Untitled Document
Sl.NO Accession NO SSR Type SSR Length
1 CN600861MonomerT22
2 CN599876MonomerT22
3 CN601032MonomerT22
4 CN600168MonomerT22
5 CN599672MonomerT23
6 CN600129MonomerT23
7 CN599485MonomerT24
8 CN601514MonomerT24
9 CN600188MonomerT25
10 CN599648MonomerT25
11 CN599991MonomerT25
12 CN600343MonomerT26
13 CN600483MonomerT26
14 CN600501MonomerT26
15 CN599958MonomerT27
16 CN599896MonomerT28
17 CN600374MonomerT28
18 CN599589MonomerT28
19 CN599911MonomerT29
20 CN600287MonomerT29
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The in silico analysis of Oil Palm EST - SSR by TRA (Bilgen. et al. 2004)

 

SSR type
TOTAL
Percentage

Monomer

84

63.63%

Dimer

30

22.72%

Trimer

10

7.57%

Tetramer

1

0.75%

Pentamer

0

0.00%

Hexamer

5

3.78%

Nanomer

1

0.75%

Above decamer

1

0.75%

Total number of sequences analyzed: 2413

Total number of SSRs found in sequences: 132

The mononucleotide 'T' has repeated 79 (59.84%) pf the total SSR

 

COCOA
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
OIL PALM
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
 
SSR WEB TOOLS