Untitled Document
Sl.NO Accession NO SSR Type SSR Length
1 CN599896MonomerT29
2 CN599991MonomerT30
3 CN600251MonomerT30
4 CN600407MonomerT31
5 CN599631MonomerT32
6 CN599568MonomerT32
7 CN600581MonomerT32
8 CN599435MonomerT33
9 CN600274MonomerT33
10 CN600558MonomerT34
11 CN599904MonomerT34
12 CN600457MonomerT34
13 CN599537MonomerT35
14 CN599568MonomerT36
15 CN600117MonomerT36
16 CN600604MonomerT39
17 CN600017MonomerT39
18 CN599436MonomerT40
19 CN601639MonomerT40
20 CN600012MonomerT42
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The in silico analysis of Oil Palm EST - SSR by TRA (Bilgen. et al. 2004)

 

SSR type
TOTAL
Percentage

Monomer

84

63.63%

Dimer

30

22.72%

Trimer

10

7.57%

Tetramer

1

0.75%

Pentamer

0

0.00%

Hexamer

5

3.78%

Nanomer

1

0.75%

Above decamer

1

0.75%

Total number of sequences analyzed: 2413

Total number of SSRs found in sequences: 132

The mononucleotide 'T' has repeated 79 (59.84%) pf the total SSR

 

COCOA
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
OIL PALM
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
 
SSR WEB TOOLS