Untitled Document
Sl.NO Accession NO SSR Type SSR Length
1 CN599648MonomerT42
2 CN600161MonomerT43
3 CN599998MonomerT43
4 CN599872MonomerT44
5 CN601364MonomerT46
6 CN599945MonomerT47
7 CN600385MonomerT47
8 CN600631MonomerT47
9 CN600580MonomerT48
10 CN599412MonomerT48
11 CN599635MonomerT49
12 CN599622MonomerT52
13 CN600092MonomerT52
14 CN600905MonomerT55
15 CN599459MonomerT56
16 CN599981MonomerT57
17 CN600075 MonomerT59
18 CN599426MonomerT61
19 CN599900MonomerT62
20 CN600180MonomerT63
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The in silico analysis of Oil Palm EST - SSR by TRA (Bilgen. et al. 2004)

 

SSR type
TOTAL
Percentage

Monomer

84

63.63%

Dimer

30

22.72%

Trimer

10

7.57%

Tetramer

1

0.75%

Pentamer

0

0.00%

Hexamer

5

3.78%

Nanomer

1

0.75%

Above decamer

1

0.75%

Total number of sequences analyzed: 2413

Total number of SSRs found in sequences: 132

The mononucleotide 'T' has repeated 79 (59.84%) pf the total SSR

 

COCOA
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
OIL PALM
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
 
SSR WEB TOOLS