About 11 entries found Sl.No Contigs SSR Repeat Type SSR Repeats 1 defencerelated.fasta.Contig57 dinucleotide TCTCTCTCTCCCTCTCTCTCTCT 2 beanandleaf.fasta.Contig284 dinucleotide ATATATATATATATATATATAT 3 beanandleaf.fasta.Contig320 dinucleotide CTCTCTCTCTCTCTCTCTCTCT 4 beanandleaf.fasta.Contig205 pentanucleotide ACCAAACCAAACCAAACCAAAC 5 defencerelated.fasta.Contig53 tetranucleotide GTATGTATGTATGTATGTAT 6 defencerelated.fasta.Contig262 tetranucleotide ATAAATAAATAAATAAATAA 7 beanandleaf.fasta.Contig316 trinucleotide GAAGAAGAAGAAGAAGAAGAAGAAGA 8 beanandleaf.fasta.Contig280 trinucleotide CTGCTGCTGTTGCTGCTGCTGCT 9 beanandleaf.fasta.Contig72 trinucleotide AACAACAACAACAACAACAACAA 10 beanandleaf.fasta.Contig376 trinucleotide CTGCTGCTGCTGCTGCTGCT 11 beanandleaf.fasta.Contig314 trinucleotide AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA

The Computational analysis of Cocoa contigs - SSR by SSR Primer (Robinson et al . 2004 )

SSR type Total Percentage Dinucleotide 3 27.27% Trinucleotide 5 45.45% Tetranucleotide 2 18.18% Pentanucleotide 1 9.09% Total number of sequences analyzed: 769 Total number of SSRs found in sequences: 11