Untitled Document
Sl.NO Accession NO SSR Type SSR Length
1 CN601046MonomerT67
2 CN599391MonomerT71
3 CN600117 MonomerT86
4 CN599917MonomerT106
5 CN599947DIMERAG10
6 CN600775DIMERAG11
7 CN600833DIMERAG11
8 CN601054DIMERAG16
9 CN600084DIMERAG16
10 CN601086DIMERAG17
11 CN599387DIMERAG20
12 CN600527DIMERAG20
13 CN599977DIMERAG25
14 CN601735DIMERAG35
15 CN599614DIMERAT10
16 CN599573DIMERAT12
17 CN600575DIMERAT16
18 CN599504DIMERCT10
19 CN600785DIMERCT10
20 CN600177DIMERCT10
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The in silico analysis of Oil Palm EST - SSR by TRA (Bilgen. et al. 2004)

 

SSR type
TOTAL
Percentage

Monomer

84

63.63%

Dimer

30

22.72%

Trimer

10

7.57%

Tetramer

1

0.75%

Pentamer

0

0.00%

Hexamer

5

3.78%

Nanomer

1

0.75%

Above decamer

1

0.75%

Total number of sequences analyzed: 2413

Total number of SSRs found in sequences: 132

The mononucleotide 'T' has repeated 79 (59.84%) pf the total SSR

 

COCOA
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
OIL PALM
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
 
SSR WEB TOOLS