CLUSTAL W (1.83) multiple sequence alignment
Capsicum ------------------------------------------------------------
Coffea ------------------------------------------------------------
Solanum CTTAATTTTGGGATCTCGAAGTTTACTTGGCCCCTATAATTGTGCCACGTGTCATGTTCA 60
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------------------------------------------
Hordeum ------------------------------------------------------------
Capsicum ------------------------------------------------------------
Coffea ------------------------------------------------------------
Solanum TTGTACCCTACCAATACCGACACACTTTGTTCCACAAAGTTATCCAACCAAGGCCGACAC 120
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------------------------------------------
Hordeum ------------------------------------------------------------
Capsicum ------------------------------------------------------------
Coffea ------------------------------------------------------------
Solanum TATCTGGTCCCACAAGGACGACCTCACACGTTGTCATCCTACGTGTGAGATTTTCATTGG 180
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------------------------------------------
Hordeum ------------------------------------------------------------
Capsicum ------------------------------------------------------------
Coffea ------------------------------------------------------------
Solanum CGTTTGTCACCGTCAAGAGTACAGCGTGTCTGCTTCTACATTATTCTAATTTCTTCTTTT 240
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------------------------------------------
Hordeum ------------------------------------------------------------
Capsicum ------------------------------------------------------------
Coffea ------------------------------------------------------------
Solanum TAATAATGTACACATCCTTTTTCATCACATCTGTCGTGTAATAGAGTAAGCAAACTTATT 300
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------------------------------------------
Hordeum ------------------------------------------------------------
Capsicum ------------------------------------------------------------
Coffea ------------------------------------------------------------
Solanum CCGTGAGAATGGTCACATCATTATTTATCTGGATCGAGTCTTGCGTATGGAGAAAATTTT 360
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------------------------------------------
Hordeum ------------------------------------------------------------
Capsicum ------------------------------------------------------------
Coffea ------------------------------------------------------------
Solanum GTTAGAAGTGCTATGTCCGAATGAGCCCCGCACGATTCAGATTTAGTTGGAGCTTTAATA 420
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------------------------------------------
Hordeum ------------------------------------------------------------
Capsicum ------------------------------------------------------------
Coffea ------------------------------------------------------------
Solanum CCGCTTCGATTAATATAAGTAAAGATTATTTGTCCACTTGTCGTGCTAACATGGCGAGTA 480
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------------------------------------------
Hordeum ------------------------------------------------------------
Capsicum ------------------------------------------------------------
Coffea ------------------------------------------------------------
Solanum TATAAAATTGATATCCACTGGAAAGTGTGAAGAACAAAAAAGGCCACGTAGACGTCGGTT 540
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------------------------------------------
Hordeum -------------------------------------------------TCGCCACTAGT 11
Capsicum ------------------------------------------------------------
Coffea ------------------------------------------------------------
Solanum TAACTTGGTGTACTTGATTACTCTTTATTATGAGACGTTTGAACTCCTTTATATTATATC 600
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------------------------------------------
Hordeum AAGCAAGGCATACCGGGCTGGGGCCCCTCTCGTTGGGTGGCCCGGGGCGGCCGCCCCGCT 71
Capsicum ------------------------------------------------------------
Coffea ------------------------------------------------------------
Solanum GAAAAATAAAAAAATCTTAATCAGCGTAACGTCCGTGTTTGTAATTGCTATATAAGCGCA 660
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------------------------------------------
Hordeum CGCCCTGCCCCATGACCGGGCCTGACTCTAACCCTAGGATCCAAACACGACAGATGAAGT 131
Capsicum ------------------------------------------------------------
Coffea ------------------------------------------------------------
Solanum CCAAGTCTCAATTTCTACCACATCCAATTCAAATATCATTTTAATATTCAAACTTTTACT 720
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------------------------------------------
Hordeum CACGAAACAAGGTGCACTGCCCTATAATTTGTTCATCTTACTCACCGTCACCGTGCTGTA 191
Capsicum ------------------------------------------------------------
Coffea ------------------------------------------------------------
Solanum TTACCTTAAAGTTGTTGATAATTTCTTTGATGAAAAAAAGAAGAAGAAATATGGCTGATC 780
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------------------------------------------
Hordeum CTAAACTGTAGTACT--ACTGTAACATCAAAAATAGAACGCCGAGCTAATCTGTCAAGTC 249
Capsicum ------------------------------------------------------------
Coffea ------------------------------------------------------------
Solanum AGTACGAACAGAACAAACCATCAGTTGAAGAGACTGTTGGTGCCAACGTGGAGGCTACTG 840
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------------------------------------------
Hordeum ACCCTTCCAGAACAGCCGAACGCGTACGTGTCAGTGTCGCCACCGACACGTTCAGGACCG 309
Capsicum ------------------------------------------------------------
Coffea ------------------------------------------------------------
Solanum ATCGTGGTTTGTTTGATTTCATTGGAAAAAAAGAAGAGGAAAAACCAAGTCATGCTCATG 900
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------------------------------------------
Hordeum CGGCGCGTGCACGCGTCCCGGCTATCCGTGCGCCCACGCCGACCACTTGCGCCGCCGGAC 369
Capsicum ------------------------------------------------------------
Coffea ------------------------------------------------------------
Solanum AAGAAGAGGCAATTTCATCTGAGTTTTGTGAGAAAGTTAAAGTAAGTGAAGAAGAAGAAC 960
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------------------------------------------
Hordeum TCACCACGAAAGCACACGTACCCCCCCTGCAGTAGCCACCTGGCCTGCCACATCCCGTTA 429
Capsicum ------------------------------------------------------------
Coffea ------------------------------------------------------------
Solanum ACAAGGAGAAGGAAAAGAAAGAAGAGAAGAAACTTCATCGATCAAGTAGCAGCTCTAGTA 1020
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------------------------------------------
Hordeum CAACCCGGCCTGTCGCCACGGTATAAATATCCACCCGGCGTCACTCTTCGCTGCACAACA 489
Capsicum --------GTCAAAACTTTTACTTTAGTGATCATTCTTTGCTTTATTCTTACAAGTTTCT 52
Coffea --------------------------------ATTTTTTGCTGTTTCCT-----GTTACA 23
Solanum GCTCGGTAAGTCTCTCTTTCATCCTCGATTAAAGTTTACCTCAAATCAATAAATATAACA 1080
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------TAACCAACAAACTTCACTTTCTTTGTG-----CATT 31
Hordeum CGACCCACGAGCTGTCTGTCTGTCTGTCTGTCATCCGAAGTCCAAAGCTAGCTGAAGGCA 549
Capsicum C-TTTGTTTTCTTTGAATTGAAACAAAGGAAAAAATGGCTGATCAGTATGAACACAACAA 111
Coffea T-TCTGCTTTACGTACAT-----CCATCAGCAAAATGGCCGA---GTATGATCAGAGTAA 74
Solanum CACTTCTTTTATGTACATATTTTTTCTCACGATCATATTTATTTCACATAAATTATATGG 1140
Arabidopsis ---ACCTCTTATTTTCAT-CTGCTTTTGAATTTCAAACCTTC---ACATAAAAAAAATAC 53
Ammopiptanthus CTTTCTGCTTATACACACATACATAATGGCACACATTCAGAGTGGGTATGGTGATCAAGA 91
Hordeum CAACACTTCAACTCGCAGTCCGGTTCAGGGAGAAGAGTCCATCATCCAAGGTAGTAGTAG 609
* *
Capsicum GCC-TTCAGTTGA----AGAGACTACCACTGGTGCTAA--CGTGGAATCAACAGATCGTG 164
Coffea CAT-CAAGGTTGA----GGAG---------GGATCAGC--TGTCGAGGCCACGGATCGCG 118
Solanum TCC-GCTGATTAATTTCAATTTAAGTAATTGAGTCTATAGTGTGGGATCCGATAATTTTA 1199
Arabidopsis TTT-TGAATCCGT-----GTTTCATTCATCGAATCTTTT--------TCCGATAACTATG 99
Ammopiptanthus TCG-TAAGACTAT------TGATGAGTATGGAAACCCTGTGAGGCAAACTGACCAACATG 144
Hordeum CAGGCAAGATGGAGTTCCAAGGGCAGCACGACAACCCCGCCAACCGCGTCGACGAGTACG 669
* *
Capsicum ---GTTTGTT--TGATTTCCTAGGGAAAAAGGAGGAGGAAAAACCAACTCATGCTCATGA 219
Coffea ---GACTCTT--CAACTTGGGCAAGAAAGAGGAAGTGAAGAAGTG---------TGATCA 164
Solanum TGCAACTATTAATAATTAGGAATTTGTATACTTGAAAAAGAAGTCA-TAGTTGTTACTAA 1258
Arabidopsis GCTGAGGAAAT-CAAGAATGTTCCTGAACAGGAGGTGCCAAAGG--------------TA 144
Ammopiptanthus GCAACCCAGTC-AATCCCACTACTGGTACCGGTGCTGGGTATGGGGAGAGTGGTGGCACC 203
Hordeum GCAACCCGTTC-CCGCTGGCCGGCGGCATGGGGGGAGCGCACGCCGCTCCCGGCACCGGC 728
* *
Capsicum AGAAC-AAGCAATTT--CATCTGAGTTTGGTGAGA--AAGTTAAAGTAGGTGA-AGAAGA 273
Coffea AGGCC-AGGCCATCT--CTGCGGAGTTTGATGAGA--AAGTGCGTGTTTCTGA-ACCAG- 217
Solanum TAGTC-AAGTAAATTTACTGTTTACTTTTCCTAGC--TGGTATGAATAAATTATACGTGA 1315
Arabidopsis GCAAC-AGAGGAATCATCGGCAGAGGTTACAGATC--GTGGATTGTTCGATTTCTTGGGA 201
Ammopiptanthus GGATA-TGGTGGACCCACTGGTGACACAGCAGGAT--ATGGAAGTACTGGTTACGGAACC 260
Hordeum GGGCAGTTCCAGGCCCGCAGGGAGGAGCACAAGACCCGTGGGATACTGCATCGCTCCGGC 788
* * *
Capsicum ACACAAGG----AGGAGGAGAAAAAGAAAGAAGAG------AA---GAAACTTCATCGAT 320
Coffea --ACAAGG----AGGAGGGAAAGAAGCATGGTGGTCTTCTCGA---GAAGCTCCACCGAT 268
Solanum TCATAGAATTATATATTCATACAGACTATTTTTAGTTTAATCA---GTTGAGTGAACGAT 1372
Arabidopsis A-AGAAGA----AAGACGAAACAAAACCAGAGGAGACT--CCG---ATCGCTTCAGAGTT 251
Ammopiptanthus ACCCCTGGTGACAAAGCAGGATATGGAACTACTACTGGTGGTG---ATGGAACCACAACT 317
Hordeum AGCTCCAGCTCCAGCTCGGTATGATGCTCTGTCGACACACACATGTACGCATTCACGTGC 848
* * *
Capsicum C-------AAGTAGCAGCTCTAGTA-GCTCAAGTGATGAGGAGGAAGAAGTAGTAGGAGA 372
Coffea C-------TGGTAGCAGCTCCAGCA-GCTCAAGTGA------GGAAGAAGTAGAAGAGGG 314
Solanum A-------TATTAAT-GCTTGATCG-ATTTGCAGAGTGATGAGGAGGAAGAAATTGGAGA 1423
Arabidopsis T-------GAGCAGAAGGTTCAT---ATTTCAGAGCCGGAGCCAGAGGTTAAACACGAAA 301
Ammopiptanthus GGGTATGGAAGCGGTGGTGGAACTG-GTCATGGTACAACCACTGGTGGCACTACGGGTAC 376
Hordeum TTCTGTATGTTTAGATGCTGATTTCCGTGCCTGTATGCGTGTGTGTGTGTGTGCAGTCCT 908
* *
Capsicum AGATGGACA-GAAAATCAAGAAGAAGAAAAAGAAGGGATTGAAGGACAAGATGAAGGACA 431
Coffea TGGTGAGAA-GAAGAAGAAAAAGAAGGAAAAGAAGGGTTTGAAGGACAAGATCAAGGAGA 373
Solanum GGATGGACA-GATAATCAAGAAGAAGAAAAAGAAGGGATTGAAGGAAAAGATTAAGGAAA 1482
Arabidopsis GTCTTCTTG-AAAAGCTTCACCGAAGCGACAGTTCTTCTAGCTCCTCAAG-TGAGGAAGA 359
Ammopiptanthus TACTGAGTATGGAAGCGGTGGTGGAACTACAGGTACTACTGGATATGGAAGCGGTGGGCA 436
Hordeum CCGAGGACGACGGCATGGGCGGGAGGAGGAAGAAGGGCATGAAGGAGAAGATCAAGGAGA 968
* ** * * * *
Capsicum A-----------AATATCTG-GTGATCACAAGGAAGAAGACAAG------AAAACG---- 469
Coffea A-----------GATATCGG-GTGATAAGAAGGACGAAGAAAAGGTTGA-AAAATGTGAG 420
Solanum A-----------AATATCTG-GTGATCACAAGGAAGAAGTGAA---------AACA---- 1517
Arabidopsis A-----------GGT-TCAG-ATGGTGAGAAGAGGAAGAAGAAG--------AAGGAGAA 398
Ammopiptanthus AC-------ACGAACACCAACACCAACACCATGGGAGGGAGAAGGAGGA-GCATGGCCAT 488
Hordeum AGCTCCCCGGCGGCCACAAGGACAACCAGCAGCACATGGCGACGGGGACTGGAACCGGAG 1028
* * * * *
Capsicum GAAGACACTT-CAGT----TCCAGTTGAGAAGTACG------------------------ 500
Coffea GAAGACACGT-CTAT----CCCAGTTGAGAAATATGCCGAACCGGCCCATGCAGATGCTG 475
Solanum GAGGATACCT-CAGT----TCCAGTTGAGAAATACG------------------------ 1548
Arabidopsis GAAGAAGCCAACTAC----TGAAGTTGAGGTAAAGG------------------------ 430
Ammopiptanthus GAATTCGCATCTCATGG--TGCGCCTGGTGGGTATG------------AAGCAGCATCGG 534
Hordeum GAGCATACGGGCCGGGAACTGGAACTGGTGGAGCCTACGGGCAGCAAGGGCACGCAGGAA 1088
** * **
Capsicum ---AGGAAACTGAGGAGAAAAAGGGATTTCTAGACAAGATTAAGGACAAGTTGCCAGGTG 557
Coffea CTCATGAACCAGAGGAGAAAAAGGGCTTCTTAGATAAGATCAAGGAGAAACTACCAGGTG 535
Solanum ---AGGAAACAGAGGAGAAAAAAGGATTTCTGGAAAAAATTAAGGAGAAATTGCCAGGTG 1605
Arabidopsis ---AGGAA------GAGAAGAAAGGGTTTATGGAGAAGTTGAAAGAGAAGCTTCC----- 476
Ammopiptanthus GAGAGCAACAGTACGAGAAGAAAGGGATAATGAATAAGATCAAGGAGAAGCTTCC----- 589
Hordeum TGGCCGGCACCGGCGAGAAGAAGGGGATCATGGACAAGATCAAGGAGAAGCTGCCG---G 1145
***** ** ** * * * ** * ** ** ** * **
Capsicum GAGGACAGAAGAAGACGGAGGAGGCCGCTGCACCGCCATCGCCACCACCACCACCAGC-T 616
Coffea GTGGTCAGAAGAAGACTGAGGAAGTCGCAGCAGCAGCACCGCCTCCTCCTCCGGCAGAGT 595
Solanum GCGGACATAAGAAGACGGAGGAAGTGGCGGCGCCACCACCACCACCACCGGC-------T 1658
Arabidopsis -TGGACACAAGAAACCTGAAGACGGTTCAGCCGTCGCTGCGGCACCGGTGGTTGTTCC-T 534
Ammopiptanthus -TGGACACCGCGACGTCTAGATAGATATAGATATATATATATATATATATCCATGCTAGC 648
Hordeum GACAGCACTGAGCCGCCGGCTCCGGCTGGCTGCTTTCTTTGCATAGCTACGCGTCGAAGC 1205
** *
Capsicum GTGGCGGAGCACGAGGCGGAGGGGAAGGAGAAGAAGGGATTTTTGGACAAGATTAAGGAG 676
Coffea GCACCGCCAC-TGAAGGTGAGGCCAAGGATAAGAAGGGATTCTTGGACAAGATCAAGGAG 654
Solanum GCGGTGGACCATGAGGCGGAGGGGAAGGAGAAAAAGGGATTTTTGGACAAAATTAAGGAG 1718
Arabidopsis CCTCCTGTGGAAGAAGCGCATCCAGTGGAGAAGAAAGGGATTCTTGAGAAGATTAAGGAG 594
Ammopiptanthus GCTGCCTTTT-AAATATATAAACTTTGAATAATTTGCTAGCTGCCAACTTAATATATATA 707
Hordeum CTTCCAGTTCCACGTG-ATCTTCATTCAATAATAAGATGAAGCTGAACGAAACGTTGCCT 1264
* ** * *
Capsicum AAATTGCCAGG-GTATCACT--CAAAGACTGAAGAGGAAAAGGAAAAAGAAAA---AGAA 730
Coffea AAGCTCCCTGG-CTACCATC--CCAAGACTGAAGAAGAGAAGGAAAAGGAGAA---GGAA 708
Solanum AAATTACCAGG-ATACCACT--CAAAGACTGAAGAGGAAAAGGAGAAGGAAAA---AGAC 1772
Arabidopsis AAGCTTCCAGG-ATACCACC--CTAAGACCACCGTAGAGGAGGAGAAGAAAGA---TAAA 648
Ammopiptanthus TATATACTATC-ATGTCATG--TAATGAT--GTGAATAATGGAAGATATACTT---TATA 759
Hordeum CTGATTTCATCTGTGTCGGGGACACTTTTCTGTATACAGCGTGCGTTGTGTTTATGTTTG 1324
* * * *
Capsicum -GCAGCATCTCACTAAGTAATTAAAG-------TTGATAGCATGGGAA--TGA-ATGTTT 779
Coffea -AAAGAAAAGGA--GGCTGGATGCCA-------TTAATAAAAGAGCAA--AGC-AAATTA 755
Solanum TAAATTAAATGAATGTTTATTTGTTGATG---TTTTTTACTTTTGGGA--TGTTATGATT 1827
Arabidopsis -GAATAAGAAGATTA--TCATTAAAGA------TATTAAGAATAATGA--TGGTTGATTT 697
Ammopiptanthus TATATTGATATGTAGTATAGATAGAAGAA---TAAAAAGGCACATGCA--TGCTGTCGGT 814
Hordeum TGTGTTCTTGTGTCTTCTTGCTGAAAAAAAATTCAGAATACAAGTGAACTTGTTTCGGTT 1384
* * * *
Capsicum -ATTTGT-----TGCTTTTTTGAACTTTTGGTATGTTATGATT-GTGGTGTTCTGTTGTT 832
Coffea -ATA-GC-----AGCTTTCC---------AGTGTGTCATAATT--TTGCATTTGG--ATT 795
Solanum -GTGTTTCTA--TGTTGTTTTGGTTTTTAAGTGTTTTTCATTT-CCTTCACTTTGTTTTT 1883
Arabidopsis -GCT-TTGTT--TTTTTTTTTTTTATTGTGATGATTGATCATC-TTTTGCTTTTGTGATG 752
Ammopiptanthus -GTTTCTGTTGTAGCTGAAACAAAAAGTGGAATTGTTGTGCCC-TGTGTATAGGGAGACA 872
Hordeum CGTTCTTTCTTTCTTTCTTTTTTTTTGCGAATCAACTGAACTTGTTTCTCTGACAAAGGA 1444
*
Capsicum TTTGGATTTTGAAGGAT-GTT----ATAAGTGCTGTATT-TTGATATTTCTAT---ATGT 883
Coffea AATACATTTTGGAGTG--GCA----ATGATCTTTTTATT-TTAAAAA------------- 835
Solanum TTTGGATTTTGAAGGATAATT----GTTAGTACTGTATT-T-GATATTTCTGT---ATGT 1934
Arabidopsis TGTAAGTTTGTTGGCTTTTTT----GTTG--ATTACAAT-TTCTTATTTTCTC---TTGT 802
Ammopiptanthus TGTAAGCATGCGAAGTT-GTT----GTGGCCTCCAGATC-TGGGCACCCTGAT---CAGT 923
Hordeum AATCAGGCCCTTATGTCTGTCCAACGAAGGACCAATGTCATTTTTACCCTTGCACCCAGA 1504
* * *
Capsicum AAGTAGCAGCATCTCACTAAATAATTAAA-GTTGATAGCA-TGGGAATGAATGTTTATTT 941
Coffea ------------------------------------------------------------
Solanum AAGTGCATATATGTGCCTTATGTGTATGA-AGTTTGATAA-TATGGATTTGTAAAATGCA 1992
Arabidopsis ATATGGTTTTTAAAAACAAAAGATCTCAA-GGTATTTTAA-TG-GTATGAATATT-TTCA 858
Ammopiptanthus ATGTACCTTAATTTCACTTGGTTTTACAGTGATTAGTTGT-TGTTGTTGTGTAGTATAAA 982
Hordeum ACGTATGTTCTACTCCCTCCGTTACTAAATATAAGTCTATATGTTCTAGTATGTTGTACA 1564
Capsicum GTTGCTTTTTTGAACTTTTGGTATGTTATGATTGTGGTGTTCTGTTGTTTTTGGATTTTG 1001
Coffea ------------------------------------------------------------
Solanum GTTGATTTTATC--CTCTTGATCTCTTGT---TTTATGGTTTAGTTGTATC---ATTTCC 2044
Arabidopsis TTTGAAAAAAAGAAAAAAAAAAAAAAAA-------------------------------- 886
Ammopiptanthus AAAAAAAAAAAAAAAAAAAAAAAAAA---------------------------------- 1008
Hordeum CAAAGTAGAAAGCATGCTGGTGCAAAACGAAAAGAGCAACAGTTACATCTTCTAAAAAAA 1624
Capsicum AAGGATGTTATAAGTGCTGCATTTTGATATTTCTATATGTAAGTGCATAGTTTTATGTGT 1061
Coffea ------------------------------------------------------------
Solanum AACTATGTTATATGAAAACATATTGATATACGACAGTTTTTAGTTAGTGGTCATGTATTT 2104
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------------------------------------------
Hordeum AAGCATGCTGGTGCAAAACGAAAAGAGCAACAGTTACATCTTCTAAAAAAAATTGCGGAA 1684
Capsicum ACTTTGATGGTATGGATTTGTAAAATGCAGTGATTTTGATTTCAAAAAAAAAAAAAAAA- 1120
Coffea ------------------------------------------------------------
Solanum ACATTGTGAG-------------------------------------------------- 2114
Arabidopsis ------------------------------------------------------------
Ammopiptanthus ------------------------------------------------------------
Hordeum ACATCGACTATAGCTAGCATTTGGTTTACCCCAATTATCATGACTATGTTAATATCTATG 1744
Capsicum -----------------------------------------------
Coffea -----------------------------------------------
Solanum -----------------------------------------------
Arabidopsis -----------------------------------------------
Ammopiptanthus -----------------------------------------------
Hordeum ACGCTTTTGGATGTCTCATGTCCAAATAAATGGTCATATACTCGATA 1791
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