Untitled Document
Sl.NO Accession NO SSR Type SSR Length
1 CN599509MonomerA23
2 BM402088MonomerA21
3 CN599380MonomerA49
4 CN600162MonomerA46
5 CN600010MonomerA44
6 CN600763MonomerT21
7 CN599956MonomerT21
8 CN599820MonomerT21
9 CN600286MonomerT21
10 CN601533MonomerT21
11 CN601115MonomerT21
12 CN599439MonomerT21
13 CN600108MonomerT21
14 CN600447MonomerT21
15 CN599374MonomerT21
16 CN600248MonomerT21
17 CN600093MonomerT21
18 CN600014MonomerT21
19 CN600217MonomerT22
20 CN600509MonomerT22
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The in silico analysis of Oil Palm EST - SSR by TRA (Bilgen. et al. 2004)

 

SSR type
TOTAL
Percentage

Monomer

84

63.63%

Dimer

30

22.72%

Trimer

10

7.57%

Tetramer

1

0.75%

Pentamer

0

0.00%

Hexamer

5

3.78%

Nanomer

1

0.75%

Above decamer

1

0.75%

Total number of sequences analyzed: 2413

Total number of SSRs found in sequences: 132

The mononucleotide 'T' has repeated 79 (59.84%) pf the total SSR

 

COCOA
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
OIL PALM
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
 
SSR WEB TOOLS