATGGCTGTTACAA-AGGGTAGCTGA 1195 Potato ATGCCCCTTATGACCTGGGCTACAAACGTGATACAATGGCTGTTACAA-AGGGTAGCTGA 1247 Sweet ATGCCCCTTATGACCTGGGCTACAAACGTGATACAATGGCTGTTACAA-AGGGTGGCTAA 1206 Tomato GTAGGGGCGATGATTGCGGTTA-AGCCGTAACAGGGTAACCCTACTGGCAAGGTGGGGAT 219 * **** ** * * * * * * * * * * ** * ColumbiaBasin AACGCGAGTTTTTAGCCAATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTGTAACT 1304 Washington AACGCGAGTTTTTAGCCAATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTGTAACT 1279 Nebraska AGCGTAAGTTTTTGGCGAATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTGCAACT 1274 Texas AGCGTAAGTTTTTGGCGAATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTGCAACT 1273 Capsicuum AGCGCAAGTTTTTGGCGAATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTGCAACT 1301 Petunia AGCGCAAGTTTTTGGCGAATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTGCAACT 1160 Withania AGCGCAAGTTTTTGGCGAATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTGCAACT 1255 Potato AGCGCAAGTTTTTGGCGAATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTGCAACT 1307 Sweet AGCGCAAGTTTCTGGCGAATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTGCAACT 1266 Tomato GGCACCATTTTCCGATTCCATATAATGATATA---------------------------- 251 * * *** ** * * ColumbiaBasin CGACTTCATGAAGTTGGAATCGCTAGTAATCGCGAATCAGCATGTCGCGGTGAATACGTT 1364 Washington CGACTTCATGAAGTTGGAATCGCTAGTAATCGCGAATCAGCATGTCGCGGTGAATACGTT 1339 Nebraska CGACTTCATGAAGTTGGAATCGCTAGTAATCGCGAATCAGCATGTCGCGGTGAATACGTT 1334 Texas CGACTTCATGAAGTTGGAATCGCTAGTAATCGCGAATCAGCATGTCGCGGTGAATACGTT 1333 Capsicuum CGACTTCATGAAGTTGGAATCGCTAGTAATCGCGAATCAGCATGTCGCGGTGAATACGTT 1361 Petunia CGACCTCATGAAGTTGGAATCGCTAGTAATCGCGAATCAGCATGTCGCGGTGAATACGTT 1220 Withania CGACTTCATGAAGTTGGAATCGCTAGTAATCGCGAATCAGCATGTCGCGGTGAATACGTT 1315 Potato CGACTTCATGAAGTTGGAATCGCTAGTAATCGCGAATCAGCATGTCGCGGTGAATACGTT 1367 Sweet CGACTTCATGAAGTTGGAATCGCTAGTAATCGCGAATCAGCATGTCGCGGTGAATACGTT 1326 Tomato ------------------------------------------------------------ ColumbiaBasin CTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTAGCAATACCCGAAAGCAGTA 1424 Washington CTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTAGCAATACCCGAAAGCAGTA 1399 Nebraska CTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTGGCAATACCCAAAGCTGGTG 1394 Texas CTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTGGCAATACCCAAAGCTGGTG 1393 Capsicuum CTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTGGTAATACCCAAAGCCGGTG 1421 Petunia GACGGGGTTTGTACACACCGCCCGTCAA-------------------------------- 1248 Withania CTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTGGTAATACCCAAAGCCGGTG 1375 Potato CTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTGGAAATACCCAAAGCCGGTG 1427 Sweet CTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTGGCAATACCCAAAGCCGGTG 1386 Tomato ------------------------------------------------------------ ColumbiaBasin GCTTAACTTCGCAAG--AAGAGGGAACTGTCTAAGGTAGGGTTGATGATTGGGGTTAAGT 1482 Washington GCTTAACTTCGCAAG--AAGAGGGAACTGTCTAAGGTAGGGTTGATGATTGGGGTTAAGT 1457 Nebraska GCTTAACTTGAGTAATCAAGAGGGAACCATCTAAGGTAGGGTTGATGATTGGGGTTAAGT 1454 Texas GCTTAACTTGAGTAATCAAGAGGGAACCATCTAAGGTAGGGTTGATGATTGGGGTTAAGT 1453 Capsicuum GCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGATGATTGGGGTTAAGT 1479 Petunia ------------------------------------------------------------ Withania GCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGATGATTGGGGTTAAG- 1432 Potato GCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGTTCGATGATTGGGGTTAAGT 1485 Sweet GCCTAACTTGTGCAAGCAAGAGGGAGCCGTCTAAGGTAGGGTTGATAATTGGGGTTAAGT 1446 Tomato ------------------------------------------------------------ ColumbiaBasin CGTAACAAGGTATCCCTACCGGAAGGTGGGGATGGATCACCTCCTTTCTAAGGACTATAT 1542 Washington CGTAACAAGGTATCCCTACCGGAAGGTGGGGATGGATCACCTCCTTT------------- 1504 Nebraska CGTAACAAGGTATCCCTACCGGAAGGTGGGGATGGATCACCTCCTTTCT----------- 1503 Texas CGTAACAAGGTATCCCTACCGGAAGGTGGGGATGGATCACCTCCTTTCT----------- 1502 Capsicuum CGTAACAAGGTATCCCTACCGGAA------------------------------------ 1503 Petunia ------------------------------------------------------------ Withania ------------------------------------------------------------ Potato CGTAACAAGGT------------------------------------------------- 1496 Sweet CGTAACAAGGTATCCCTGCCGGAAGGTGGGGATGGATCACCTCCTTTCT----------- 1495 Tomato ------------------------------------------------------------ ColumbiaBasin ATACTAAAACCATCATCTTCAGTTTTGAAAGACTTAAGTAGAAAATAAGTTTTTCTTTTA 1602 Washington ------------------------------------------------------------ Nebraska ------------------------------------------------------------ Texas ------------------------------------------------------------ Capsicuum ------------------------------------------------------------ Petunia ------------------------------------------------------------ Withania ------------------------------------------------------------ Potato ------------------------------------------------------------ Sweet ------------------------------------------------------------ Tomato ------------------------------------------------------------ ColumbiaBasin AGCGCCAAAGGGCCTATAGCTCAGTTGGTTAGAGCACACGCCTGATAAGCGTGAGGTCGG 1662 Washington ------------------------------------------------------------ Nebraska ------------------------------------------------------------ Texas ------------------------------------------------------------ Capsicuum ------------------------------------------------------------ Petunia ------------------------------------------------------------ Withania ------------------------------------------------------------ Potato ------------------------------------------------------------ Sweet ------------------------------------------------------------ Tomato ------------------------------------------------------------ ColumbiaBasin TGGTTCAAGTCCATTTAGGCCCACCAAAAAAAGGTCCTGCTTAAAAAGTTCTTTGAAAAG 1722 Washington ------------------------------------------------------------ Nebraska ------------------------------------------------------------ Texas ------------------------------------------------------------ Capsicuum ------------------------------------------------------------ Petunia ------------------------------------------------------------ Withania ------------------------------------------------------------ Potato ------------------------------------------------------------ Sweet ------------------------------------------------------------ Tomato ------------------------------------------------------------ ColumbiaBasin TAGATGAACATGCCTTAAAACTTTCATAAAGTTGAAGGAAGTAAGGGCATATAGTGGATG 1782 Washington ------------------------------------------------------------ Nebraska ------------------------------------------------------------ Texas ------------------------------------------------------------ Capsicuum ------------------------------------------------------------ Petunia ------------------------------------------------------------ Withania ------------------------------------------------------------ Potato ------------------------------------------------------------ Sweet ------------------------------------------------------------ Tomato ------------------------------------------------------------ ColumbiaBasin TCCTTGGCACTAAGAGCCGATGAAGGACG 1811 Washington ----------------------------- Nebraska ----------------------------- Texas ----------------------------- Capsicuum ----------------------------- Petunia ----------------------------- Withania ----------------------------- Potato ----------------------------- Sweet ----------------------------- Tomato ----------------------------- |