LOCUS       BAD04583                 671 aa            linear   BCT 17-FEB-2004
DEFINITION  DNA gyrase beta subunit [Onion yellows phytoplasma OY-M].
ACCESSION   BAD04583
VERSION     BAD04583.1  GI:39722093
DBSOURCE    accession AP006628.1
KEYWORDS    .
SOURCE      Onion yellows phytoplasma OY-M
  ORGANISM  Onion yellows phytoplasma OY-M
            Bacteria; Firmicutes; Mollicutes; Acholeplasmatales;
            Acholeplasmataceae; Candidatus Phytoplasma; Candidatus Phytoplasma
            asteris.
REFERENCE   1
  AUTHORS   Oshima,K., Kakizawa,S., Nishigawa,H., Jung,H., Wei,W., Suzuki,S.,
            Arashida,R., Nakata,D., Miyata,S., Ugaki,M. and Namba,S.
  TITLE     Reductive evolution suggested from the complete genome sequence of
            a plant-pathogenic phytoplasma
  JOURNAL   Nat. Genet. 36 (1), 27-29 (2004)
   PUBMED   14661021
REFERENCE   2  (residues 1 to 671)
  AUTHORS   Oshima,K., Kakizawa,S., Nishigawa,H., Ugaki,M. and Namba,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2003) Shigetou Namba, The University of Tokyo,
            Department of Integrated Biosciences, Graduate School of Frontier
            Sciences; 202 Bioscience Bldg., 5-1-5 Kashiwanoha, Kashiwa, Chiba
            277-8562, Japan (E-mail:snamba@ims.u-tokyo.ac.jp,
            Tel:81-4-7136-3700, Fax:81-4-7136-3701)
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Onion yellows phytoplasma OY-M"
                     /strain="onion yellows"
                     /db_xref="taxon:262768"
                     /note="line OY-M"
     Protein         1..671
                     /product="DNA gyrase beta subunit"
     Region          1..671
                     /region_name="GyrB"
                     /note="Type IIA topoisomerase (DNA gyrase/topo II,
                     topoisomerase IV), B subunit [DNA replication,
                     recombination, and repair]; COG0187"
                     /db_xref="CDD:30536"
     Region          34..134
                     /region_name="HATPase_c"
                     /note="Histidine kinase-like ATPases; This family includes
                     several ATP-binding proteins for example: histidine
                     kinase, DNA gyrase B, topoisomerases, heat shock protein
                     HSP90, phytochrome-like ATPases and DNA mismatch repair
                     proteins; cd00075"
                     /db_xref="CDD:28956"
     Region          221..417
                     /region_name="TopoII_Trans_DNA_gyrase"
                     /note="TopoIIA_Trans_DNA_gyrase: Transducer domain, having
                     a ribosomal S5 domain 2-like fold, of the type found in
                     proteins of the type IIA family of DNA topoisomerases
                     similar to the B subunits of E; cd00822"
                     /db_xref="CDD:48467"
     Region          443..560
                     /region_name="TOPRIM_TopoIIA_GyrB"
                     /note="TOPRIM_TopoIIA_GyrB: topoisomerase-primase (TOPRIM)
                     nucleotidyl transferase/hydrolase domain of the type found
                     in proteins of the type IIA family of DNA topoisomerases
                     similar to the Escherichia coli GyrB subunit; cd03366"
                     /db_xref="CDD:48239"
     Region          588..660
                     /region_name="DNA_gyraseB_C"
                     /note="DNA gyrase B subunit, carboxyl terminus; pfam00986"
                     /db_xref="CDD:41059"
     CDS             1..671
                     /gene="gyrB"
                     /locus_tag="PAM498"
                     /coded_by="AP006628.1:569895..571910"
                     /note="identified by sequence similarity; putative"
                     /transl_table=11
ORIGIN      
        1 mknynadsiq ilegleavrk rpgmyigsta qkglhhlvwe ivdnsideal aghankitle
       61 ilpgeiisvs dngrgipvdi hpktgkpave tilttlhagg kfdnssykvs gglhgvgasv
      121 vnalstwftv eihlnkqiyf qkyekgiavs plevigktnk rgttiqflad peifqettiy
      181 nfdtlkermq qlsflnkglk lniadkryek etvfnfchek glqdyldfin tshkqtpfhe
      241 ifylekefqk lafeivfeyt tkirppkkda qgneieekeg kdaipnytqn qkifsfvnni
      301 ptheggthee gfklalnrvi skyakefnll kkdehllsed ilegitaiis lkhqypqfeg
      361 qtkaklante vrqitsqlfg eflekyllen pqdsrkiidk cllsanarla akrarevvrn
      421 kpldslgfas kladcrskdp hiselyiveg dsaggsakqg rdsrfqailp lrgkvlnvek
      481 sldakiltnk eiksliqaig aginigkgkd fnmdkiryhk iiimtdadvd gahirtlllt
      541 fffrhfrkli ekgyiyfarp plykyqkgkg apkyfydeka kqtfatknnl kdgfqrykgl
      601 gemnpnqlwe ttmdpetrtl lkaslkdaln alsdeealme adqtfnmlmg ekvlprknfi
      661 lekaleadld v
//